Factsheet for AT2G35160.3

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra005362.1-P	Field mustard	nucleus	36.4	70.66
CDY31670	Canola	nucleus	56.17	62.2
CDX84255	Canola	nucleus	55.67	61.3
VIT_16s0013g00310.t01	Wine grape	nucleus	31.23	53.68
AT2G22740.1	Thale cress	nucleus	49.37	49.62
TraesCS3A01G520700.1	Wheat	nucleus	17.25	47.57
VIT_16s0013g00650.t01	Wine grape	nucleus	34.13	46.56
PGSC0003DMT400054167	Potato	nucleus	27.71	45.64
Solyc03g093720.1.1	Tomato	nucleus	15.74	41.67
Solyc03g093740.1.1	Tomato	nucleus	15.74	40.72
PGSC0003DMT400092528	Potato	cytosol	10.71	39.72
PGSC0003DMT400080404	Potato	nucleus, plastid	30.1	39.12
KRG90121	Soybean	nucleus	26.45	38.04
PGSC0003DMT400080391	Potato	nucleus	20.91	36.97
TraesCS3B01G590300.1	Wheat	nucleus	27.33	34.55
AT2G05900.1	Thale cress	cytoskeleton, cytosol, nucleus	13.22	33.65
Solyc03g093760.1.1	Tomato	nucleus	32.49	32.37
AT5G13960.1	Thale cress	nucleus	24.81	31.57
Solyc03g093710.1.1	Tomato	nucleus	33.25	31.5
PGSC0003DMT400054154	Potato	nucleus	33.12	31.01
Solyc03g093770.1.1	Tomato	golgi, plasma membrane	15.74	30.86
PGSC0003DMT400080398	Potato	nucleus	33.88	30.57
PGSC0003DMT400054163	Potato	extracellular, nucleus	32.24	30.48
Solyc03g093700.1.1	Tomato	nucleus	31.99	30.27
AT5G47150.1	Thale cress	cytosol	12.47	30.18
AT1G73100.1	Thale cress	nucleus	25.31	30.04
AT5G04940.2	Thale cress	nucleus	24.69	29.25
EES05802	Sorghum	nucleus	28.59	28.84
Os04t0544100-01	Rice	nucleus	29.85	28.18
AT4G13460.2	Thale cress	nucleus	22.54	27.54
EES12588	Sorghum	nucleus	30.73	27.39
AT2G33290.2	Thale cress	nucleus	22.42	27.34
AT5G47160.1	Thale cress	mitochondrion	13.85	26.51
TraesCS2D01G389100.1	Wheat	nucleus	30.6	25.31
TraesCS2B01G409600.1	Wheat	nucleus	30.6	25.26
AT1G17770.1	Thale cress	nucleus	21.91	25.11
TraesCS2A01G389600.1	Wheat	mitochondrion, nucleus	30.73	24.21
AT2G24740.1	Thale cress	nucleus	22.67	23.84
AT3G03750.2	Thale cress	nucleus	10.45	23.45
AT3G04380.1	Thale cress	nucleus	10.33	16.67
AT5G43990.9	Thale cress	nucleus	13.1	14.05
AT1G04050.1	Thale cress	nucleus	11.96	12.94
AT2G23740.2	Thale cress	nucleus	15.24	8.76

