Factsheet for AT5G13960.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX70530	Canola	nucleus	76.28	78.94
Bra006226.1-P	Field mustard	nucleus	75.0	78.26
CDX78549	Canola	nucleus	75.48	77.98
VIT_14s0068g01090.t01	Wine grape	nucleus	53.85	64.0
KRG94709	Soybean	nucleus	28.85	59.8
GSMUA_Achr8P00500_001	Banana	extracellular	25.16	57.51
Solyc02g094520.2.1	Tomato	nucleus	55.77	51.4
KRH20251	Soybean	nucleus, plastid	54.49	51.36
KRH06819	Soybean	nucleus	58.49	50.69
Os01t0927000-01	Rice	nucleus	51.76	48.72
Zm00001d042272_P003	Maize	nucleus	52.24	48.51
OQU88147	Sorghum	nucleus	51.92	46.69
TraesCS3D01G433900.1	Wheat	nucleus	50.8	45.94
TraesCS3A01G441200.1	Wheat	nucleus	50.64	45.8
TraesCS3B01G475200.1	Wheat	nucleus	48.08	45.66
GSMUA_Achr8P00490_001	Banana	nucleus	25.48	43.92
HORVU3Hr1G096250.8	Barley	golgi, mitochondrion, nucleus, plastid	50.32	40.99
OQU77925	Sorghum	nucleus	49.36	40.85
Zm00001d011956_P002	Maize	mitochondrion, nucleus, plastid	44.23	37.91
TraesCS1D01G241500.1	Wheat	nucleus	47.6	36.26
TraesCS1A01G241600.2	Wheat	nucleus	47.44	36.14
AT2G05900.1	Thale cress	cytoskeleton, cytosol, nucleus	15.54	31.09
AT1G73100.1	Thale cress	nucleus	28.37	26.46
AT2G22740.1	Thale cress	nucleus	33.33	26.33
AT2G33290.2	Thale cress	nucleus	27.08	25.96
AT4G13460.2	Thale cress	nucleus	26.6	25.54
AT5G04940.2	Thale cress	nucleus	27.24	25.37
AT2G35160.3	Thale cress	nucleus	31.57	24.81
AT5G47150.1	Thale cress	cytosol	12.66	24.09
AT3G03750.2	Thale cress	nucleus	13.14	23.16
AT1G17770.1	Thale cress	nucleus	25.64	23.09
AT2G24740.1	Thale cress	nucleus	25.0	20.66
AT5G47160.1	Thale cress	mitochondrion	12.66	19.04
AT3G04380.1	Thale cress	nucleus	13.94	17.68
AT5G43990.9	Thale cress	nucleus	16.35	13.78
AT1G04050.1	Thale cress	nucleus	14.26	12.13
AT2G23740.2	Thale cress	nucleus	18.27	8.25

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.7	Gene3D:2.30.280.10	PDB:4QEN	PDB:4QEO	PDB:4QEP
EntrezGene:831244	ProteinID:AAO17392.1	ProteinID:AED91966.1	EMBL:AF344447	ProteinID:ANM70867.1	ArrayExpress:AT5G13960
EnsemblPlantsGene:AT5G13960	RefSeq:AT5G13960	TAIR:AT5G13960	RefSeq:AT5G13960-TAIR-G	EnsemblPlants:AT5G13960.1	TAIR:AT5G13960.1
Unigene:At.8330	ProteinID:BAB11124.1	EMBL:BT002313	GO:GO:0000166	GO:GO:0000775	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005694	GO:GO:0006139	GO:GO:0006259
GO:GO:0006325	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008270
GO:GO:0008327	GO:GO:0009987	GO:GO:0010216	GO:GO:0010385	GO:GO:0010428	GO:GO:0010429
GO:GO:0016043	GO:GO:0016569	GO:GO:0016571	GO:GO:0016740	GO:GO:0018022	GO:GO:0018024
GO:GO:0019538	GO:GO:0032259	GO:GO:0034968	GO:GO:0046872	GO:GO:0046974	GO:GO:0051567
InterPro:Hist-Lys_N-MeTrfase_plant	InterPro:IPR001214	InterPro:IPR003105	InterPro:IPR003616	InterPro:IPR007728	InterPro:IPR025794
InterPro:IPR036987	RefSeq:NP_001332445.1	RefSeq:NP_196900.1	PFAM:PF00856	PFAM:PF02182	PFAM:PF05033
PO:PO:0000013	PO:PO:0000037	PO:PO:0000084	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054
PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095
PO:PO:0007103	PO:PO:0007115	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005
PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030
PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020038
PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PFscan:PS50280	PFscan:PS50867	PFscan:PS50868
PFscan:PS51015	PFscan:PS51575	PANTHER:PTHR22884	PANTHER:PTHR22884:SF467	InterPro:PUA-like_sf	InterPro:Post-SET_dom
InterPro:Pre-SET_dom	UniProt:Q8GZB6	InterPro:SET_dom	SMART:SM00317	SMART:SM00466	SMART:SM00468
InterPro:SRA-YDG_sf	InterPro:SRA_YDG	SUPFAM:SSF82199	SUPFAM:SSF88697	Symbol:SUVH4	UniParc:UPI00000AC23B
SEG:seg	:	:	:	:	:

Description

SUVH4Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZB6]

Coordinates

chr5:+:4501403..4506250

Molecular Weight (calculated)

70059.7 Da

IEP (calculated)

8.634

GRAVY (calculated)

-0.510

Length

624 amino acids

Sequence
(BLAST)

001: MAGKRKRANA PDQTERRSSV RVQKVRQKAL DEKARLVQER VKLLSDRKSE ICVDDTELHE KEEENVDGSP KRRSPPKLTA MQKGKQKLSV SLNGKDVNLE
101: PHLKVTKCLR LFNKQYLLCV QAKLSRPDLK GVTEMIKAKA ILYPRKIIGD LPGIDVGHRF FSRAEMCAVG FHNHWLNGID YMSMEYEKEY SNYKLPLAVS
201: IVMSGQYEDD LDNADTVTYT GQGGHNLTGN KRQIKDQLLE RGNLALKHCC EYNVPVRVTR GHNCKSSYTK RVYTYDGLYK VEKFWAQKGV SGFTVYKYRL
301: KRLEGQPELT TDQVNFVAGR IPTSTSEIEG LVCEDISGGL EFKGIPATNR VDDSPVSPTS GFTYIKSLII EPNVIIPKSS TGCNCRGSCT DSKKCACAKL
401: NGGNFPYVDL NDGRLIESRD VVFECGPHCG CGPKCVNRTS QKRLRFNLEV FRSAKKGWAV RSWEYIPAGS PVCEYIGVVR RTADVDTISD NEYIFEIDCQ
501: QTMQGLGGRQ RRLRDVAVPM NNGVSQSSED ENAPEFCIDA GSTGNFARFI NHSCEPNLFV QCVLSSHQDI RLARVVLFAA DNISPMQELT YDYGYALDSV
601: HGPDGKVKQL ACYCGALNCR KRLY

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.