Factsheet for Bra004258.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY56214	Canola	nucleus	84.87	98.36
AT1G17770.1	Thale cress	nucleus	38.85	51.52
AT2G24740.1	Thale cress	nucleus	39.28	47.81
Bra025949.1-P	Field mustard	nucleus	44.18	45.46
Bra009408.1-P	Field mustard	nucleus	25.24	45.31
Bra016018.1-P	Field mustard	nucleus	32.97	44.76
Bra028776.1-P	Field mustard	nucleus	29.16	42.2
Bra005829.1-P	Field mustard	nucleus	29.05	41.4
CDY01852	Canola	plasma membrane	82.81	41.0
Bra009409.1-P	Field mustard	nucleus	28.73	39.7
Bra005362.1-P	Field mustard	nucleus	17.52	39.36
TraesCS4B01G280000.1	Wheat	nucleus	28.73	36.41
Zm00001d010646_P001	Maize	plastid	25.57	36.04
Os12t0128450-00	Rice	nucleus	23.94	35.83
TraesCS3A01G385200.1	Wheat	plastid	27.53	34.85
Os05t0490700-01	Rice	extracellular	25.46	34.82
GSMUA_Achr5P27620_001	Banana	nucleus	23.39	34.79
Os11t0131600-00	Rice	nucleus	24.7	34.19
TraesCS1B01G378900.1	Wheat	nucleus	25.03	34.12
EES10399	Sorghum	nucleus	30.36	34.07
TraesCS1D01G366800.1	Wheat	nucleus	25.03	34.02
TraesCS1A01G362000.1	Wheat	nucleus	24.92	33.88
TraesCS1D01G307700.1	Wheat	nucleus	24.81	33.83
TraesCS1A01G308300.1	Wheat	nucleus	24.81	33.83
EES19725	Sorghum	nucleus	24.81	33.83
Zm00001d038541_P002	Maize	nucleus	25.46	33.81
TraesCS1B01G319000.1	Wheat	nucleus	24.7	33.68
TraesCS4D01G278500.1	Wheat	nucleus	29.92	33.58
TraesCS5A01G140500.1	Wheat	nucleus	24.59	33.14
EER96081	Sorghum	nucleus	29.92	33.13
TraesCS4A01G023500.1	Wheat	nucleus	29.92	32.97
TraesCS5D01G152000.1	Wheat	nucleus	24.59	32.85
EES01635	Sorghum	nucleus	26.22	32.48
TraesCS3B01G417400.1	Wheat	nucleus	29.38	32.41
Zm00001d019195_P001	Maize	nucleus	29.92	32.13
TraesCS5B01G138800.1	Wheat	nucleus	24.81	32.11
Os11t0602200-01	Rice	nucleus	28.29	31.98
Zm00001d041005_P001	Maize	nucleus	24.27	31.9
OQU78645	Sorghum	nucleus	25.57	31.5
Os01t0811300-01	Rice	nucleus, plasma membrane	25.03	31.25
TraesCS3A01G336100.1	Wheat	nucleus	25.14	31.01
Zm00001d043135_P003	Maize	nucleus	26.22	30.94
TraesCS3D01G329100.1	Wheat	nucleus	24.92	30.82
TraesCS3B01G366900.1	Wheat	nucleus	24.81	30.69
TraesCS3B01G367200.1	Wheat	nucleus	24.81	30.69
TraesCS3D01G378200.1	Wheat	plastid	22.74	30.51
Bra022109.1-P	Field mustard	cytosol	8.16	30.0
Bra007048.1-P	Field mustard	nucleus	20.13	29.32
Bra021840.1-P	Field mustard	nucleus, plastid	19.26	27.79
Bra005511.1-P	Field mustard	plastid	17.3	25.94
Bra006226.1-P	Field mustard	nucleus	16.76	25.75
Bra031976.1-P	Field mustard	nucleus	9.36	24.93
Bra024960.1-P	Field mustard	cytosol, mitochondrion, nucleus	8.6	23.8
Bra030212.1-P	Field mustard	nucleus	19.91	23.11
Bra024959.1-P	Field mustard	nucleus	8.71	21.62
Bra022108.1-P	Field mustard	mitochondrion	8.6	21.53
Bra036004.1-P	Field mustard	nucleus	10.66	15.68
Bra033710.1-P	Field mustard	nucleus	10.55	12.93
Bra039210.1-P	Field mustard	plastid	3.92	11.76
Bra001104.1-P	Field mustard	nucleus	9.03	10.98
Bra040197.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	9.9	9.66
Bra032148.1-P	Field mustard	nucleus	11.86	7.98

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.7	Gene3D:2.170.270.10	Gene3D:2.30.280.10	EnsemblPlantsGene:Bra004258	EnsemblPlants:Bra004258.1
EnsemblPlants:Bra004258.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005694	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0008168	GO:GO:0008270	GO:GO:0009987	GO:GO:0016043	GO:GO:0016571
GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0032259	GO:GO:0034968	InterPro:Hist-Lys_N-MeTrfase_plant
InterPro:IPR001214	InterPro:IPR003105	InterPro:IPR003616	InterPro:IPR007728	InterPro:IPR025794	InterPro:IPR036987
UniProt:M4CJ74	PFAM:PF00856	PFAM:PF02182	PFAM:PF05033	PFscan:PS50280	PFscan:PS50867
PFscan:PS50868	PFscan:PS51015	PFscan:PS51575	PANTHER:PTHR22884	PANTHER:PTHR22884:SF415	InterPro:PUA-like_sf
InterPro:Post-SET_dom	InterPro:Pre-SET_dom	InterPro:SET_dom	SMART:SM00317	SMART:SM00466	SMART:SM00468
InterPro:SRA-YDG_sf	InterPro:SRA_YDG	SUPFAM:SSF82199	SUPFAM:SSF88697	UniParc:UPI00025416C5	SEG:seg

