Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- golgi 5
- extracellular 7
- endoplasmic reticulum 5
- plasma membrane 5
- vacuole 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra025798.1-P | Field mustard | extracellular, plasma membrane | 86.61 | 87.75 |
| CDY44210 | Canola | extracellular | 87.78 | 87.44 |
| AT1G20150.1 | Thale cress | extracellular, golgi, vacuole | 50.72 | 50.0 |
| AT5G58840.1 | Thale cress | extracellular, plasma membrane, vacuole | 37.84 | 40.81 |
| AT5G59190.1 | Thale cress | plastid | 36.15 | 40.12 |
| AT5G59100.1 | Thale cress | extracellular, vacuole | 38.62 | 40.08 |
| AT5G58830.1 | Thale cress | vacuole | 36.8 | 39.86 |
| AT5G58820.1 | Thale cress | vacuole | 36.41 | 39.83 |
| AT5G59090.1 | Thale cress | extracellular | 37.58 | 39.27 |
| AT5G59120.1 | Thale cress | extracellular | 37.06 | 38.93 |
| AT4G00230.1 | Thale cress | extracellular, plasma membrane | 37.84 | 38.85 |
| AT3G46850.1 | Thale cress | extracellular, plasma membrane, vacuole | 37.06 | 38.72 |
| AT5G59130.4 | Thale cress | extracellular, plasma membrane | 36.93 | 38.59 |
| AT1G32950.1 | Thale cress | extracellular, golgi | 38.1 | 37.9 |
| AT4G15040.1 | Thale cress | cytosol | 33.68 | 37.7 |
| AT3G46840.1 | Thale cress | extracellular, plasma membrane | 36.15 | 37.67 |
| AT4G10540.1 | Thale cress | extracellular, plasma membrane | 37.71 | 37.42 |
| AT4G10510.3 | Thale cress | extracellular, plasma membrane | 37.58 | 37.19 |
| AT4G10550.3 | Thale cress | mitochondrion | 38.36 | 37.15 |
| AT1G32940.1 | Thale cress | extracellular, plasma membrane, vacuole | 37.19 | 36.95 |
| AT1G66210.1 | Thale cress | extracellular, plasma membrane | 36.41 | 36.89 |
| AT5G03620.1 | Thale cress | extracellular | 36.67 | 36.81 |
| AT4G10520.1 | Thale cress | plasma membrane | 36.15 | 36.77 |
| AT1G32960.1 | Thale cress | extracellular, plasma membrane | 37.06 | 36.68 |
| AT4G26330.1 | Thale cress | cytosol | 35.37 | 36.46 |
| AT1G66220.1 | Thale cress | extracellular, plasma membrane | 34.98 | 35.72 |
| AT4G21326.1 | Thale cress | cytosol | 32.12 | 35.59 |
| AT4G10530.1 | Thale cress | plasma membrane | 34.46 | 35.48 |
| AT4G21650.1 | Thale cress | extracellular, vacuole | 35.11 | 35.25 |
| AT4G21640.1 | Thale cress | extracellular, vacuole | 33.42 | 35.06 |
| AT4G21630.1 | Thale cress | extracellular, plasma membrane | 34.33 | 34.78 |
| AT5G11940.1 | Thale cress | extracellular, plasma membrane | 33.55 | 33.86 |
| AT1G32970.1 | Thale cress | extracellular | 30.82 | 32.29 |
| AT4G21323.1 | Thale cress | extracellular, vacuole | 33.68 | 32.25 |
| AT2G39850.1 | Thale cress | extracellular | 32.38 | 32.13 |
Protein Annotations
| MapMan:19.4.2.1.5 | Gene3D:2.60.40.2310 | Gene3D:3.30.70.80 | Gene3D:3.40.50.200 | Gene3D:3.50.30.30 | EntrezGene:838606 |
| ProteinID:AAF79897.1 | ProteinID:AEE29945.1 | ProteinID:AEE29946.1 | EMBL:AK228874 | ArrayExpress:AT1G20160 | EnsemblPlantsGene:AT1G20160 |
| RefSeq:AT1G20160 | TAIR:AT1G20160 | RefSeq:AT1G20160-TAIR-G | EnsemblPlants:AT1G20160.1 | TAIR:AT1G20160.1 | Symbol:ATSBT5.2 |
| EMBL:AY087872 | Unigene:At.24841 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004252 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005623 | GO:GO:0006508 |
