Factsheet for AT2G24740.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT1G17770.1	Thale cress	nucleus	60.66	66.09
CDY26218	Canola	nucleus	42.78	46.28
CDY56214	Canola	nucleus	47.28	45.02
CDY66122	Canola	nucleus	42.52	44.96
AT2G05900.1	Thale cress	cytoskeleton, cytosol, nucleus	18.54	44.87
AT1G73100.1	Thale cress	nucleus	38.81	43.8
AT5G04940.2	Thale cress	nucleus	35.76	40.3
Bra004258.1-P	Field mustard	nucleus	47.81	39.28
Bra025949.1-P	Field mustard	nucleus	43.31	36.62
CDY26221	Canola	nucleus	43.18	36.42
Zm00001d010646_P001	Maize	plastid	30.99	35.89
Os12t0128450-00	Rice	nucleus	28.87	35.5
GSMUA_Achr5P27620_001	Banana	nucleus	28.87	35.28
TraesCS4B01G280000.1	Wheat	nucleus	33.64	35.03
TraesCS1B01G378900.1	Wheat	nucleus	31.13	34.87
Os05t0490700-01	Rice	extracellular	30.99	34.82
TraesCS1D01G366800.1	Wheat	nucleus	31.13	34.76
TraesCS1A01G362000.1	Wheat	nucleus	30.86	34.47
EES19725	Sorghum	nucleus	30.73	34.42
Os11t0131600-00	Rice	nucleus	29.8	33.89
Zm00001d038541_P002	Maize	nucleus	30.99	33.81
TraesCS1B01G319000.1	Wheat	nucleus	29.67	33.23
TraesCS5A01G140500.1	Wheat	nucleus	29.8	32.99
TraesCS1A01G308300.1	Wheat	nucleus	29.4	32.94
TraesCS3A01G385200.1	Wheat	plastid	31.66	32.92
TraesCS1D01G307700.1	Wheat	nucleus	29.27	32.79
Os01t0811300-01	Rice	nucleus, plasma membrane	31.79	32.61
TraesCS5D01G152000.1	Wheat	nucleus	29.54	32.41
EES01635	Sorghum	nucleus	31.66	32.21
TraesCS4D01G278500.1	Wheat	nucleus	34.83	32.11
Os11t0602200-01	Rice	nucleus	34.44	31.98
TraesCS5B01G138800.1	Wheat	nucleus	29.93	31.83
EES10399	Sorghum	nucleus	34.17	31.5
TraesCS3D01G329100.1	Wheat	nucleus	30.99	31.49
TraesCS4A01G023500.1	Wheat	nucleus	34.7	31.41
TraesCS3A01G336100.1	Wheat	nucleus	30.99	31.41
TraesCS3B01G417400.1	Wheat	nucleus	34.44	31.21
TraesCS3B01G367200.1	Wheat	nucleus	30.6	31.09
TraesCS3B01G366900.1	Wheat	nucleus	30.6	31.09
EER96081	Sorghum	nucleus	34.17	31.08
Zm00001d043135_P003	Maize	nucleus	31.79	30.81
Zm00001d041005_P001	Maize	nucleus	28.48	30.76
Zm00001d019195_P001	Maize	nucleus	34.17	30.14
OQU78645	Sorghum	nucleus	29.14	29.49
TraesCS3D01G378200.1	Wheat	plastid	24.77	27.3
AT2G33290.2	Thale cress	nucleus	22.91	26.57
AT4G13460.2	Thale cress	nucleus	22.52	26.15
AT5G13960.1	Thale cress	nucleus	20.66	25.0
AT5G47150.1	Thale cress	cytosol	10.33	23.78
AT2G22740.1	Thale cress	nucleus	23.97	22.91
AT2G35160.3	Thale cress	nucleus	23.84	22.67
AT3G03750.2	Thale cress	nucleus	9.27	19.77
CDY01852	Canola	plasma membrane	48.08	19.56
AT5G47160.1	Thale cress	mitochondrion	9.67	17.59
AT3G04380.1	Thale cress	nucleus	10.86	16.67
AT5G43990.9	Thale cress	nucleus	12.45	12.7
AT1G04050.1	Thale cress	nucleus	11.92	12.26
AT2G23740.2	Thale cress	nucleus	12.58	6.87

