Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX92067 | Canola | nucleus | 75.41 | 78.6 |
| CDY49341 | Canola | nucleus | 75.0 | 66.25 |
| Bra001104.1-P | Field mustard | nucleus | 73.98 | 48.15 |
| CDY42922 | Canola | plasma membrane, vacuole | 78.66 | 46.74 |
| Zm00001d051126_P004 | Maize | nucleus | 43.9 | 42.6 |
| TraesCSU01G137800.1 | Wheat | nucleus | 34.96 | 41.25 |
| Bra040197.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 76.63 | 40.02 |
| PGSC0003DMT400051920 | Potato | nucleus | 40.65 | 39.29 |
| KRH34133 | Soybean | nucleus | 53.05 | 38.05 |
| KRH68776 | Soybean | nucleus | 52.24 | 37.96 |
| KRG92731 | Soybean | nucleus | 53.46 | 36.89 |
| KRG97025 | Soybean | nucleus | 20.93 | 36.27 |
| TraesCS2D01G478100.1 | Wheat | nucleus | 42.89 | 35.28 |
| TraesCS2A01G478800.1 | Wheat | nucleus | 42.68 | 35.0 |
| TraesCS2B01G503200.1 | Wheat | nucleus | 42.68 | 34.94 |
| OQU85329 | Sorghum | nucleus | 46.54 | 33.78 |
| HORVU7Hr1G064110.6 | Barley | nucleus, plastid | 41.46 | 33.55 |
| GSMUA_Achr1P20340_001 | Banana | nucleus | 48.37 | 33.52 |
| TraesCS6A01G226600.1 | Wheat | nucleus | 45.53 | 32.89 |
| TraesCS6B01G255000.1 | Wheat | nucleus | 45.33 | 32.75 |
| TraesCS6D01G208400.1 | Wheat | nucleus | 45.12 | 32.6 |
| Os02t0621100-01 | Rice | nucleus | 46.75 | 31.04 |
| TraesCS2D01G378500.3 | Wheat | nucleus | 42.48 | 30.83 |
| TraesCS2A01G382000.5 | Wheat | nucleus | 42.28 | 30.72 |
| TraesCS2B01G399300.4 | Wheat | nucleus | 41.87 | 30.43 |
| TraesCS2B01G501300.2 | Wheat | mitochondrion, nucleus | 44.51 | 29.59 |
| TraesCS2D01G477200.1 | Wheat | mitochondrion, nucleus | 44.31 | 29.54 |
| EES15150 | Sorghum | nucleus | 43.7 | 29.09 |
| HORVU2Hr1G127700.1 | Barley | nucleus | 41.67 | 29.0 |
| TraesCS2A01G478000.1 | Wheat | mitochondrion, nucleus | 43.7 | 28.86 |
| HORVU2Hr1G107560.8 | Barley | mitochondrion, nucleus | 42.48 | 28.75 |
| Zm00001d049884_P006 | Maize | nucleus | 42.89 | 28.4 |
| TraesCS2B01G616200.1 | Wheat | nucleus | 42.07 | 28.09 |
| TraesCS2D01G566400.1 | Wheat | nucleus | 41.67 | 27.82 |
| Zm00001d031851_P002 | Maize | nucleus | 42.07 | 27.79 |
| VIT_07s0005g04190.t01 | Wine grape | mitochondrion, nucleus | 46.54 | 27.0 |
| HORVU6Hr1G057990.5 | Barley | nucleus | 44.11 | 26.89 |
| HORVU2Hr1G127770.1 | Barley | nucleus | 38.21 | 26.59 |
| AT1G04050.1 | Thale cress | nucleus | 39.23 | 26.29 |
| EES13161 | Sorghum | nucleus | 41.87 | 26.14 |
| AT5G43990.9 | Thale cress | nucleus | 39.02 | 25.95 |
| Solyc06g083760.2.1 | Tomato | nucleus | 45.33 | 25.9 |
| Solyc09g072890.1.1 | Tomato | nucleus | 42.28 | 25.21 |
| Zm00001d002938_P001 | Maize | nucleus | 32.72 | 22.64 |
| AT3G03750.2 | Thale cress | nucleus | 15.45 | 21.47 |
| AT1G73100.1 | Thale cress | nucleus | 20.33 | 14.95 |
| AT2G05900.1 | Thale cress | cytoskeleton, cytosol, nucleus | 8.94 | 14.1 |
| AT5G13960.1 | Thale cress | nucleus | 17.68 | 13.94 |
| AT5G04940.2 | Thale cress | nucleus | 18.7 | 13.73 |
| AT1G17770.1 | Thale cress | nucleus | 17.68 | 12.55 |
| AT4G13460.2 | Thale cress | nucleus | 16.46 | 12.46 |
