Factsheet for Bra001852.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plasma membrane 5
extracellular 8
endoplasmic reticulum 5
golgi 5
vacuole 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_03s0017g02260.t01	Wine grape	extracellular	42.53	56.92
Bra039563.1-P	Field mustard	plasma membrane	62.45	56.01
Bra031329.1-P	Field mustard	extracellular	72.41	55.59
VIT_03s0017g02200.t01	Wine grape	extracellular	44.06	55.02
Bra038089.1-P	Field mustard	extracellular	53.26	54.3
TraesCS7D01G020100.1	Wheat	cytosol, plastid	22.99	54.05
Bra037084.1-P	Field mustard	extracellular	53.64	53.64
Bra023850.1-P	Field mustard	extracellular	46.36	52.61
GSMUA_Achr2P01500_001	Banana	endoplasmic reticulum, extracellular	30.65	51.61
AT3G22120.2	Thale cress	plastid	65.9	49.0
TraesCS2D01G422700.1	Wheat	extracellular	30.65	48.78
TraesCS2B01G444500.1	Wheat	extracellular	30.65	48.78
TraesCS7A01G024100.1	Wheat	plastid	27.2	47.65
TraesCS7D01G020000.1	Wheat	plastid	25.67	47.18
TraesCS2A01G424800.1	Wheat	extracellular	29.5	46.95
Zm00001d002347_P001	Maize	extracellular	25.67	46.21
TraesCS2D01G422800.1	Wheat	extracellular, plastid	34.48	46.15
OQU82307	Sorghum	extracellular, plasma membrane	24.52	43.24
Zm00001d026282_P001	Maize	extracellular	26.44	42.86
Os04t0612500-01	Rice	endoplasmic reticulum, plasma membrane, vacuole	14.18	41.57
Os06t0168700-01	Rice	plastid	38.7	41.06
KRG90032	Soybean	extracellular	48.28	38.41
TraesCS7A01G024200.1	Wheat	plastid	32.57	38.29
Bra037196.1-P	Field mustard	endoplasmic reticulum, plasma membrane	36.78	37.8
Bra027040.1-P	Field mustard	extracellular	42.15	35.95
HORVU2Hr1G099450.1	Barley	endoplasmic reticulum	26.44	35.94
HORVU7Hr1G027440.2	Barley	extracellular	38.7	35.69
EER89284	Sorghum	endoplasmic reticulum, vacuole	41.76	33.64
HORVU2Hr1G099370.2	Barley	mitochondrion	34.1	32.96
KRH17654	Soybean	extracellular	47.89	32.55
PGSC0003DMT400035207	Potato	extracellular	47.13	31.54
TraesCS7B01G031800.1	Wheat	extracellular	38.7	31.46
HORVU2Hr1G099470.5	Barley	extracellular	34.48	18.99
AT3G22142.1	Thale cress	extracellular, plasma membrane, vacuole	49.43	8.72

Protein Annotations

Gene3D:1.10.110.10	MapMan:35.1	InterPro:Bifun_inhib/LTP/seed_sf	EnsemblPlantsGene:Bra001852	EnsemblPlants:Bra001852.1	EnsemblPlants:Bra001852.1-P
InterPro:Hydrophob_seed	UniProt:M4CCC2	PFAM:PF14547	PRINTS:PR01217	PFscan:PS51257	PANTHER:PTHR31731
PANTHER:PTHR31731:SF52	SUPFAM:SSF47699	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00025406B7	SEG:seg

Description

AT3G22120 (E=7e-041) CWLP | CWLP (CELL WALL-PLASMA MEMBRANE LINKER PROTEIN); lipid binding

Coordinates

chrA03:-:18876675..18877460

Molecular Weight (calculated)

27237.0 Da

IEP (calculated)

10.393

GRAVY (calculated)

-0.386

Length

261 amino acids

Sequence
(BLAST)

