Factsheet for AT5G04940.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra009409.1-P	Field mustard	nucleus	81.94	82.56
Bra009408.1-P	Field mustard	nucleus	62.54	81.84
CDY11319	Canola	nucleus	78.21	81.24
Bra005829.1-P	Field mustard	nucleus	78.06	81.09
CDX80930	Canola	nucleus	77.46	80.59
CDX98804	Canola	nucleus	73.58	80.42
CDX98805	Canola	nucleus	78.21	80.0
Bra028776.1-P	Field mustard	nucleus	74.03	78.11
CDY14135	Canola	nucleus	74.03	68.7
AT1G73100.1	Thale cress	nucleus	59.4	59.49
KRH56252	Soybean	nucleus	18.21	57.28
VIT_13s0047g00120.t01	Wine grape	nucleus	59.7	55.87
CDX70182	Canola	nucleus	81.79	54.15
KRH62706	Soybean	nucleus	53.28	53.52
KRH20576	Soybean	nucleus	52.54	52.3
KRH13229	Soybean	nucleus	52.24	52.01
AT2G05900.1	Thale cress	cytoskeleton, cytosol, nucleus	22.39	48.08
Solyc09g082050.2.1	Tomato	nucleus	46.27	47.91
VIT_08s0040g00360.t01	Wine grape	nucleus	52.54	47.76
PGSC0003DMT400077329	Potato	nucleus	47.31	47.24
KRH66648	Soybean	nucleus	49.55	46.89
PGSC0003DMT400018512	Potato	nucleus	49.25	45.96
Solyc10g077070.1.1	Tomato	nucleus	48.96	45.94
GSMUA_Achr5P27620_001	Banana	nucleus	41.34	44.82
KRG95012	Soybean	plastid	32.24	44.26
EES19725	Sorghum	nucleus	42.84	42.58
Os05t0490700-01	Rice	extracellular	42.24	42.11
TraesCS1B01G378900.1	Wheat	nucleus	42.24	41.99
Zm00001d010646_P001	Maize	plastid	40.75	41.87
Zm00001d038541_P002	Maize	nucleus	43.13	41.76
TraesCS1A01G362000.1	Wheat	nucleus	42.09	41.72
TraesCS1D01G366800.1	Wheat	nucleus	42.09	41.72
Os12t0128450-00	Rice	nucleus	37.61	41.04
Os11t0131600-00	Rice	nucleus	40.45	40.81
TraesCS1D01G307700.1	Wheat	nucleus	40.9	40.65
TraesCS4B01G280000.1	Wheat	nucleus	43.88	40.55
TraesCS1B01G319000.1	Wheat	nucleus	40.75	40.5
TraesCS1A01G308300.1	Wheat	nucleus	40.45	40.21
TraesCS5A01G140500.1	Wheat	nucleus	39.85	39.15
TraesCS5D01G152000.1	Wheat	nucleus	40.0	38.95
EES01635	Sorghum	nucleus	42.99	38.81
Os01t0811300-01	Rice	nucleus, plasma membrane	42.54	38.72
AT1G17770.1	Thale cress	nucleus	39.85	38.53
TraesCS3A01G336100.1	Wheat	nucleus	42.54	38.26
Os11t0602200-01	Rice	nucleus	46.27	38.13
Zm00001d041005_P001	Maize	nucleus	39.7	38.05
TraesCS3A01G385200.1	Wheat	plastid	41.19	38.02
TraesCS3B01G366900.1	Wheat	nucleus	42.09	37.95
TraesCS3B01G367200.1	Wheat	nucleus	42.09	37.95
TraesCS3D01G329100.1	Wheat	nucleus	41.94	37.82
TraesCS4D01G278500.1	Wheat	nucleus	46.12	37.73
TraesCS5B01G138800.1	Wheat	nucleus	39.55	37.32
EES10399	Sorghum	nucleus	45.52	37.24
TraesCS4A01G023500.1	Wheat	nucleus	46.27	37.17
EER96081	Sorghum	nucleus	45.97	37.11
TraesCS3B01G417400.1	Wheat	nucleus	44.78	36.01
Zm00001d019195_P001	Maize	nucleus	45.82	35.86
Zm00001d043135_P003	Maize	nucleus	41.64	35.82
AT2G24740.1	Thale cress	nucleus	40.3	35.76
OQU78645	Sorghum	nucleus	39.7	35.66
TraesCS3D01G378200.1	Wheat	plastid	35.22	34.45
AT4G13460.2	Thale cress	nucleus	30.15	31.08
AT2G33290.2	Thale cress	nucleus	28.81	29.65
AT5G47150.1	Thale cress	cytosol	13.73	28.05
AT5G13960.1	Thale cress	nucleus	25.37	27.24
AT2G22740.1	Thale cress	nucleus	30.15	25.57
AT2G35160.3	Thale cress	nucleus	29.25	24.69
AT3G03750.2	Thale cress	nucleus	12.39	23.45
AT5G47160.1	Thale cress	mitochondrion	12.69	20.48
AT3G04380.1	Thale cress	nucleus	13.73	18.7
AT5G43990.9	Thale cress	nucleus	15.97	14.46
AT1G04050.1	Thale cress	nucleus	15.07	13.76
AT2G23740.2	Thale cress	nucleus	16.87	8.18
HORVU6Hr1G090170.1	Barley	cytosol	0.15	0.8

