Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plasma membrane 2
- extracellular 2
- endoplasmic reticulum 3
- golgi 2
- vacuole 4
- plastid 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001852.1-P | Field mustard | extracellular | 49.0 | 65.9 |
| Bra031329.1-P | Field mustard | extracellular | 55.84 | 57.65 |
| AT4G15160.1 | Thale cress | extracellular | 43.3 | 55.27 |
| TraesCS7D01G020100.1 | Wheat | cytosol, plastid | 17.38 | 54.95 |
| GSMUA_Achr2P01500_001 | Banana | endoplasmic reticulum, extracellular | 23.93 | 54.19 |
| VIT_03s0017g02260.t01 | Wine grape | extracellular | 29.34 | 52.82 |
| VIT_03s0017g02200.t01 | Wine grape | extracellular | 29.63 | 49.76 |
| TraesCS7D01G020000.1 | Wheat | plastid | 19.94 | 49.3 |
| TraesCS2B01G444500.1 | Wheat | extracellular | 22.79 | 48.78 |
| TraesCS2D01G422700.1 | Wheat | extracellular | 22.79 | 48.78 |
| TraesCS2D01G422800.1 | Wheat | extracellular, plastid | 27.07 | 48.72 |
| TraesCS7A01G024100.1 | Wheat | plastid | 20.51 | 48.32 |
| Zm00001d002347_P001 | Maize | extracellular | 19.66 | 47.59 |
| TraesCS2A01G424800.1 | Wheat | extracellular | 21.94 | 46.95 |
| OQU82307 | Sorghum | extracellular, plasma membrane | 18.8 | 44.59 |
| KRG90032 | Soybean | extracellular | 41.6 | 44.51 |
| Zm00001d026282_P001 | Maize | extracellular | 20.23 | 44.1 |
| Os04t0612500-01 | Rice | endoplasmic reticulum, plasma membrane, vacuole | 10.54 | 41.57 |
| Os06t0168700-01 | Rice | plastid | 29.06 | 41.46 |
| TraesCS7A01G024200.1 | Wheat | plastid | 25.36 | 40.09 |
| KRH17654 | Soybean | extracellular | 42.45 | 38.8 |
| AT1G62500.1 | Thale cress | extracellular | 32.19 | 38.05 |
| PGSC0003DMT400035207 | Potato | extracellular | 41.88 | 37.69 |
| EER89284 | Sorghum | endoplasmic reticulum, vacuole | 34.47 | 37.35 |
| HORVU2Hr1G099450.1 | Barley | endoplasmic reticulum | 19.94 | 36.46 |
| AT2G10940.2 | Thale cress | endoplasmic reticulum, plasma membrane | 29.91 | 36.08 |
| HORVU7Hr1G027440.2 | Barley | extracellular | 28.49 | 35.34 |
| HORVU2Hr1G099370.2 | Barley | mitochondrion | 27.07 | 35.19 |
| TraesCS7B01G031800.1 | Wheat | extracellular | 28.77 | 31.46 |
| HORVU2Hr1G099470.5 | Barley | extracellular | 29.34 | 21.73 |
| AT3G22142.1 | Thale cress | extracellular, plasma membrane, vacuole | 39.6 | 9.39 |
Protein Annotations
| Gene3D:1.10.110.10 | MapMan:35.1 | EntrezGene:821775 | UniProt:A0A1I9LSA3 | ProteinID:AEE76592.1 | ProteinID:ANM65461.1 |
| ArrayExpress:AT3G22120 | EnsemblPlantsGene:AT3G22120 | RefSeq:AT3G22120 | TAIR:AT3G22120 | RefSeq:AT3G22120-TAIR-G | EnsemblPlants:AT3G22120.2 |
| Unigene:At.48692 | ProteinID:BAB03061.1 | EMBL:BT030017 | InterPro:Bifun_inhib/LTP/seed_sf | Symbol:CWLP | InterPro:Hydrophob_seed |
| RefSeq:NP_001327425.1 | RefSeq:NP_188851.2 | PFAM:PF14547 | PRINTS:PR01217 | PANTHER:PTHR31731 | PANTHER:PTHR31731:SF52 |
| SUPFAM:SSF47699 | SignalP:SignalP-noTM | UniParc:UPI00001634CD | SEG:seg | : | : |
Description
CWLPCell wall-plasma membrane linker protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSA3]
Coordinates
chr3:-:7794758..7796460
Molecular Weight (calculated)
36733.9 Da
IEP (calculated)
10.565
GRAVY (calculated)
-0.435
Length
351 amino acids
Sequence
(BLAST)
(BLAST)
001: MYLLTHSFQK PKPSFQKMGS RSQNLSFLVL LLLGFVAVSY ACDCTPPKPS PAPHKPPKHP VKPPKPPAVK PPKPPAVKPP TPKPPTVKPH PKPPTVKPHP
101: KPPTVKPHPK PPTVKPPHPK PPTKPHPHPK PPIVKPPTKP PPSTPKPPTK PPPSTPKPPT TKPPPSTPKP PHHKPPPTPC PPPTPTPTPP VVTPPTPTPP
201: VITPPTPTPP VVTPPTPTPP VITPPTPTPP VITPPTPTPP VVTPPTPTPP VVTPPTPTPP TPIPETCPID TLKLGACVDV LGGLIHIGLG KSHAKAECCP
301: VLGGLLDLDA AVCLCTTIKL KLLNIDLVLP IALELLLDCG KTPPSDFKCP A
101: KPPTVKPHPK PPTVKPPHPK PPTKPHPHPK PPIVKPPTKP PPSTPKPPTK PPPSTPKPPT TKPPPSTPKP PHHKPPPTPC PPPTPTPTPP VVTPPTPTPP
201: VITPPTPTPP VVTPPTPTPP VITPPTPTPP VITPPTPTPP VVTPPTPTPP VVTPPTPTPP TPIPETCPID TLKLGACVDV LGGLIHIGLG KSHAKAECCP
301: VLGGLLDLDA AVCLCTTIKL KLLNIDLVLP IALELLLDCG KTPPSDFKCP A
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.