Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plasma membrane 1
- extracellular 2
- endoplasmic reticulum 1
- golgi 2
- vacuole 1
- plastid 1
- mitochondrion 4
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY66640 | Canola | cytosol | 64.23 | 74.51 |
| Bra026639.1-P | Field mustard | cytosol | 63.66 | 72.2 |
| CDY09423 | Canola | cytosol | 63.1 | 71.57 |
| KRH62217 | Soybean | cytosol, nucleus | 38.87 | 56.1 |
| VIT_18s0001g07450.t01 | Wine grape | cytosol | 44.79 | 50.0 |
| KRH72458 | Soybean | nucleus | 43.94 | 44.83 |
| KRH16845 | Soybean | nucleus | 42.25 | 41.21 |
| Solyc04g076270.1.1 | Tomato | nucleus | 40.0 | 38.17 |
| PGSC0003DMT400024179 | Potato | cytosol | 39.44 | 37.53 |
| AT5G09540.1 | Thale cress | nucleus | 27.89 | 35.36 |
| AT5G64360.7 | Thale cress | nucleus | 31.83 | 24.35 |
| AT1G62970.1 | Thale cress | nucleus | 30.7 | 13.68 |
Protein Annotations
| Gene3D:1.10.287.110 | MapMan:12.5.1.16.2 | EntrezGene:814700 | UniProt:A0A1P8B2U5 | ProteinID:AAD12700.1 | ProteinID:AEC05487.1 |
| ProteinID:ANM63225.1 | ArrayExpress:AT2G01710 | EnsemblPlantsGene:AT2G01710 | RefSeq:AT2G01710 | TAIR:AT2G01710 | RefSeq:AT2G01710-TAIR-G |
| EnsemblPlants:AT2G01710.2 | EMBL:AY052228 | EMBL:AY139811 | Unigene:At.13463 | InterPro:DnaJ_domain | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | InterPro:IPR001623 | InterPro:IPR036869 |
| InterPro:J_dom_sf | RefSeq:NP_001325329.1 | RefSeq:NP_565276.1 | PFAM:PF00226 | PRINTS:PR00625 | PFscan:PS50076 |
| PANTHER:PTHR45496 | SMART:SM00271 | SUPFAM:SSF46565 | UniParc:UPI0008494FDA | SEG:seg | : |
Description
Chaperone DnaJ-domain superfamily protein [Source:TAIR;Acc:AT2G01710]
Coordinates
chr2:+:315648..316993
Molecular Weight (calculated)
39558.0 Da
IEP (calculated)
8.990
GRAVY (calculated)
-0.441
Length
355 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLFFFPRPF LHTANQSLVS SSLVEAIIFR SAHHFSAIAD GRRKMGDNNP NRSEAERLLG IAEKLLESRD LNGSKEFAIL AQETEPLLEG TDQILAVVDV
101: LLSSAPENRI KNQPNWYKIL QIEDLTESST DNDLIKKQYR RLALLLHPDK NRFPFADQAF RFVLDAWEVL STPTKKSQFD GDLNLIFTKV NLNTQKSKKK
201: TTTNEKMSTF WTACPYCYSL HEYPRVYQEY CIRCQNCQRA FHAASIPQLP PLIPGKDEYY CCWGFFPMGF VGGKGGEAAI ANGVDAAKFP NWMPPVFSSG
301: GVAAPPSGNG VSFDGWSGGA AKRDNEAVRS NNGVGVNSDG TPKKRGRGRP KKNPV
101: LLSSAPENRI KNQPNWYKIL QIEDLTESST DNDLIKKQYR RLALLLHPDK NRFPFADQAF RFVLDAWEVL STPTKKSQFD GDLNLIFTKV NLNTQKSKKK
201: TTTNEKMSTF WTACPYCYSL HEYPRVYQEY CIRCQNCQRA FHAASIPQLP PLIPGKDEYY CCWGFFPMGF VGGKGGEAAI ANGVDAAKFP NWMPPVFSSG
301: GVAAPPSGNG VSFDGWSGGA AKRDNEAVRS NNGVGVNSDG TPKKRGRGRP KKNPV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.