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.7	MapMan:12.5.1.16.1	Gene3D:2.170.270.10	Gene3D:2.30.280.10	EntrezGene:830376
EMBL:AB493737	ProteinID:AED90806.1	ProteinID:AED90807.1	EMBL:AF344444	ArrayExpress:AT5G04940	EnsemblPlantsGene:AT5G04940
RefSeq:AT5G04940	TAIR:AT5G04940	RefSeq:AT5G04940-TAIR-G	EnsemblPlants:AT5G04940.2	TAIR:AT5G04940.2	Unigene:At.8375
ProteinID:BAB11516.1	UniProt:C0SVN4	GO:GO:0000775	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005694
GO:GO:0006325	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008270
GO:GO:0009987	GO:GO:0016043	GO:GO:0016569	GO:GO:0016571	GO:GO:0016740	GO:GO:0018024
GO:GO:0019538	GO:GO:0032259	GO:GO:0034968	GO:GO:0040029	GO:GO:0046872	InterPro:Hist-Lys_N-MeTrfase_plant
InterPro:IPR001214	InterPro:IPR003105	InterPro:IPR003616	InterPro:IPR007728	InterPro:IPR025794	InterPro:IPR036987
RefSeq:NP_196113.1	RefSeq:NP_850767.1	PFAM:PF00856	PFAM:PF02182	PFAM:PF05033	PO:PO:0000013
PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081
PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103
PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005
PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030
PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030
PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PFscan:PS50280	PFscan:PS50867
PFscan:PS50868	PFscan:PS51015	PFscan:PS51575	PANTHER:PTHR22884	PANTHER:PTHR22884:SF415	InterPro:PUA-like_sf
InterPro:Post-SET_dom	InterPro:Pre-SET_dom	UniProt:Q9FF80	InterPro:SET_dom	SMART:SM00317	SMART:SM00466
SMART:SM00468	InterPro:SRA-YDG_sf	InterPro:SRA_YDG	SUPFAM:SSF82199	SUPFAM:SSF88697	Symbol:SUVH1
UniParc:UPI00000A3CB9	SEG:seg	:	:	:	:

Description

SUVH1Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FF80]

Coordinates

chr5:-:1454131..1457141

Molecular Weight (calculated)

74475.1 Da

IEP (calculated)

8.329

GRAVY (calculated)

-0.534

Length

670 amino acids

Sequence
(BLAST)

001: MERNGGHYTD KTRVLDIKPL RTLRPVFPSG NQAPPFVCAP PFGPFPPGFS SFYPFSSSQA NQHTPDLNQA QYPPQHQQPQ NPPPVYQQQP PQHASEPSLV
101: TPLRSFRSPD VSNGNAELEG STVKRRIPKK RPISRPENMN FESGINVADR ENGNRELVLS VLMRFDALRR RFAQLEDAKE AVSGIIKRPD LKSGSTCMGR
201: GVRTNTKKRP GIVPGVEIGD VFFFRFEMCL VGLHSPSMAG IDYLVVKGET EEEPIATSIV SSGYYDNDEG NPDVLIYTGQ GGNADKDKQS SDQKLERGNL
301: ALEKSLRRDS AVRVIRGLKE ASHNAKIYIY DGLYEIKESW VEKGKSGHNT FKYKLVRAPG QPPAFASWTA IQKWKTGVPS RQGLILPDMT SGVESIPVSL
401: VNEVDTDNGP AYFTYSTTVK YSESFKLMQP SFGCDCANLC KPGNLDCHCI RKNGGDFPYT GNGILVSRKP MIYECSPSCP CSTCKNKVTQ MGVKVRLEVF
501: KTANRGWGLR SWDAIRAGSF ICIYVGEAKD KSKVQQTMAN DDYTFDTTNV YNPFKWNYEP GLADEDACEE MSEESEIPLP LIISAKNVGN VARFMNHSCS
601: PNVFWQPVSY ENNSQLFVHV AFFAISHIPP MTELTYDYGV SRPSGTQNGN PLYGKRKCFC GSAYCRGSFG

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.