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.7	Gene3D:2.170.270.10	Gene3D:2.30.280.10	PDB:3Q0B	PDB:3Q0C
PDB:3Q0D	PDB:3Q0F	PDB:4YGI	EntrezGene:818083	UniProt:A0A178VMZ6	ProteinID:AAC61820.1
ProteinID:AEC09075.1	EMBL:AF344448	ProteinID:ANM62211.1	ProteinID:ANM62212.1	ProteinID:ANM62213.1	ProteinID:ANM62214.1
ArrayExpress:AT2G35160	EnsemblPlantsGene:AT2G35160	RefSeq:AT2G35160	TAIR:AT2G35160	RefSeq:AT2G35160-TAIR-G	EnsemblPlants:AT2G35160.3
EMBL:AY062735	Unigene:At.12724	EMBL:BT003374	GO:GO:0000775	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005694	GO:GO:0006139	GO:GO:0006325	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0008168	GO:GO:0008270	GO:GO:0009058	GO:GO:0009719	GO:GO:0009987	GO:GO:0010200
GO:GO:0016043	GO:GO:0016569	GO:GO:0016571	GO:GO:0016740	GO:GO:0018024	GO:GO:0019538
GO:GO:0031048	GO:GO:0032259	GO:GO:0034968	GO:GO:0040029	GO:GO:0042054	InterPro:Hist-Lys_N-MeTrfase_plant
InterPro:IPR001214	InterPro:IPR003105	InterPro:IPR003616	InterPro:IPR007728	InterPro:IPR025794	InterPro:IPR036987
RefSeq:NP_001324386.1	RefSeq:NP_001324387.1	RefSeq:NP_001324388.1	RefSeq:NP_001324389.1	RefSeq:NP_181061.1	UniProt:O82175
ProteinID:OAP07689.1	PFAM:PF00856	PFAM:PF02182	PFAM:PF05033	PFscan:PS50280	PFscan:PS50867
PFscan:PS50868	PFscan:PS51015	PFscan:PS51575	PANTHER:PTHR22884	PANTHER:PTHR22884:SF458	InterPro:PUA-like_sf
InterPro:Post-SET_dom	InterPro:Pre-SET_dom	InterPro:SET_dom	SMART:SM00317	SMART:SM00466	SMART:SM00468
SMART:SM00508	InterPro:SRA-YDG_sf	InterPro:SRA_YDG	SUPFAM:SSF82199	SUPFAM:SSF88697	Symbol:SUVH5
UniParc:UPI000000BFDF	SEG:seg	:	:	:	:

Description

SUVH5Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 [Source:UniProtKB/Swiss-Prot;Acc:O82175]

Coordinates

chr2:+:14822823..14826162

Molecular Weight (calculated)

88157.8 Da

IEP (calculated)

6.760

GRAVY (calculated)

-0.580

Length

794 amino acids

Sequence
(BLAST)

001: MVHSESSILS SLRGGDGGGI PCSKDELAIN GSYTDPMGRR KSKRFKVAAE SEFSPDFGSI TRQLRSRRMQ KEFTVETYET RNVSDVCVLS SQADVELIPG
101: EIVAERDSFK SVDCNDMSVG LTEGAESLGV NMQEPMKDRN MPENTSEQNM VEVHPPSISL PEEDMMGSVC RKSITGTKEL HGRTISVGRD LSPNMGSKFS
201: KNGKTAKRSI SVEEENLVLE KSDSGDHLGP SPEVLELEKS EVWIITDKGV VMPSPVKPSE KRNGDYGEGS MRKNSERVAL DKKRLASKFR LSNGGLPSCS
301: SSGDSARYKV KETMRLFHET CKKIMQEEEA RPRKRDGGNF KVVCEASKIL KSKGKNLYSG TQIIGTVPGV EVGDEFQYRM ELNLLGIHRP SQSGIDYMKD
401: DGGELVATSI VSSGGYNDVL DNSDVLIYTG QGGNVGKKKN NEPPKDQQLV TGNLALKNSI NKKNPVRVIR GIKNTTLQSS VVAKNYVYDG LYLVEEYWEE
501: TGSHGKLVFK FKLRRIPGQP ELPWKEVAKS KKSEFRDGLC NVDITEGKET LPICAVNNLD DEKPPPFIYT AKMIYPDWCR PIPPKSCGCT NGCSKSKNCA
601: CIVKNGGKIP YYDGAIVEIK PLVYECGPHC KCPPSCNMRV SQHGIKIKLE IFKTESRGWG VRSLESIPIG SFICEYAGEL LEDKQAESLT GKDEYLFDLG
701: DEDDPFTINA AQKGNIGRFI NHSCSPNLYA QDVLYDHEEI RIPHIMFFAL DNIPPLQELS YDYNYKIDQV YDSNGNIKKK FCYCGSAECS GRLY

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.