Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol, cytoskeleton
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G73100.1 | Thale cress | nucleus | 50.64 | 23.62 |
| AT5G04940.2 | Thale cress | nucleus | 48.08 | 22.39 |
| AT1G17770.1 | Thale cress | nucleus | 47.44 | 21.36 |
| Os12t0128450-00 | Rice | nucleus | 41.03 | 20.85 |
| Zm00001d010646_P001 | Maize | plastid | 41.03 | 19.63 |
| TraesCS5A01G140500.1 | Wheat | nucleus | 42.63 | 19.5 |
| TraesCS4B01G280000.1 | Wheat | nucleus | 45.19 | 19.45 |
| Os11t0131600-00 | Rice | nucleus | 41.35 | 19.43 |
| TraesCS5D01G152000.1 | Wheat | nucleus | 42.63 | 19.33 |
| TraesCS1B01G378900.1 | Wheat | nucleus | 41.35 | 19.14 |
| TraesCS1D01G366800.1 | Wheat | nucleus | 41.35 | 19.08 |
| TraesCS3A01G385200.1 | Wheat | plastid | 44.23 | 19.01 |
| Os05t0490700-01 | Rice | extracellular | 40.71 | 18.9 |
| TraesCS5B01G138800.1 | Wheat | nucleus | 42.95 | 18.87 |
| TraesCS1A01G362000.1 | Wheat | nucleus | 40.71 | 18.79 |
| TraesCS1B01G319000.1 | Wheat | nucleus | 40.38 | 18.69 |
| EES19725 | Sorghum | nucleus | 40.38 | 18.69 |
| AT2G24740.1 | Thale cress | nucleus | 44.87 | 18.54 |
| Zm00001d038541_P002 | Maize | nucleus | 40.71 | 18.35 |
| TraesCS1D01G307700.1 | Wheat | nucleus | 39.42 | 18.25 |
| TraesCS1A01G308300.1 | Wheat | nucleus | 39.42 | 18.25 |
| GSMUA_Achr5P27620_001 | Banana | nucleus | 35.9 | 18.12 |
| Os11t0602200-01 | Rice | nucleus | 46.15 | 17.71 |
| EES10399 | Sorghum | nucleus | 45.83 | 17.46 |
| Zm00001d041005_P001 | Maize | nucleus | 39.1 | 17.45 |
| OQU78645 | Sorghum | nucleus | 41.67 | 17.43 |
| Os01t0811300-01 | Rice | nucleus, plasma membrane | 41.03 | 17.39 |
| TraesCS4D01G278500.1 | Wheat | nucleus | 45.19 | 17.22 |
| TraesCS3B01G417400.1 | Wheat | nucleus | 45.83 | 17.17 |
| EER96081 | Sorghum | nucleus | 45.51 | 17.11 |
| TraesCS4A01G023500.1 | Wheat | nucleus | 45.19 | 16.91 |
| Zm00001d019195_P001 | Maize | nucleus | 46.15 | 16.82 |
| EES01635 | Sorghum | nucleus | 39.74 | 16.71 |
| TraesCS3B01G366900.1 | Wheat | nucleus | 39.74 | 16.69 |
| TraesCS3B01G367200.1 | Wheat | nucleus | 39.74 | 16.69 |
| TraesCS3A01G336100.1 | Wheat | nucleus | 39.74 | 16.64 |
| TraesCS3D01G329100.1 | Wheat | nucleus | 39.42 | 16.55 |
| Zm00001d043135_P003 | Maize | nucleus | 39.74 | 15.92 |
| AT5G13960.1 | Thale cress | nucleus | 31.09 | 15.54 |
| AT2G33290.2 | Thale cress | nucleus | 31.73 | 15.21 |
| AT4G13460.2 | Thale cress | nucleus | 31.09 | 14.92 |
| AT5G47150.1 | Thale cress | cytosol | 14.74 | 14.02 |