Description

AT1G17770 (E=1e-191) SUVH7, SDG17 | SUVH7 (SU(VAR)3-9 HOMOLOG 7); DNA binding / histone-lysine N-methyltransferase/ zinc ion binding

Coordinates

chrA07:+:17683620..17686540

Molecular Weight (calculated)

102721.0 Da

IEP (calculated)

4.915

GRAVY (calculated)

-0.523

Length

919 amino acids

Sequence
(BLAST)

001: MSPTKTNGLR SWSVESDDDN NPIENISSPP TSLMVSPFRF FDDETYYTTP YLPSTVSSFQ TIIDEAIFDE TYNPTTFYPL IDSPFQTLDD QPFNITYPST
101: LEVGPLQTVD DENRNTKPPP PLDVPPLPTI NGETHKTEPP LPTLEITLPQ TVDNNINNTP PPTLEVLPLP TIDGEPHKAE PPLPTLEITL LQTVDNNINN
201: TPPPTLEVPL LPTIDAEAHK TEPPLPTLEI TLLQTVDNNI NNTPPPPLEF PPLPTIDGEP HIIEPPLPTL EITLLQTVDN NINKTPLPPL EFPPLPTLDA
301: EAHKTEPPLS TLEITLLQTV DNNSNNTPPP PPMVSLLQAI VPYETNKDSI AATDGPSSGA IKRKRGRPRG SKNSKTAIQK PKPYDSNSKV VTSCPSFDSG
401: ISEAERETGN KEVADSVLMR FDAVRRRLCQ LKCFKGPLLP TALANCKNLG VKTNAKKRIG SIPGVNVGDI FYYWGEMSLV GLHMLMVAGI DYLTIKDGAT
501: EGPLATSVVT SGRYDDETED TQTLIYIGHG RKTRDQELRG GNSALKESKL KGNEVRVIRG EEDPNNKGRK IYIYDGLYIV SDSWAAKGKS GFKEFRFKLL
601: RKPDQPAGYA NWKSSKNWSK CTDNSRKGLI LQDLSYGAET LPVPLVNEID ENDKEMPQDF SYVNSSTCPS MTIVQNYQST ACIDCHQVQL CEDPTCICVQ
701: RNGGDLPYHN RILVCRKPMV YECGDMCPCP PDCHNRVTQT GLKIRVEVFK TEKCGWGLRS LEPIRAGTFI CQLIGMAKRI HDVDEHDEYV FDSSRVYNQF
801: KWNYEPELVG EDCWDQVPEA YKLRWRMVVS SKAYGNVSRF MNHSCYPNVM WQPVEYEDSR QPCVRIAFFA MKHIPPLTEL RYDYGMSCRT EEVGEDGKTI
901: FKGKKICHCG SFKCQGSFG

Best Arabidopsis Sequence Match ( AT1G17770.1 )
(BLAST)

001: MDKSIPIKAI PVACVRPDLV DDVTKNTSTI PTMVSPVLTN MPSATSPLLM VPPLRTIWPS NKEWYDGDAG PSSTGPIKRE ASDNTNDTAH NTFAPPPEMV
101: IPLITIRPSD DSSNYSCDAG AGPSTGPVKR GRGRPKGSKN STPTEPKKPK VYDPNSLKVT SRGNFDSEIT EAETETGNQE IVDSVMMRFD AVRRRLCQIN
201: HPEDILTTAS GNCTKMGVKT NTRRRIGAVP GIHVGDIFYY WGEMCLVGLH KSNYGGIDFF TAAESAVEGH AAMCVVTAGQ YDGETEGLDT LIYSGQGGTD
301: VYGNARDQEM KGGNLALEAS VSKGNDVRVV RGVIHPHENN QKIYIYDGMY LVSKFWTVTG KSGFKEFRFK LVRKPNQPPA YAIWKTVENL RNHDLIDSRQ
401: GFILEDLSFG AELLRVPLVN EVDEDDKTIP EDFDYIPSQC HSGMMTHEFH FDRQSLGCQN CRHQPCMHQN CTCVQRNGDL LPYHNNILVC RKPLIYECGG
501: SCPCPDHCPT RLVQTGLKLH LEVFKTRNCG WGLRSWDPIR AGTFICEFAG LRKTKEEVEE DDDYLFDTSK IYQRFRWNYE PELLLEDSWE QVSEFINLPT
601: QVLISAKEKG NVGRFMNHSC SPNVFWQPIE YENRGDVYLL IGLFAMKHIP PMTELTYDYG VSCVERSEED EVLLYKGKKT CLCGSVKCRG SFT

Arabidopsis Description

SUVH7Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH7 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5P1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.