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.7	Gene3D:2.170.270.10	Gene3D:2.30.280.10	EntrezGene:817010	ProteinID:AAD26896.1
ProteinID:AAK28973.1	ProteinID:AEC07623.1	ArrayExpress:AT2G24740	EnsemblPlantsGene:AT2G24740	RefSeq:AT2G24740	TAIR:AT2G24740
RefSeq:AT2G24740-TAIR-G	EnsemblPlants:AT2G24740.1	TAIR:AT2G24740.1	Unigene:At.66241	GO:GO:0000775	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005694	GO:GO:0006325	GO:GO:0006464
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008270	GO:GO:0008361
GO:GO:0009987	GO:GO:0016043	GO:GO:0016569	GO:GO:0016571	GO:GO:0016740	GO:GO:0018024
GO:GO:0019538	GO:GO:0032259	GO:GO:0034968	GO:GO:0040029	GO:GO:0042054	GO:GO:0046872
GO:GO:0048366	InterPro:Hist-Lys_N-MeTrfase_plant	InterPro:IPR001214	InterPro:IPR003105	InterPro:IPR003616	InterPro:IPR007728
InterPro:IPR025794	InterPro:IPR036987	RefSeq:NP_180049.2	PFAM:PF00856	PFAM:PF02182	PFAM:PF05033
PO:PO:0007131	PO:PO:0009005	PO:PO:0009046	PFscan:PS50280	PFscan:PS50868	PFscan:PS51015
PFscan:PS51575	PANTHER:PTHR22884	PANTHER:PTHR22884:SF415	InterPro:PUA-like_sf	InterPro:Post-SET_dom	InterPro:Pre-SET_dom
UniProt:Q9C5P0	Symbol:SDG21	InterPro:SET_dom	SMART:SM00317	SMART:SM00466	SMART:SM00468
InterPro:SRA-YDG_sf	InterPro:SRA_YDG	SUPFAM:SSF82199	SUPFAM:SSF88697	UniParc:UPI00000A7C23	SEG:seg

Description

SUVH8Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH8 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5P0]

Coordinates

chr2:-:10529690..10531957

Molecular Weight (calculated)

84532.4 Da

IEP (calculated)

6.131

GRAVY (calculated)

-0.649

Length

755 amino acids

Sequence
(BLAST)

001: MVSTPPTLLM LFDDGDAGPS TGLVHREKSD AVNEEAHATS VPPHAPPQTL WLLDNFNIED SYDRDAGPST GPVHRERSDA VNEEAHATSI PPHAPPQTLW
101: LLDNFNIEDS YDRDAGPSTS PIDREASHEV NEDAHATSAP PHVMVSPLQN RRPFDQFNNQ PYDASAGPST GPGKRGRGRP KGSKNGSRKP KKPKAYDNNS
201: TDASAGPSSG LGKRRCGRPK GLKNRSRKPK KPKADDPNSK MVISCPDFDS RITEAERESG NQEIVDSILM RFDAVRRRLC QLNYRKDKIL TASTNCMNLG
301: VRTNMTRRIG PIPGVQVGDI FYYWCEMCLV GLHRNTAGGI DSLLAKESGV DGPAATSVVT SGKYDNETED LETLIYSGHG GKPCDQVLQR GNRALEASVR
401: RRNEVRVIRG ELYNNEKVYI YDGLYLVSDC WQVTGKSGFK EYRFKLLRKP GQPPGYAIWK LVENLRNHEL IDPRQGFILG DLSFGEEGLR VPLVNEVDEE
501: DKTIPDDFDY IRSQCYSGMT NDVNVDSQSL VQSYIHQNCT CILKNCGQLP YHDNILVCRK PLIYECGGSC PTRMVETGLK LHLEVFKTSN CGWGLRSWDP
601: IRAGTFICEF TGVSKTKEEV EEDDDYLFDT SRIYHSFRWN YEPELLCEDA CEQVSEDANL PTQVLISAKE KGNVGRFMNH NCWPNVFWQP IEYDDNNGHI
701: YVRIGLFAMK HIPPMTELTY DYGISCVEKT GEDEVIYKGK KICLCGSVKC RGSFG

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.