Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 7
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra029075.1-P | Field mustard | plasma membrane | 85.19 | 85.62 |
| CDY54343 | Canola | plasma membrane | 84.69 | 85.26 |
| CDY47068 | Canola | plasma membrane | 84.69 | 85.12 |
| GSMUA_Achr8P19840_001 | Banana | plasma membrane | 37.27 | 46.86 |
| AT1G64210.1 | Thale cress | plasma membrane | 45.76 | 46.85 |
| AT5G41680.1 | Thale cress | mitochondrion | 27.29 | 45.68 |
| TraesCS3B01G175300.1 | Wheat | plasma membrane | 47.42 | 44.81 |
| AT5G24100.1 | Thale cress | plasma membrane | 45.76 | 44.79 |
| TraesCS3D01G156100.1 | Wheat | plasma membrane | 47.25 | 44.65 |
| TraesCS3A01G148400.1 | Wheat | plasma membrane | 47.09 | 44.64 |
| AT4G23740.1 | Thale cress | plasma membrane | 46.92 | 44.2 |
| AT3G08680.2 | Thale cress | plasma membrane | 45.42 | 42.66 |
| KXG31530 | Sorghum | plasma membrane | 47.25 | 42.58 |
| Zm00001d039325_P001 | Maize | plasma membrane | 46.42 | 42.47 |
| GSMUA_Achr5P06820_001 | Banana | plasma membrane | 40.93 | 42.41 |
| GSMUA_Achr10P... | Banana | plasma membrane | 37.1 | 42.08 |
| Zm00001d008965_P001 | Maize | plasma membrane | 46.09 | 41.22 |
| GSMUA_Achr7P14210_001 | Banana | plasma membrane | 37.94 | 40.43 |
| AT5G58300.1 | Thale cress | plasma membrane | 42.43 | 38.99 |
| AT2G26730.1 | Thale cress | plasma membrane | 42.1 | 38.45 |
| AT5G05160.1 | Thale cress | plasma membrane | 40.1 | 37.66 |
| AT3G17840.1 | Thale cress | plasma membrane | 38.94 | 36.17 |
| HORVU3Hr1G030090.5 | Barley | cytosol | 41.43 | 35.22 |
| AT1G48480.1 | Thale cress | plasma membrane | 37.77 | 34.66 |
| AT1G68400.1 | Thale cress | plasma membrane | 38.27 | 34.33 |
| AT3G02880.1 | Thale cress | plasma membrane | 34.78 | 33.33 |
| AT5G16590.1 | Thale cress | plasma membrane | 33.94 | 32.64 |
| AT2G36570.1 | Thale cress | plasma membrane | 36.44 | 32.59 |
| AT1G60630.1 | Thale cress | vacuole | 32.78 | 30.21 |
| AT1G10850.1 | Thale cress | plasma membrane | 33.11 | 30.02 |
| AT3G50230.2 | Thale cress | plasma membrane | 30.95 | 27.68 |
| AT5G67200.1 | Thale cress | plasma membrane | 30.62 | 27.5 |
| AT5G43020.1 | Thale cress | plasma membrane | 28.62 | 25.71 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.1.3 | Gene3D:3.30.200.20 | Gene3D:3.80.10.10 | EntrezGene:835413 | UniProt:A0A178U756 |
| ProteinID:AED96339.1 | EMBL:AK227151 | ArrayExpress:AT5G53320 | EnsemblPlantsGene:AT5G53320 | RefSeq:AT5G53320 | TAIR:AT5G53320 |
