Factsheet for AT5G47150.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
mitochondrion 2
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY40567	Canola	mitochondrion	60.37	61.68
CDY28970	Canola	cytosol	46.95	61.6
Bra022109.1-P	Field mustard	cytosol	46.95	61.6
CDY40566	Canola	cytosol, plastid	51.52	59.72
CDY28971	Canola	mitochondrion	60.67	58.19
CDY33517	Canola	cytosol, mitochondrion, nucleus	57.01	56.33
CDX77744	Canola	cytosol	57.01	56.33
Bra024960.1-P	Field mustard	cytosol, mitochondrion, nucleus	57.01	56.33
Bra022108.1-P	Field mustard	mitochondrion	60.98	54.5
AT5G47160.1	Thale cress	mitochondrion	42.07	33.25
AT2G05900.1	Thale cress	cytoskeleton, cytosol, nucleus	14.02	14.74
AT2G22740.1	Thale cress	nucleus	33.23	13.8
AT5G04940.2	Thale cress	nucleus	28.05	13.73
AT1G73100.1	Thale cress	nucleus	25.91	12.71
AT5G13960.1	Thale cress	nucleus	24.09	12.66
AT2G35160.3	Thale cress	nucleus	30.18	12.47
AT4G13460.2	Thale cress	nucleus	21.95	11.08
AT2G33290.2	Thale cress	nucleus	21.95	11.06
AT2G24740.1	Thale cress	nucleus	23.78	10.33
AT1G17770.1	Thale cress	nucleus	20.43	9.67
AT5G43990.9	Thale cress	nucleus	9.76	4.32
AT1G04050.1	Thale cress	nucleus	7.01	3.13
AT3G03750.2	Thale cress	nucleus	3.05	2.82
AT2G23740.2	Thale cress	nucleus	8.84	2.1
AT3G04380.1	Thale cress	nucleus	1.83	1.22

Protein Annotations

Gene3D:2.30.280.10	MapMan:35.1	EntrezGene:834761	ProteinID:AED95476.1	ArrayExpress:AT5G47150	EnsemblPlantsGene:AT5G47150
RefSeq:AT5G47150	TAIR:AT5G47150	RefSeq:AT5G47150-TAIR-G	EnsemblPlants:AT5G47150.1	TAIR:AT5G47150.1	ProteinID:BAB11611.1
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	InterPro:IPR003105	InterPro:IPR036987
RefSeq:NP_199526.1	PFAM:PF02182	PO:PO:0001078	PO:PO:0001185	PO:PO:0007611	PO:PO:0007616
PO:PO:0009009	PO:PO:0009010	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009052
PO:PO:0025022	PFscan:PS51015	PANTHER:PTHR22884	PANTHER:PTHR22884:SF458	InterPro:PUA-like_sf	UniProt:Q9FHI0
SMART:SM00466	InterPro:SRA-YDG_sf	InterPro:SRA_YDG	SUPFAM:SSF88697	UniParc:UPI000009E62E	SEG:seg

Description

YDG domain-containing protein At5g47150 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHI0]

Coordinates

chr5:+:19149938..19151913

Molecular Weight (calculated)

36675.7 Da

IEP (calculated)

9.450

GRAVY (calculated)

-0.623

Length

328 amino acids

Sequence
(BLAST)

001: MSQKRSLVFA IRDFPPGCGT HIDVSSSLNH PAEKAFKHPR TGDVSGENLS FAEAKPEGTC LKRESADQDH IFAAPEHNAK REPAGQDHVV AATTVAYATS
101: SHRQKVEIGN SDCDPTPREK VLEVLSLFKQ VYNQLDRDKK ARRGGDFLDA TSRIDLKTLT VLEKMGKQVN TEKRIGSVPG INIGDVFQYK TELRVVGLHS
201: KPMCGIDYIK LGDDRITTSI VASEGYGYND TYNSGVMVYT GEGGNVINKQ KKTEDQKLVK GNLALATSMR QKSQVRVIRG EERLDRKGKR YVYDGLYMVE
301: EYWVERDVRG KSVYKFKLCR IPGQLPLT

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.