| TraesCS3D01G378200.1 | Wheat | plastid | 29.81 | 13.58 |
| AT2G35160.3 | Thale cress | nucleus | 33.65 | 13.22 |
| AT2G22740.1 | Thale cress | nucleus | 31.73 | 12.53 |
| AT3G03750.2 | Thale cress | nucleus | 14.1 | 12.43 |
| AT5G47160.1 | Thale cress | mitochondrion | 14.74 | 11.08 |
| AT3G04380.1 | Thale cress | nucleus | 14.1 | 8.94 |
| AT5G43990.9 | Thale cress | nucleus | 17.63 | 7.43 |
| AT1G04050.1 | Thale cress | nucleus | 15.38 | 6.54 |
| AT2G23740.2 | Thale cress | nucleus | 16.03 | 3.62 |
Protein Annotations
| Gene3D:2.170.270.10 | Gene3D:2.30.280.10 | MapMan:35.1 | EntrezGene:815142 | ProteinID:AAC95167.1 | ProteinID:AEC05982.1 |
| ArrayExpress:AT2G05900 | EnsemblPlantsGene:AT2G05900 | RefSeq:AT2G05900 | TAIR:AT2G05900 | RefSeq:AT2G05900-TAIR-G | EnsemblPlants:AT2G05900.1 |
| TAIR:AT2G05900.1 | Unigene:At.41135 | GO:GO:0000775 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005694 |
| GO:GO:0006325 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009987 |
| GO:GO:0016043 | GO:GO:0016569 | GO:GO:0016740 | GO:GO:0018024 | GO:GO:0019538 | GO:GO:0034968 |
| GO:GO:0046872 | InterPro:IPR001214 | InterPro:IPR003105 | InterPro:IPR036987 | RefSeq:NP_178647.1 | PFAM:PF00856 |
| PFAM:PF02182 | PFscan:PS50280 | PFscan:PS51015 | PANTHER:PTHR22884 | PANTHER:PTHR22884:SF415 | InterPro:PUA-like_sf |
| UniProt:Q3EC60 | Symbol:SDG11 | InterPro:SET_dom | SMART:SM00317 | SMART:SM00466 | InterPro:SRA-YDG_sf |
| InterPro:SRA_YDG | SUPFAM:SSF82199 | SUPFAM:SSF88697 | UniParc:UPI00000A9CFD | : | : |
Description
SUVH10Putative inactive histone-lysine N-methyltransferase family member SUVH10 [Source:UniProtKB/Swiss-Prot;Acc:Q3EC60]
Coordinates
chr2:+:2256970..2257908
Molecular Weight (calculated)
35025.3 Da
IEP (calculated)
8.776
GRAVY (calculated)
-0.349
Length
312 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLVGLHSGT IDMEFIGVED HGDEEGKQIA VSVISSGKNA DKTEDPDSLI FTGFGGTDMY HGQPCNQKLE RLNIPLEAAF RKKSIVRVVR CMKDEKRTNG
101: NIYIYDGTYM ITNRWEEEGQ NGFIVFKFKL VREPDQKPAF GIWKSIQNWR NGLSIRPGLI LEDLSNGAEN LKVCLVNEVD KENGPALFRY VTSLIHEVIN
201: NIPSMVDRCA CGRRSCGSKH VFREKLSVSS SLVISAKKSG NVARFMNHSC SPNVFWQSIA REQNGLWCLY IGFFAMKHIP PLTELRYDYG KSRGGGKKMC
301: LCRTKKCCGS FG
101: NIYIYDGTYM ITNRWEEEGQ NGFIVFKFKL VREPDQKPAF GIWKSIQNWR NGLSIRPGLI LEDLSNGAEN LKVCLVNEVD KENGPALFRY VTSLIHEVIN
201: NIPSMVDRCA CGRRSCGSKH VFREKLSVSS SLVISAKKSG NVARFMNHSC SPNVFWQSIA REQNGLWCLY IGFFAMKHIP PLTELRYDYG KSRGGGKKMC
301: LCRTKKCCGS FG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.