| AT2G22740.1 | Thale cress | nucleus | 18.7 | 11.65 |
| AT2G33290.2 | Thale cress | nucleus | 14.43 | 10.91 |
| AT2G24740.1 | Thale cress | nucleus | 16.67 | 10.86 |
| AT2G35160.3 | Thale cress | nucleus | 16.67 | 10.33 |
| AT2G23740.2 | Thale cress | nucleus | 21.54 | 7.67 |
| CDY42923 | Canola | mitochondrion | 0.61 | 2.14 |
| CDX92068 | Canola | mitochondrion | 0.61 | 2.14 |
| AT5G47150.1 | Thale cress | cytosol | 1.22 | 1.83 |
| AT5G47160.1 | Thale cress | mitochondrion | 1.42 | 1.69 |
Protein Annotations
| KEGG:00310+2.1.1.43 | Gene3D:1.10.8.850 | MapMan:12.3.3.7 | PDB:2LXE | EntrezGene:819593 | ProteinID:AAF63769.1 |
| ProteinID:AEE74073.1 | EMBL:AF408062 | ProteinID:ANM65869.1 | ArrayExpress:AT3G04380 | EnsemblPlantsGene:AT3G04380 | RefSeq:AT3G04380 |
| TAIR:AT3G04380 | RefSeq:AT3G04380-TAIR-G | EnsemblPlants:AT3G04380.1 | TAIR:AT3G04380.1 | Unigene:At.27206 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005694 | GO:GO:0005730 | GO:GO:0006325 | GO:GO:0006464 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008168 | GO:GO:0008270 | GO:GO:0009506 | GO:GO:0009987 | GO:GO:0016043 |
| GO:GO:0016569 | GO:GO:0016740 | GO:GO:0018024 | GO:GO:0019538 | GO:GO:0032259 | GO:GO:0034968 |
| GO:GO:0046872 | InterPro:IPR001214 | InterPro:IPR007728 | InterPro:IPR025776 | RefSeq:NP_001327806.1 | RefSeq:NP_187088.2 |
| PFAM:PF00856 | PFAM:PF05033 | PFAM:PF10440 | PO:PO:0000293 | PFscan:PS50280 | PFscan:PS50867 |
| PFscan:PS51580 | PANTHER:PTHR22884 | PANTHER:PTHR22884:SF460 | InterPro:Pre-SET_dom | UniProt:Q8W595 | InterPro:SET_dom |
| SMART:SM00317 | SMART:SM00468 | SUPFAM:SSF82199 | Symbol:SUVR4 | InterPro:SUVR4/1/2 | UniParc:UPI000016334C |
| InterPro:WIYLD_domain | : | : | : | : | : |
Description
SUVR4Histone-lysine N-methyltransferase SUVR4 [Source:UniProtKB/Swiss-Prot;Acc:Q8W595]
Coordinates
chr3:+:1161366..1164977
Molecular Weight (calculated)
55857.5 Da
IEP (calculated)
7.837
GRAVY (calculated)
-0.655
Length
492 amino acids
Sequence
(BLAST)
(BLAST)
001: MISLSGLTSS VESDLDMQQA MLTNKDEKVL KALERTRQLD IPDEKTMPVL MKLLEEAGGN WSYIKLDNYT ALVDAIYSVE DENKQSEGSS NGNRGKNLKV
101: IDSPATLKKT YETRSASSGS SIQVVQKQPQ LSNGDRKRKY KSRIADITKG SESVKIPLVD DVGSEAVPKF TYIPHNIVYQ SAYLHVSLAR ISDEDCCANC
201: KGNCLSADFP CTCARETSGE YAYTKEGLLK EKFLDTCLKM KKEPDSFPKV YCKDCPLERD HDKGTYGKCD GHLIRKFIKE CWRKCGCDMQ CGNRVVQRGI
301: RCQLQVYFTQ EGKGWGLRTL QDLPKGTFIC EYIGEILTNT ELYDRNVRSS SERHTYPVTL DADWGSEKDL KDEEALCLDA TICGNVARFI NHRCEDANMI
401: DIPIEIETPD RHYYHIAFFT LRDVKAMDEL TWDYMIDFND KSHPVKAFRC CCGSESCRDR KIKGSQGKSI ERRKIVSAKK QQGSKEVSKK RK
101: IDSPATLKKT YETRSASSGS SIQVVQKQPQ LSNGDRKRKY KSRIADITKG SESVKIPLVD DVGSEAVPKF TYIPHNIVYQ SAYLHVSLAR ISDEDCCANC
201: KGNCLSADFP CTCARETSGE YAYTKEGLLK EKFLDTCLKM KKEPDSFPKV YCKDCPLERD HDKGTYGKCD GHLIRKFIKE CWRKCGCDMQ CGNRVVQRGI
301: RCQLQVYFTQ EGKGWGLRTL QDLPKGTFIC EYIGEILTNT ELYDRNVRSS SERHTYPVTL DADWGSEKDL KDEEALCLDA TICGNVARFI NHRCEDANMI
401: DIPIEIETPD RHYYHIAFFT LRDVKAMDEL TWDYMIDFND KSHPVKAFRC CCGSESCRDR KIKGSQGKSI ERRKIVSAKK QQGSKEVSKK RK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.