Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- golgi 5
- endoplasmic reticulum 5
- extracellular 8
- plasma membrane 4
- vacuole 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY59805 | Canola | extracellular | 59.27 | 69.07 |
| CDY22735 | Canola | extracellular | 58.18 | 67.8 |
| Bra037084.1-P | Field mustard | extracellular | 62.55 | 65.9 |
| CDY22936 | Canola | plasma membrane | 68.36 | 64.6 |
| Bra038089.1-P | Field mustard | extracellular | 58.18 | 62.5 |
| CDY09061 | Canola | extracellular | 57.45 | 61.72 |
| Bra039563.1-P | Field mustard | plasma membrane | 65.09 | 61.51 |
| CDY06505 | Canola | extracellular | 45.45 | 60.1 |
| CDY47794 | Canola | extracellular | 46.91 | 58.11 |
| VIT_03s0017g02260.t01 | Wine grape | extracellular | 41.09 | 57.95 |
| TraesCS7D01G020100.1 | Wheat | cytosol, plastid | 22.18 | 54.95 |
| VIT_03s0017g02200.t01 | Wine grape | extracellular | 39.64 | 52.15 |
| GSMUA_Achr2P01500_001 | Banana | endoplasmic reticulum, extracellular | 28.0 | 49.68 |
| TraesCS7D01G020000.1 | Wheat | plastid | 24.73 | 47.89 |
| TraesCS7A01G024100.1 | Wheat | plastid | 25.82 | 47.65 |
| TraesCS2B01G444500.1 | Wheat | extracellular | 28.0 | 46.95 |
| TraesCS2D01G422800.1 | Wheat | extracellular, plastid | 33.09 | 46.67 |
| TraesCS2D01G422700.1 | Wheat | extracellular | 27.64 | 46.34 |
| TraesCS2A01G424800.1 | Wheat | extracellular | 27.64 | 46.34 |
| Zm00001d026282_P001 | Maize | extracellular | 26.18 | 44.72 |
| Os06t0168700-01 | Rice | plastid | 39.27 | 43.9 |
| Os04t0612500-01 | Rice | endoplasmic reticulum, plasma membrane, vacuole | 14.18 | 43.82 |
| Zm00001d002347_P001 | Maize | extracellular | 22.91 | 43.45 |
| AT3G22120.2 | Thale cress | plastid | 55.27 | 43.3 |
| KRG90032 | Soybean | extracellular | 50.91 | 42.68 |
| OQU82307 | Sorghum | extracellular, plasma membrane | 21.82 | 40.54 |
| TraesCS7A01G024200.1 | Wheat | plastid | 32.36 | 40.09 |
| HORVU7Hr1G027440.2 | Barley | extracellular | 40.73 | 39.58 |
| KRH17654 | Soybean | extracellular | 54.55 | 39.06 |
| PGSC0003DMT400035207 | Potato | extracellular | 53.45 | 37.69 |
| HORVU2Hr1G099450.1 | Barley | endoplasmic reticulum | 25.09 | 35.94 |
| AT1G62500.1 | Thale cress | extracellular | 38.55 | 35.69 |
| TraesCS7B01G031800.1 | Wheat | extracellular | 41.45 | 35.51 |
| AT2G10940.2 | Thale cress | endoplasmic reticulum, plasma membrane | 37.09 | 35.05 |
| EER89284 | Sorghum | endoplasmic reticulum, vacuole | 41.09 | 34.88 |
| HORVU2Hr1G099370.2 | Barley | mitochondrion | 30.18 | 30.74 |
| HORVU2Hr1G099470.5 | Barley | extracellular | 37.09 | 21.52 |
| AT3G22142.1 | Thale cress | extracellular, plasma membrane, vacuole | 43.64 | 8.11 |
Protein Annotations
| Gene3D:1.10.110.10 | MapMan:35.2 | EntrezGene:827182 | ProteinID:AEE83562.1 | ArrayExpress:AT4G15160 | EnsemblPlantsGene:AT4G15160 |
| RefSeq:AT4G15160 | TAIR:AT4G15160 | RefSeq:AT4G15160-TAIR-G | EnsemblPlants:AT4G15160.1 | TAIR:AT4G15160.1 | Unigene:At.25327 |
| InterPro:Bifun_inhib/LTP/seed_sf | UniProt:F4JJE3 | InterPro:Hydrophob_seed | RefSeq:NP_193252.5 | PFAM:PF14547 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR01217 | PFscan:PS51257 | PANTHER:PTHR31731 | PANTHER:PTHR31731:SF52 |
| SUPFAM:SSF47699 | SignalP:SignalP-noTM | UniParc:UPI0001A7B3CA | SEG:seg | : | : |
Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JJE3]
Coordinates
chr4:+:8646150..8647252
Molecular Weight (calculated)
28938.3 Da
IEP (calculated)
9.636
GRAVY (calculated)
-0.291
Length
275 amino acids
Sequence
(BLAST)
(BLAST)
001: MALLHKQNIS FVILLLLGLL AVSYACDCSD PPKPSPHPVK PPKHPAKPPK PPTVKPPTHT PKPPTVKPPP PYIPCPPPPY TPKPPTVKPP PPPYVKPPPP
101: PTVKPPPPPY VKPPPPPTVK PPPPPTPYTP PPPTPYTPPP PTVKPPPPPV VTPPPPTPTP EAPCPPPPPT PYPPPPKPET CPIDALKLGA CVDVLGGLIH
201: IGLGKSYAKA KCCPLLDDLV GLDAAVCLCT TIRAKLLNID LIIPIALEVL VDCGKTPPPR GFKCPTPLKR TPLLG
101: PTVKPPPPPY VKPPPPPTVK PPPPPTPYTP PPPTPYTPPP PTVKPPPPPV VTPPPPTPTP EAPCPPPPPT PYPPPPKPET CPIDALKLGA CVDVLGGLIH
201: IGLGKSYAKA KCCPLLDDLV GLDAAVCLCT TIRAKLLNID LIIPIALEVL VDCGKTPPPR GFKCPTPLKR TPLLG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.