001: MGSRTQNLSF LIFLFLGFLA VSFACDCSPP KQPPHPHKPP KHPSKPPKPP AVKPPKPPTV KPHPHPKPPT KPPTVKPHPH PKPPTKPHPT PKPPTKPPTV
101: KPPPSTPKPP TKPPTVKPPP STPKPPTHTP PPVVTPPSPC PPPPPSPCPP PPVVTPPTPS PPVVTPPTPT PPKPETCPID TLKLGACVDV LGGLIHIGLG
201: KTHAKEKCCP VLGGLVDLDA AVCLCTTIKA KLLNIDLIIP IALEVLVACG KTPPPGFKCP A

Best Arabidopsis Sequence Match ( AT3G22142.1 )
(BLAST)

0001: MGFRTRNLSF LILLLLNFFA ATYARECSPP KPSPKPHKPP KHSVVPPKPP AVKPHPHPKP PTIKPPPPKR HPHPKPPTVK PHPHPKPPTK PHPHPKPPTK
0101: PHPHPKPPTI KPPPHPKPRP HPKPPNVKPH PHPKPPTKPH PHPKPPTKHH PHPKPPTIKP PPKPPSVKPP PSTPKPPTTN PPPSTPQPPT HKPPPCTPTP
0201: PVASPPMATP PTQMPPIATP PIAKSPVATP PIATPPTATP PITIPPVATP PITTPPIANP PIIMPPIATP PVAAPPITNP PISKPPVTTP PTTTPPIAKP
0301: PIATPPISTP PAATPPAATP PITTLPPAKP PVAISPIVTP PVTPIAQPPV ATPPTATPPV ATPPIATPPT SKSPISTPPI SESPVATPPT ATSPIKTPPP
0401: AKPPVATPPI AKSPIATPPT ATPPVATPPI EKPPVATPPT TTPPTATPPV AKPPVETPPI ATPPTAKPPI STPPISKPPV ATPPAATPPI TTPTPVKPPV
0501: ATPPLAIPPV AKPPVVTPPT ATPPIATPPI AKSPVATPPT ATPPVATPPI AKPPVVTPPT TTPPTATPPV AKPPVATPPI ATPPTAKPPI STPPISKSPV
0601: ATPPAATPPI TTPPPAKPPV ATPPIATPPI AKPPVATPPT ATPPIATSPV AKPPVATPPI KTPPPAKPPV AIPPIATPPV AKPPVATPPT ATPPIATPPI
0701: ATPPVVTPPT ATPPVATPPI AKPPTTIPPT ATPPVAMPPI ATPPTAKPPI ATPPIAIPPV AKPPVVTPPT ATPPIATPPI AKSPVATPPT ATPPVATPPI
0801: AKPPVATPPT TAPPTATPPV AKPPVATPPI ATPPTAKPPI LTPPISKPPV ATPPAATPPI TTPPPAKPPV ATPPIATPPI AKPPVATPPT ATPPIATSPV
0901: AKPPVAIPPI KTPPPAKPPV AIPPIATPPV AKPPVATPPT ATPPIATSPI ATPPVVTPPT ATSPVATPPI AKPPTTTPPT ATPPVAMPPI ATPPTAKPPV
1001: ATPPIANPPV EKPPVATPPI AKPPTVLPPI AKPPVETSPT ATPPTATPPV AIPPVVKPPV AIPPITKPPV ATPPVTNPPT AMPPIVTPPP IVTPPIAKSP
1101: IATPPVSTPP IAKPPIATPP VATTPIAKPP IATPPTANPP VANPPIAKSP IAKPPIATPP TAMPSIATPP IGKPPVATPP MAKPPVASPP IATPPIIKPP
1201: VATPPITKPP VATPPVATPP IAKPPVATSP IETPPVAKPP VTTPPVATPP IVKPPIVTPP IATPPIAKSP IAPPPIGTPP IAKPPVATPP TATPPVATSP
1301: IAKPPVATPP PATPPVAKPP VATPPTVTPP VATPPIAKPP GARPPVATPP VATPPIAKSP VATPPMTKPP VASSPIATPP IAKTPIATPP TTMPKTCPID
1401: TLKLGSCVDL LGGLVHIGIG KSAKEKCCPV VEGLVDLDAA VCLCTTIKAK LLNIDVILPI ALEVLLNCGK NPPPGFKCPA

Arabidopsis Description

Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LIE8]
SUBAcon: [plasma membrane,vacuole,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.