Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 4
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY33518 | Canola | nucleus | 44.1 | 50.27 |
| Bra024959.1-P | Field mustard | nucleus | 44.58 | 50.0 |
| CDX77745 | Canola | nucleus | 45.78 | 49.35 |
| AT5G47150.1 | Thale cress | cytosol | 33.25 | 42.07 |
| AT2G05900.1 | Thale cress | cytoskeleton, cytosol, nucleus | 11.08 | 14.74 |
| AT2G22740.1 | Thale cress | nucleus | 26.75 | 14.05 |
| AT2G35160.3 | Thale cress | nucleus | 26.51 | 13.85 |
| AT5G04940.2 | Thale cress | nucleus | 20.48 | 12.69 |
| AT5G13960.1 | Thale cress | nucleus | 19.04 | 12.66 |
| AT1G73100.1 | Thale cress | nucleus | 20.24 | 12.56 |
| AT4G13460.2 | Thale cress | nucleus | 18.07 | 11.54 |
| AT2G33290.2 | Thale cress | nucleus | 17.11 | 10.91 |
| AT1G17770.1 | Thale cress | nucleus | 17.35 | 10.39 |
| AT2G24740.1 | Thale cress | nucleus | 17.59 | 9.67 |
| AT5G43990.9 | Thale cress | nucleus | 6.51 | 3.65 |
| AT1G04050.1 | Thale cress | nucleus | 5.78 | 3.27 |
| AT2G23740.2 | Thale cress | nucleus | 7.23 | 2.17 |
| AT3G03750.2 | Thale cress | nucleus | 1.69 | 1.98 |
| AT3G04380.1 | Thale cress | nucleus | 1.69 | 1.42 |
Protein Annotations
| Gene3D:2.30.280.10 | MapMan:35.1 | EntrezGene:834762 | UniProt:A0A178UMA6 | ProteinID:AED95477.1 | ProteinID:ANM68749.1 |
| ProteinID:ANM68750.1 | ArrayExpress:AT5G47160 | EnsemblPlantsGene:AT5G47160 | RefSeq:AT5G47160 | TAIR:AT5G47160 | RefSeq:AT5G47160-TAIR-G |
| EnsemblPlants:AT5G47160.1 | TAIR:AT5G47160.1 | ProteinID:BAA97149.1 | EMBL:DQ447048 | EMBL:DQ653354 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | InterPro:IPR003105 | InterPro:IPR036987 | RefSeq:NP_001318752.1 |
| RefSeq:NP_001330473.1 | RefSeq:NP_199527.1 | ProteinID:OAO94883.1 | PFAM:PF02182 | PO:PO:0000037 | PO:PO:0001078 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009031 | PO:PO:0009046 | PO:PO:0009052 | PO:PO:0025022 | PFscan:PS51015 | PANTHER:PTHR22884 |
| PANTHER:PTHR22884:SF458 | InterPro:PUA-like_sf | UniProt:Q9LVU3 | SMART:SM00466 | InterPro:SRA-YDG_sf | InterPro:SRA_YDG |
| SUPFAM:SSF88697 | UniParc:UPI000009FABB | : | : | : | : |
Description
YDG domain-containing protein At5g47160 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVU3]
Coordinates
chr5:+:19155976..19158249
Molecular Weight (calculated)
47190.9 Da
IEP (calculated)
10.677
GRAVY (calculated)
-0.740
Length
415 amino acids
Sequence
(BLAST)
(BLAST)
001: MMMTQRISPS NKRRRVSFVR DFPQFSVKDE SDIGGDDVAT IKENLDGKED SNCVGVAYRD HHRPKEESFD SIMKKAGFNV ANGNLGNGKF PPSKRNVPLP
101: CEGKVQPLSV EEGIKLMAYE SQRRRCFGKP LVSTKVVQKH RYSPAKKKLS NATALRVRHS PMKKLSNASR LRANAHRPTQ HKDERRSGVL SVIQRNRLSK
201: DLTPRQKVQE VLRIFTLVFD ELDRNKAARR GGSETAKSRI DYQTWTILRE MGMQVNSQKR IGSVPGIKVG DKIQFKAALS VIGLHFGIMS GIDYMYKGNK
301: EVATSIVSSE GNDYGDRFIN DVMIYCGQGG NMRSKDHKAI KDQKLVGGNL ALANSIKEKT PVRVIRGERR LDNRGKDYVY DGLYRVEKYW EERGPQGNIL
401: FKFKLRRTCQ PYVDF
101: CEGKVQPLSV EEGIKLMAYE SQRRRCFGKP LVSTKVVQKH RYSPAKKKLS NATALRVRHS PMKKLSNASR LRANAHRPTQ HKDERRSGVL SVIQRNRLSK
201: DLTPRQKVQE VLRIFTLVFD ELDRNKAARR GGSETAKSRI DYQTWTILRE MGMQVNSQKR IGSVPGIKVG DKIQFKAALS VIGLHFGIMS GIDYMYKGNK
301: EVATSIVSSE GNDYGDRFIN DVMIYCGQGG NMRSKDHKAI KDQKLVGGNL ALANSIKEKT PVRVIRGERR LDNRGKDYVY DGLYRVEKYW EERGPQGNIL
401: FKFKLRRTCQ PYVDF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.