| GO:GO:0006950 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 | GO:GO:0008236 |
| GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009791 | GO:GO:0010037 | GO:GO:0016787 | GO:GO:0019538 |
| GO:GO:0030312 | GO:GO:0048046 | GO:GO:1900425 | GO:GO:2000038 | GO:GO:2000122 | InterPro:IPR036852 |
| InterPro:IPR037045 | RefSeq:NP_001031070.1 | RefSeq:NP_564107.1 | PFAM:PF00082 | PFAM:PF05922 | PO:PO:0000013 |
| PO:PO:0000036 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0003011 | PO:PO:0004507 | PO:PO:0005352 | PO:PO:0007064 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009074 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PRINTS:PR00723 | ScanProsite:PS00137 | ScanProsite:PS00138 | PANTHER:PTHR10795 | PANTHER:PTHR10795:SF520 | InterPro:Peptidase_S8/S53_dom |
| InterPro:Peptidase_S8/S53_dom_sf | InterPro:Peptidase_S8_His-AS | InterPro:Peptidase_S8_Ser-AS | InterPro:Peptidase_S8_subtilisin-rel | InterPro:Peptidases_S8_3 | UniProt:Q9LNU1 |
| MEROPS:S08.A22 | InterPro:S8pro/Inhibitor_I9 | InterPro:S8pro/Inhibitor_I9_sf | SUPFAM:SSF52743 | SignalP:SignalP-noTM | UniParc:UPI00000A8B89 |
| SEG:seg | : | : | : | : | : |
Description
CRSPCO(2)-response secreted protease [Source:UniProtKB/Swiss-Prot;Acc:Q9LNU1]
Coordinates
chr1:-:6990642..6993989
Molecular Weight (calculated)
81484.4 Da
IEP (calculated)
5.823
GRAVY (calculated)
-0.159
Length
769 amino acids
Sequence
(BLAST)
(BLAST)
001: MKGITFFTPF LSFLYLLCIL FMTETEAGSR NGDGVYIVYM GSASSAANAN RAQILINTMF KRRANDLLHT YKHGFSGFAA RLTAEEAKVI AKKPGVVSVF
101: PDPHFQLHTT HSWDFLKYQT SVKVDSGPPS SASDGSYDSI VGILDTGIWP ESESFNDKDM GPIPSRWKGT CMEAKDFKSS NCNRKIIGAR YYKNPDDDSE
201: YYTTRDVIGH GSHVSSTIAG SAVENASYYG VASGTAKGGS QNARIAMYKV CNPGGCTGSS ILAAFDDAIA DGVDVLSLSL GAPAYARIDL NTDPIAIGAF
301: HAVEQGILVI CSAGNDGPDG GTVTNTAPWI MTVAANTIDR DFESDVVLGG NKVIKGEGIH FSNVSKSPVY PLIHGKSAKS ADASEGSARA CDSDSLDQEK
401: VKGKIVLCEN VGGSYYASSA RDEVKSKGGT GCVFVDDRTR AVASAYGSFP TTVIDSKEAA EIFSYLNSTK DPVATILPTA TVEKFTPAPA VAYFSSRGPS
501: SLTRSILKPD ITAPGVSILA AWTGNDSSIS LEGKPASQYN VISGTSMAAP HVSAVASLIK SQHPTWGPSA IRSAIMTTAT QTNNDKGLIT TETGATATPY
601: DSGAGELSST ASMQPGLVYE TTETDYLNFL CYYGYNVTTI KAMSKAFPEN FTCPADSNLD LISTINYPSI GISGFKGNGS KTVTRTVTNV GEDGEAVYTV
701: SVETPPGFNI QVTPEKLQFT KDGEKLTYQV IVSATASLKQ DVFGALTWSN AKYKVRSPIV ISSESSRTN
101: PDPHFQLHTT HSWDFLKYQT SVKVDSGPPS SASDGSYDSI VGILDTGIWP ESESFNDKDM GPIPSRWKGT CMEAKDFKSS NCNRKIIGAR YYKNPDDDSE
201: YYTTRDVIGH GSHVSSTIAG SAVENASYYG VASGTAKGGS QNARIAMYKV CNPGGCTGSS ILAAFDDAIA DGVDVLSLSL GAPAYARIDL NTDPIAIGAF
301: HAVEQGILVI CSAGNDGPDG GTVTNTAPWI MTVAANTIDR DFESDVVLGG NKVIKGEGIH FSNVSKSPVY PLIHGKSAKS ADASEGSARA CDSDSLDQEK
401: VKGKIVLCEN VGGSYYASSA RDEVKSKGGT GCVFVDDRTR AVASAYGSFP TTVIDSKEAA EIFSYLNSTK DPVATILPTA TVEKFTPAPA VAYFSSRGPS
501: SLTRSILKPD ITAPGVSILA AWTGNDSSIS LEGKPASQYN VISGTSMAAP HVSAVASLIK SQHPTWGPSA IRSAIMTTAT QTNNDKGLIT TETGATATPY
601: DSGAGELSST ASMQPGLVYE TTETDYLNFL CYYGYNVTTI KAMSKAFPEN FTCPADSNLD LISTINYPSI GISGFKGNGS KTVTRTVTNV GEDGEAVYTV
701: SVETPPGFNI QVTPEKLQFT KDGEKLTYQV IVSATASLKQ DVFGALTWSN AKYKVRSPIV ISSESSRTN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.