Factsheet for AT4G13460.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX73506	Canola	nucleus	75.08	77.09
CDX78210	Canola	nucleus	74.46	76.7
Bra007048.1-P	Field mustard	nucleus	74.31	76.55
PGSC0003DMT400075191	Potato	nucleus	58.0	57.12
VIT_05s0049g02220.t01	Wine grape	nucleus	58.92	56.99
AT2G33290.2	Thale cress	nucleus	56.62	56.53
Solyc12g096990.1.1	Tomato	nucleus	56.92	55.64
Solyc09g090810.1.1	Tomato	nucleus	58.0	54.17
PGSC0003DMT400003956	Potato	nucleus	57.38	53.59
KRH49479	Soybean	nucleus	56.31	51.62
KRG89164	Soybean	nucleus	55.85	50.7
KRH07636	Soybean	nucleus	43.54	49.22
GSMUA_Achr4P29270_001	Banana	nucleus	40.31	48.7
GSMUA_Achr5P13120_001	Banana	nucleus	45.23	48.43
TraesCS2A01G235400.1	Wheat	nucleus	47.69	46.27
TraesCS2D01G240000.1	Wheat	nucleus	47.85	46.07
Os07t0435900-01	Rice	nucleus	48.31	45.91
HORVU2Hr1G053260.1	Barley	nucleus	47.54	45.85
GSMUA_Achr1P01130_001	Banana	nucleus	38.77	45.82
TraesCS2B01G254700.1	Wheat	nucleus	47.23	45.62
EER96294	Sorghum	nucleus	48.62	44.51
Zm00001d005445_P001	Maize	nucleus	36.46	41.51
GSMUA_Achr6P36730_001	Banana	nucleus	37.38	41.19
Zm00001d019520_P001	Maize	nucleus	36.62	36.23
AT2G05900.1	Thale cress	cytoskeleton, cytosol, nucleus	14.92	31.09
AT5G04940.2	Thale cress	nucleus	31.08	30.15
AT1G73100.1	Thale cress	nucleus	28.62	27.8
AT5G13960.1	Thale cress	nucleus	25.54	26.6
AT1G17770.1	Thale cress	nucleus	25.54	23.95
AT2G22740.1	Thale cress	nucleus	28.77	23.67
AT2G35160.3	Thale cress	nucleus	27.54	22.54
AT2G24740.1	Thale cress	nucleus	26.15	22.52
AT5G47150.1	Thale cress	cytosol	11.08	21.95
AT3G03750.2	Thale cress	nucleus	11.69	21.47
AT5G47160.1	Thale cress	mitochondrion	11.54	18.07
AT3G04380.1	Thale cress	nucleus	12.46	16.46
AT5G43990.9	Thale cress	nucleus	15.38	13.51
AT1G04050.1	Thale cress	nucleus	15.23	13.49
AT2G23740.2	Thale cress	nucleus	14.62	6.87

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.7	MapMan:12.5.1.1	Gene3D:2.170.270.10	Gene3D:2.30.280.10	PDB:4NJ5
EntrezGene:826978	ProteinID:AEE83282.1	ProteinID:AEE83283.1	EMBL:AF344452	EMBL:AK317297	ArrayExpress:AT4G13460
EnsemblPlantsGene:AT4G13460	RefSeq:AT4G13460	TAIR:AT4G13460	RefSeq:AT4G13460-TAIR-G	EnsemblPlants:AT4G13460.2	TAIR:AT4G13460.2
Unigene:At.3118	UniProt:B9DGV6	ProteinID:CAB41104.1	ProteinID:CAB78388.1	GO:GO:0000775	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005694	GO:GO:0006139	GO:GO:0006259
GO:GO:0006325	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009294
GO:GO:0009987	GO:GO:0016043	GO:GO:0016569	GO:GO:0016571	GO:GO:0016740	GO:GO:0018024
GO:GO:0019538	GO:GO:0034968	GO:GO:0046872	GO:GO:0080188	InterPro:Hist-Lys_N-MeTrfase_plant	InterPro:IPR001214
InterPro:IPR003105	InterPro:IPR007728	InterPro:IPR025794	InterPro:IPR036987	RefSeq:NP_001031625.1	RefSeq:NP_193082.1
PFAM:PF00856	PFAM:PF02182	PFAM:PF05033	PO:PO:0000013	PO:PO:0000037	PO:PO:0000084
PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185
PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115
PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006
PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031
PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038
PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025195	PO:PO:0025281	PFscan:PS50280
PFscan:PS50867	PFscan:PS51015	PFscan:PS51575	PANTHER:PTHR22884	PANTHER:PTHR22884:SF95	InterPro:PUA-like_sf
InterPro:Pre-SET_dom	UniProt:Q9T0G7	Symbol:SDG22	InterPro:SET_dom	SMART:SM00317	SMART:SM00466
SMART:SM00468	InterPro:SRA-YDG_sf	InterPro:SRA_YDG	SUPFAM:SSF82199	SUPFAM:SSF88697	UniParc:UPI00000A733C
SEG:seg	:	:	:	:	:

Description

SUVH9Histone-lysine N-methyltransferase family member SUVH9 [Source:UniProtKB/Swiss-Prot;Acc:Q9T0G7]

Coordinates

chr4:-:7823961..7827004

Molecular Weight (calculated)

72178.2 Da

IEP (calculated)

4.908

GRAVY (calculated)

-0.355

Length

650 amino acids

Sequence
(BLAST)

001: MGSSHIPLDP SLNPSPSLIP KLEPVTESTQ NLAFQLPNTN PQALISSAVS DFNEATDFSS DYNTVAESAR SAFAQRLQRH DDVAVLDSLT GAIVPVEENP
101: EPEPNPYSTS DSSPSVATQR PRPQPRSSEL VRITDVGPES ERQFREHVRK TRMIYDSLRM FLMMEEAKRN GVGGRRARAD GKAGKAGSMM RDCMLWMNRD
201: KRIVGSIPGV QVGDIFFFRF ELCVMGLHGH PQSGIDFLTG SLSSNGEPIA TSVIVSGGYE DDDDQGDVIM YTGQGGQDRL GRQAEHQRLE GGNLAMERSM
301: YYGIEVRVIR GLKYENEVSS RVYVYDGLFR IVDSWFDVGK SGFGVFKYRL ERIEGQAEMG SSVLKFARTL KTNPLSVRPR GYINFDISNG KENVPVYLFN
401: DIDSDQEPLY YEYLAQTSFP PGLFVQQSGN ASGCDCVNGC GSGCLCEAKN SGEIAYDYNG TLIRQKPLIH ECGSACQCPP SCRNRVTQKG LRNRLEVFRS
501: LETGWGVRSL DVLHAGAFIC EYAGVALTRE QANILTMNGD TLVYPARFSS ARWEDWGDLS QVLADFERPS YPDIPPVDFA MDVSKMRNVA CYISHSTDPN
601: VIVQFVLHDH NSLMFPRVML FAAENIPPMT ELSLDYGVVD DWNAKLAICN

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.