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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • endoplasmic reticulum 7
  • golgi 6
  • extracellular 5
  • vacuole 4
  • plasma membrane 4
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:secretory
BaCelLo:endoplasmic reticulum, extracellular, golgi
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:endoplasmic reticulum
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY12709 Canola endoplasmic reticulum 88.65 88.82
CDY01156 Canola endoplasmic reticulum 88.45 88.62
Bra032734.1-P Field mustard endoplasmic reticulum 88.45 88.62
AT4G31500.1 Thale cress endoplasmic reticulum, extracellular 61.35 61.72
KRH05914 Soybean extracellular, golgi, plastid 38.84 37.57
AT5G25120.1 Thale cress endoplasmic reticulum, plastid 36.85 37.3
AT5G25180.1 Thale cress endoplasmic reticulum 36.45 36.9
AT5G25130.1 Thale cress endoplasmic reticulum 36.45 36.9
GSMUA_Achr3P10540_001 Banana endoplasmic reticulum, extracellular, mitochondrion 21.71 36.82
AT5G25140.1 Thale cress endoplasmic reticulum, extracellular, plasma membrane 36.06 36.49
GSMUA_Achr3P10550_001 Banana extracellular, golgi 31.27 36.18
AT3G26830.1 Thale cress endoplasmic reticulum 35.26 36.12
AT3G26230.1 Thale cress endoplasmic reticulum 35.46 35.74
AT1G13090.2 Thale cress endoplasmic reticulum 34.86 35.71
AT1G13080.1 Thale cress endoplasmic reticulum 35.66 35.66
AT1G13100.1 Thale cress endoplasmic reticulum, golgi, plasma membrane 34.46 35.31
AT3G26300.1 Thale cress endoplasmic reticulum, extracellular 35.06 35.2
AT3G26330.1 Thale cress extracellular, golgi, vacuole 35.06 35.2
GSMUA_AchrUn_... Banana endoplasmic reticulum 26.69 34.9
AT2G24180.1 Thale cress endoplasmic reticulum 34.86 34.79
AT3G26220.1 Thale cress endoplasmic reticulum 34.66 34.73
AT3G26210.1 Thale cress endoplasmic reticulum 34.46 34.53
AT3G26310.1 Thale cress endoplasmic reticulum, golgi 33.86 34.0
AT2G02580.1 Thale cress extracellular, golgi, vacuole 33.86 34.0
AT3G26290.2 Thale cress endoplasmic reticulum, golgi 34.66 33.92
AT3G26190.1 Thale cress endoplasmic reticulum, golgi, plasma membrane 33.67 33.87
AT3G26170.1 Thale cress endoplasmic reticulum 33.86 33.86
AT3G26180.1 Thale cress endoplasmic reticulum 33.86 33.86
AT1G13110.1 Thale cress endoplasmic reticulum, golgi, plasma membrane 33.86 33.73
AT3G26200.1 Thale cress endoplasmic reticulum, golgi, plasma membrane 33.47 33.6
AT3G26320.1 Thale cress endoplasmic reticulum 33.47 33.6
AT3G26280.2 Thale cress extracellular, golgi, plasma membrane 34.86 33.59
AT3G53300.1 Thale cress endoplasmic reticulum, golgi 33.07 33.33
AT3G26270.1 Thale cress endoplasmic reticulum 33.27 33.33
AT3G26160.1 Thale cress endoplasmic reticulum 33.27 33.27
AT5G57260.1 Thale cress endoplasmic reticulum, extracellular, golgi 33.27 33.27
AT3G44250.1 Thale cress endoplasmic reticulum 33.07 33.27
AT3G53305.1 Thale cress golgi 22.31 33.14
AT3G26150.1 Thale cress endoplasmic reticulum 32.87 32.87
AT3G53290.1 Thale cress cytosol 26.49 32.68
AT5G35715.1 Thale cress cytosol, golgi 27.69 31.45
AT3G53280.1 Thale cress endoplasmic reticulum, extracellular, plasma membrane 30.28 30.52
Protein Annotations
Gene3D:1.10.630.10EntrezGene:827011MapMan:9.5.1.5.2UniProt:A0A178UZS6ProteinID:AAB71623.1ProteinID:AEE83323.1
EMBL:AF428469ArrayExpress:AT4G13770EnsemblPlantsGene:AT4G13770RefSeq:AT4G13770TAIR:AT4G13770RefSeq:AT4G13770-TAIR-G
EnsemblPlants:AT4G13770.1TAIR:AT4G13770.1EMBL:AY075697EMBL:AY102146Unigene:At.10433ProteinID:CAB36841.1
ProteinID:CAB78419.1Symbol:CYP83A1InterPro:Cyt_P450InterPro:Cyt_P450_CSInterPro:Cyt_P450_E_grp-IInterPro:Cyt_P450_sf
EMBL:D78599GO:GO:0003674GO:GO:0003824GO:GO:0004497GO:GO:0005488GO:GO:0005506
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005783GO:GO:0005789
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009605GO:GO:0009607GO:GO:0009625
GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016491GO:GO:0016705GO:GO:0016709
GO:GO:0019748GO:GO:0019761GO:GO:0020037GO:GO:0046872GO:GO:0055114InterPro:IPR036396
RefSeq:NP_193113.1ProteinID:OAO99165.1UniProt:P48421PFAM:PF00067PO:PO:0000013PO:PO:0000037
PO:PO:0000230PO:PO:0000293PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0004507
PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123
PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006PO:PO:0009009
PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032
PO:PO:0009046PO:PO:0009047PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137
PO:PO:0025022PRINTS:PR00385PRINTS:PR00463ScanProsite:PS00086PANTHER:PTHR24298PANTHER:PTHR24298:SF323
SUPFAM:SSF48264TMHMM:TMhelixEMBL:U18929UniParc:UPI0000000D4ASEG:seg:
Description
CYP83A1Cytochrome P450 83A1 [Source:UniProtKB/Swiss-Prot;Acc:P48421]
Coordinates
chr4:-:7990429..7992429
Molecular Weight (calculated)
57452.0 Da
IEP (calculated)
8.741
GRAVY (calculated)
-0.264
Length
502 amino acids
Sequence
(BLAST)
001: MEDIIIGVVA LAAVLLFFLY QKPKTKRYKL PPGPSPLPVI GNLLQLQKLN PQRFFAGWAK KYGPILSYRI GSRTMVVISS AELAKELLKT QDVNFADRPP
101: HRGHEFISYG RRDMALNHYT PYYREIRKMG MNHLFSPTRV ATFKHVREEE ARRMMDKINK AADKSEVVDI SELMLTFTNS VVCRQAFGKK YNEDGEEMKR
201: FIKILYGTQS VLGKIFFSDF FPYCGFLDDL SGLTAYMKEC FERQDTYIQE VVNETLDPKR VKPETESMID LLMGIYKEQP FASEFTVDNV KAVILDIVVA
301: GTDTAAAAVV WGMTYLMKYP QVLKKAQAEV REYMKEKGST FVTEDDVKNL PYFRALVKET LRIEPVIPLL IPRACIQDTK IAGYDIPAGT TVNVNAWAVS
401: RDEKEWGPNP DEFRPERFLE KEVDFKGTDY EFIPFGSGRR MCPGMRLGAA MLEVPYANLL LSFNFKLPNG MKPDDINMDV MTGLAMHKSQ HLKLVPEKVN
501: KY
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.