Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 3
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 4
- golgi 3
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G02502.1 | Thale cress | endoplasmic reticulum, plasma membrane | 91.43 | 91.43 |
| OQU90276 | Sorghum | endoplasmic reticulum, plasma membrane | 94.29 | 89.19 |
| KRG95809 | Soybean | endoplasmic reticulum, plasma membrane | 91.43 | 86.49 |
| KRH67533 | Soybean | endoplasmic reticulum, plasma membrane | 91.43 | 86.49 |
| HORVU6Hr1G068000.1 | Barley | endoplasmic reticulum, plasma membrane | 88.57 | 86.11 |
| HORVU7Hr1G093100.1 | Barley | endoplasmic reticulum, vacuole | 88.57 | 86.11 |
| HORVU0Hr1G018520.1 | Barley | endoplasmic reticulum, plasma membrane | 85.71 | 83.33 |
| HORVU2Hr1G053080.1 | Barley | endoplasmic reticulum, plasma membrane | 85.71 | 83.33 |
| TraesCS2B01G190800.1 | Wheat | endoplasmic reticulum, extracellular | 85.71 | 83.33 |
| Os03t0392050-01 | Rice | endoplasmic reticulum, plasma membrane | 88.57 | 81.58 |
| AT3G12587.1 | Thale cress | endoplasmic reticulum, plasma membrane | 82.86 | 78.38 |
| HORVU7Hr1G040490.1 | Barley | endoplasmic reticulum, vacuole | 74.29 | 72.22 |
| Os07t0620500-01 | Rice | endoplasmic reticulum, plasma membrane | 94.29 | 63.46 |
| VIT_08s0007g00090.t01 | Wine grape | plasma membrane | 91.43 | 49.23 |
| Zm00001d022174_P001 | Maize | cytosol | 94.29 | 45.83 |
Protein Annotations
| MapMan:18.1.1.5.4 | EntrezGene:28719217 | ProteinID:AAF23278.1 | ProteinID:ANM65720.1 | ProteinID:ANM65721.1 | ArrayExpress:AT3G09455 |
| EnsemblPlantsGene:AT3G09455 | EnsemblPlants:AT3G09455.1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005783 | GO:GO:0005789 | GO:GO:0016020 | GO:GO:0016021 | RefSeq:NP_001327668.1 | RefSeq:NP_001327669.1 |
| InterPro:Oligosaccaryltransferase | InterPro:Ost4p_sf | PFAM:PF10215 | PANTHER:PTHR28677 | UniProt:Q9SF57 | SUPFAM:SSF103464 |
| TMHMM:TMhelix | UniParc:UPI00000AA00E | : | : | : | : |
Description
OST4CDolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4C [Source:UniProtKB/Swiss-Prot;Acc:Q9SF57]
Coordinates
chr3:-:2910411..2911354
Molecular Weight (calculated)
4133.1 Da
IEP (calculated)
3.884
GRAVY (calculated)
0.974
Length
35 amino acids
Sequence
(BLAST)
(BLAST)
1: MFDDQDLGFF ANFLGIFIFI LVIAYHFVMA DPKFE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.