Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- golgi 5
- endoplasmic reticulum 6
- extracellular 5
- plasma membrane 5
- vacuole 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY18576 | Canola | endoplasmic reticulum, plasma membrane | 73.88 | 76.79 |
| CDX81428 | Canola | endoplasmic reticulum, plasma membrane | 66.32 | 75.39 |
| Bra037196.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 65.29 | 74.8 |
| Solyc07g007860.1.1 | Tomato | extracellular | 29.21 | 61.59 |
| PGSC0003DMT400079355 | Potato | extracellular | 28.18 | 59.85 |
| KRH03647 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 35.05 | 53.68 |
| KRH20158 | Soybean | endoplasmic reticulum | 40.21 | 51.54 |
| VIT_11s0016g05840.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 43.64 | 47.74 |
| Zm00001d002094_P001 | Maize | extracellular, plastid | 31.62 | 45.32 |
| Zm00001d026436_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 27.84 | 39.71 |
| AT1G62500.1 | Thale cress | extracellular | 38.83 | 38.05 |
| Os04t0644400-01 | Rice | nucleus | 23.37 | 37.36 |
| EES12957 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 27.84 | 37.33 |
| AT4G15160.1 | Thale cress | extracellular | 35.05 | 37.09 |
| TraesCS2A01G518100.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 32.99 | 32.88 |
| TraesCS2D01G519700.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 32.65 | 32.87 |
| TraesCS2B01G546700.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 31.27 | 32.5 |
| AT3G22120.2 | Thale cress | plastid | 36.08 | 29.91 |
| HORVU2Hr1G114680.2 | Barley | endoplasmic reticulum | 28.52 | 19.81 |
| AT3G22142.1 | Thale cress | extracellular, plasma membrane, vacuole | 31.62 | 6.22 |
Protein Annotations
| Gene3D:1.10.110.10 | MapMan:35.2 | EntrezGene:815558 | ProteinID:AAD26911.1 | ProteinID:AEC06157.1 | ProteinID:AEC06158.1 |
| ArrayExpress:AT2G10940 | EnsemblPlantsGene:AT2G10940 | RefSeq:AT2G10940 | TAIR:AT2G10940 | RefSeq:AT2G10940-TAIR-G | EnsemblPlants:AT2G10940.2 |
| TAIR:AT2G10940.2 | EMBL:AY065178 | EMBL:AY127013 | Unigene:At.26731 | EMBL:BT000557 | InterPro:Bifun_inhib/LTP/seed_sf |
| InterPro:Bifunc_inhib/LTP/seed_store | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0009506 | GO:GO:0009507 | GO:GO:0009535 | GO:GO:0009536 | GO:GO:0009579 | GO:GO:0016020 |
| GO:GO:0048046 | InterPro:Hydrophob_seed | RefSeq:NP_565348.1 | RefSeq:NP_849949.1 | PFAM:PF14547 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR31731 | PANTHER:PTHR31731:SF54 |
| UniProt:Q9SKI0 | SMART:SM00499 | SUPFAM:SSF47699 | SignalP:SignalP-noTM | UniParc:UPI0000052A01 | SEG:seg |
Description
At2g10940/F15K19.1 [Source:UniProtKB/TrEMBL;Acc:Q9SKI0]
Coordinates
chr2:-:4310412..4312103
Molecular Weight (calculated)
29650.1 Da
IEP (calculated)
9.966
GRAVY (calculated)
0.430
Length
291 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSSKLSSLS LCLFLICIIY LPQHSLACGS CNPRKGGKHS PKAPKLPVPP VTVPKLPVPP VTVPKLPVPP VTVPKLPVPP VTIPKLPVPP VTVPKLPVPP
101: VTVPKLPVPP VTVPKLPVPP VTVPKLPVPP VTVPKLPVPP VTVPKLPLPP ISGLPIPPVV GPNLPLPPLP IVGPILPPGT TPPATGGKDC PPPPGSVKPP
201: SGGGKATCPI DTLKLGACVD LLGGLVKIGL GDPAVNKCCP LLKGLVEVEA AACLCTTLKL KALDLNLYVP VALQLLLTCG KNPPPGYTCS I
101: VTVPKLPVPP VTVPKLPVPP VTVPKLPVPP VTVPKLPVPP VTVPKLPLPP ISGLPIPPVV GPNLPLPPLP IVGPILPPGT TPPATGGKDC PPPPGSVKPP
201: SGGGKATCPI DTLKLGACVD LLGGLVKIGL GDPAVNKCCP LLKGLVEVEA AACLCTTLKL KALDLNLYVP VALQLLLTCG KNPPPGYTCS I
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.