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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, vacuole, extracellular

Predictor Summary:
  • golgi 4
  • endoplasmic reticulum 4
  • extracellular 5
  • plasma membrane 4
  • vacuole 4
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7D01G020100.1 Wheat cytosol, plastid 4.12 54.95
Bra001852.1-P Field mustard extracellular 8.72 49.43
VIT_03s0017g02200.t01 Wine grape extracellular 6.89 48.8
VIT_03s0017g02260.t01 Wine grape extracellular 6.42 48.72
GSMUA_Achr2P01500_001 Banana endoplasmic reticulum, extracellular 4.93 47.1
TraesCS7D01G020000.1 Wheat plastid 4.39 45.77
TraesCS7A01G024100.1 Wheat plastid 4.59 45.64
TraesCS2B01G444500.1 Wheat extracellular 4.86 43.9
TraesCS2D01G422700.1 Wheat extracellular 4.86 43.9
AT4G15160.1 Thale cress extracellular 8.11 43.64
Zm00001d002347_P001 Maize extracellular 4.26 43.45
OQU82307 Sorghum extracellular, plasma membrane 4.32 43.24
TraesCS2D01G422800.1 Wheat extracellular, plastid 5.61 42.56
TraesCS2A01G424800.1 Wheat extracellular 4.66 42.07
Bra031329.1-P Field mustard extracellular 9.46 41.18
Zm00001d026282_P001 Maize extracellular 4.32 39.75
TraesCS7A01G024200.1 Wheat plastid 5.95 39.64
AT3G22120.2 Thale cress plastid 9.39 39.6
Os04t0612500-01 Rice endoplasmic reticulum, plasma membrane, vacuole 2.3 38.2
Os06t0168700-01 Rice plastid 6.22 37.4
KRG90032 Soybean extracellular 7.84 35.37
HORVU2Hr1G099450.1 Barley endoplasmic reticulum 4.46 34.38
PGSC0003DMT400035207 Potato extracellular 8.65 32.82
AT2G10940.2 Thale cress endoplasmic reticulum, plasma membrane 6.22 31.62
HORVU7Hr1G027440.2 Barley extracellular 6.01 31.45
KRH17654 Soybean extracellular 7.97 30.73
AT1G62500.1 Thale cress extracellular 6.08 30.3
HORVU2Hr1G099370.2 Barley mitochondrion 5.41 29.63
EER89284 Sorghum endoplasmic reticulum, vacuole 6.49 29.63
TraesCS7B01G031800.1 Wheat extracellular 6.22 28.66
HORVU2Hr1G099470.5 Barley extracellular 6.96 21.73
Protein Annotations
Gene3D:1.10.110.10MapMan:35.1EntrezGene:5008021ProteinID:AEE76593.1ArrayExpress:AT3G22142EnsemblPlantsGene:AT3G22142
RefSeq:AT3G22142TAIR:AT3G22142RefSeq:AT3G22142-TAIR-GEnsemblPlants:AT3G22142.1TAIR:AT3G22142.1Unigene:At.71418
ProteinID:BAB03062.1InterPro:Bifun_inhib/LTP/seed_sfGO:GO:0005575InterPro:Hydrophob_seedRefSeq:NP_001078199.1PFAM:PF14547
PO:PO:0000293PRINTS:PR01217PANTHER:PTHR35077PANTHER:PTHR35077:SF1UniProt:Q9LIE8SUPFAM:SSF47699
SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI00000A5993SEG:seg::
Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LIE8]
Coordinates
chr3:-:7803492..7808046
Molecular Weight (calculated)
147162.0 Da
IEP (calculated)
11.393
GRAVY (calculated)
-0.131
Length
1480 amino acids
Sequence
(BLAST)
0001: MGFRTRNLSF LILLLLNFFA ATYARECSPP KPSPKPHKPP KHSVVPPKPP AVKPHPHPKP PTIKPPPPKR HPHPKPPTVK PHPHPKPPTK PHPHPKPPTK
0101: PHPHPKPPTI KPPPHPKPRP HPKPPNVKPH PHPKPPTKPH PHPKPPTKHH PHPKPPTIKP PPKPPSVKPP PSTPKPPTTN PPPSTPQPPT HKPPPCTPTP
0201: PVASPPMATP PTQMPPIATP PIAKSPVATP PIATPPTATP PITIPPVATP PITTPPIANP PIIMPPIATP PVAAPPITNP PISKPPVTTP PTTTPPIAKP
0301: PIATPPISTP PAATPPAATP PITTLPPAKP PVAISPIVTP PVTPIAQPPV ATPPTATPPV ATPPIATPPT SKSPISTPPI SESPVATPPT ATSPIKTPPP
0401: AKPPVATPPI AKSPIATPPT ATPPVATPPI EKPPVATPPT TTPPTATPPV AKPPVETPPI ATPPTAKPPI STPPISKPPV ATPPAATPPI TTPTPVKPPV
0501: ATPPLAIPPV AKPPVVTPPT ATPPIATPPI AKSPVATPPT ATPPVATPPI AKPPVVTPPT TTPPTATPPV AKPPVATPPI ATPPTAKPPI STPPISKSPV
0601: ATPPAATPPI TTPPPAKPPV ATPPIATPPI AKPPVATPPT ATPPIATSPV AKPPVATPPI KTPPPAKPPV AIPPIATPPV AKPPVATPPT ATPPIATPPI
0701: ATPPVVTPPT ATPPVATPPI AKPPTTIPPT ATPPVAMPPI ATPPTAKPPI ATPPIAIPPV AKPPVVTPPT ATPPIATPPI AKSPVATPPT ATPPVATPPI
0801: AKPPVATPPT TAPPTATPPV AKPPVATPPI ATPPTAKPPI LTPPISKPPV ATPPAATPPI TTPPPAKPPV ATPPIATPPI AKPPVATPPT ATPPIATSPV
0901: AKPPVAIPPI KTPPPAKPPV AIPPIATPPV AKPPVATPPT ATPPIATSPI ATPPVVTPPT ATSPVATPPI AKPPTTTPPT ATPPVAMPPI ATPPTAKPPV
1001: ATPPIANPPV EKPPVATPPI AKPPTVLPPI AKPPVETSPT ATPPTATPPV AIPPVVKPPV AIPPITKPPV ATPPVTNPPT AMPPIVTPPP IVTPPIAKSP
1101: IATPPVSTPP IAKPPIATPP VATTPIAKPP IATPPTANPP VANPPIAKSP IAKPPIATPP TAMPSIATPP IGKPPVATPP MAKPPVASPP IATPPIIKPP
1201: VATPPITKPP VATPPVATPP IAKPPVATSP IETPPVAKPP VTTPPVATPP IVKPPIVTPP IATPPIAKSP IAPPPIGTPP IAKPPVATPP TATPPVATSP
1301: IAKPPVATPP PATPPVAKPP VATPPTVTPP VATPPIAKPP GARPPVATPP VATPPIAKSP VATPPMTKPP VASSPIATPP IAKTPIATPP TTMPKTCPID
1401: TLKLGSCVDL LGGLVHIGIG KSAKEKCCPV VEGLVDLDAA VCLCTTIKAK LLNIDVILPI ALEVLLNCGK NPPPGFKCPA
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.