| RefSeq:AT5G53320-TAIR-G | EnsemblPlants:AT5G53320.1 | TAIR:AT5G53320.1 | Unigene:At.70289 | UniProt:B3LFA9 | ProteinID:BAB09794.1 |
| EMBL:BT033097 | EMBL:FJ708801 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 |
| GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016301 | GO:GO:0016310 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR000719 |
| InterPro:IPR001611 | InterPro:IPR032675 | InterPro:Kinase-like_dom_sf | InterPro:LRR_N_plant-typ | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt |
| RefSeq:NP_200144.1 | ProteinID:OAO89686.1 | PFAM:PF00560 | PFAM:PF07714 | PFAM:PF08263 | PO:PO:0000005 |
| PO:PO:0000293 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009031 | PO:PO:0020100 | PFscan:PS50011 |
| PANTHER:PTHR27008 | PANTHER:PTHR27008:SF51 | InterPro:Prot_kinase_dom | UniProt:Q9FK10 | SUPFAM:SSF52058 | SUPFAM:SSF56112 |
| InterPro:Ser-Thr/Tyr_kinase_cat_dom | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0000048C5E | SEG:seg | : |
Description
At5g53320 [Source:UniProtKB/TrEMBL;Acc:B3LFA9]
Coordinates
chr5:-:21636241..21638398
Molecular Weight (calculated)
66866.7 Da
IEP (calculated)
8.071
GRAVY (calculated)
-0.130
Length
601 amino acids
Sequence
(BLAST)
(BLAST)
001: MKCQVVLILI VVIFNVCIEA ETIKEDKHTL LQFVNNINHS HSLNWSPSLS ICTKWTGVTC NSDHSSVDAL HLAATGLRGD IELSIIARLS NLRFLILSSN
101: NISGTFPTTL QALKNLTELK LDFNEFSGPL PSDLSSWERL QVLDLSNNRF NGSIPSSIGK LTLLHSLNLA YNKFSGEIPD LHIPGLKLLN LAHNNLTGTV
201: PQSLQRFPLS AFVGNKVLAP VHSSLRKHTK HHNHVVLGIA LSVCFAILAL LAILLVIIIH NREEQRRSSK DKPSKRRKDS DPNVGEGDNK IVFFEGKNLV
301: FDLEDLLRAS AEVLGKGPFG TTYKVDLEDS ATIVVKRIKE VSVPQREFEQ QIENIGSIKH ENVATLRGYF YSKDEKLVVY DYYEHGSLST LLHGQKGLRD
401: RKRLEWETRL NMVYGTARGV AHIHSQSGGK LVHGNIKSSN IFLNGKGYGC ISGTGMATLM HSLPRHAVGY RAPEITDTRK GTQPSDVYSF GILIFEVLTG
501: KSEVANLVRW VNSVVREEWT GEVFDEELLR CTQVEEEMVE MLQVGMVCTA RLPEKRPNMI EVVRMVEEIR PEKLASGYRS EVSTGATTTP IGSLSGSPYI
601: L
101: NISGTFPTTL QALKNLTELK LDFNEFSGPL PSDLSSWERL QVLDLSNNRF NGSIPSSIGK LTLLHSLNLA YNKFSGEIPD LHIPGLKLLN LAHNNLTGTV
201: PQSLQRFPLS AFVGNKVLAP VHSSLRKHTK HHNHVVLGIA LSVCFAILAL LAILLVIIIH NREEQRRSSK DKPSKRRKDS DPNVGEGDNK IVFFEGKNLV
301: FDLEDLLRAS AEVLGKGPFG TTYKVDLEDS ATIVVKRIKE VSVPQREFEQ QIENIGSIKH ENVATLRGYF YSKDEKLVVY DYYEHGSLST LLHGQKGLRD
401: RKRLEWETRL NMVYGTARGV AHIHSQSGGK LVHGNIKSSN IFLNGKGYGC ISGTGMATLM HSLPRHAVGY RAPEITDTRK GTQPSDVYSF GILIFEVLTG
501: KSEVANLVRW VNSVVREEWT GEVFDEELLR CTQVEEEMVE MLQVGMVCTA RLPEKRPNMI EVVRMVEEIR PEKLASGYRS EVSTGATTTP IGSLSGSPYI
601: L
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.