Factsheet for Bra005362.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plasma membrane 1
extracellular 1
endoplasmic reticulum 1
golgi 1
vacuole 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31670	Canola	nucleus	99.76	56.9
CDX84255	Canola	nucleus	97.8	55.48
VIT_16s0013g00310.t01	Wine grape	nucleus	55.01	48.7
TraesCS3A01G520700.1	Wheat	nucleus	32.27	45.83
PGSC0003DMT400054167	Potato	nucleus	49.14	41.7
Solyc03g093720.1.1	Tomato	nucleus	30.56	41.67
VIT_16s0013g00650.t01	Wine grape	nucleus	54.77	38.49
AT2G35160.3	Thale cress	nucleus	70.66	36.4
Solyc03g093740.1.1	Tomato	nucleus	26.41	35.18
Bra030212.1-P	Field mustard	nucleus	66.75	34.47
PGSC0003DMT400080404	Potato	nucleus, plastid	48.66	32.57
KRG90121	Soybean	nucleus	42.05	31.16
Bra009408.1-P	Field mustard	nucleus	38.88	31.05
PGSC0003DMT400092528	Potato	cytosol	15.89	30.37
Bra006226.1-P	Field mustard	nucleus	42.79	29.26
PGSC0003DMT400080391	Potato	nucleus	31.78	28.95
TraesCS3B01G590300.1	Wheat	nucleus	43.03	28.03
Bra031976.1-P	Field mustard	nucleus	22.25	26.38
Bra028776.1-P	Field mustard	nucleus	40.83	26.3
Solyc03g093760.1.1	Tomato	nucleus	50.37	25.85
PGSC0003DMT400054163	Potato	extracellular, nucleus	51.59	25.12
Solyc03g093710.1.1	Tomato	nucleus	50.86	24.82
Bra005829.1-P	Field mustard	nucleus	39.12	24.81
PGSC0003DMT400054154	Potato	nucleus	50.86	24.53
Bra009409.1-P	Field mustard	nucleus	39.12	24.06
Bra022109.1-P	Field mustard	cytosol	14.67	24.0
Bra016018.1-P	Field mustard	nucleus	39.36	23.78
Solyc03g093700.1.1	Tomato	nucleus	48.41	23.6
Bra021840.1-P	Field mustard	nucleus, plastid	36.43	23.39
Bra007048.1-P	Field mustard	nucleus	35.94	23.3
PGSC0003DMT400080398	Potato	nucleus	50.12	23.3
EES05802	Sorghum	nucleus	43.52	22.62
Bra005511.1-P	Field mustard	plastid	33.74	22.51
Os04t0544100-01	Rice	nucleus	45.23	22.0
EES12588	Sorghum	nucleus	45.72	20.99
TraesCS2D01G389100.1	Wheat	nucleus	46.7	19.9
TraesCS2B01G409600.1	Wheat	nucleus	46.7	19.85
Solyc03g093770.1.1	Tomato	golgi, plasma membrane	19.56	19.75
TraesCS2A01G389600.1	Wheat	mitochondrion, nucleus	46.7	18.95
Bra004258.1-P	Field mustard	nucleus	39.36	17.52
Bra025949.1-P	Field mustard	nucleus	37.9	17.36
Bra024960.1-P	Field mustard	cytosol, mitochondrion, nucleus	13.69	16.87
Bra024959.1-P	Field mustard	nucleus	15.16	16.76
Bra022108.1-P	Field mustard	mitochondrion	13.69	15.26
Bra036004.1-P	Field mustard	nucleus	23.23	15.2
Bra033710.1-P	Field mustard	nucleus	22.74	12.4
Bra039210.1-P	Field mustard	plastid	8.8	11.76
Bra001104.1-P	Field mustard	nucleus	20.78	11.24
Bra040197.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	20.78	9.02
Bra032148.1-P	Field mustard	nucleus	24.21	7.25

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.7	Gene3D:2.170.270.10	Gene3D:2.30.280.10	EnsemblPlantsGene:Bra005362	EnsemblPlants:Bra005362.1
EnsemblPlants:Bra005362.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005694	GO:GO:0006139	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008270	GO:GO:0009058	GO:GO:0009719
GO:GO:0009987	GO:GO:0010200	GO:GO:0016043	GO:GO:0016571	GO:GO:0016740	GO:GO:0018024
GO:GO:0019538	GO:GO:0031048	GO:GO:0032259	GO:GO:0034968	GO:GO:0040029	GO:GO:0042054
InterPro:Hist-Lys_N-MeTrfase_plant	InterPro:IPR001214	InterPro:IPR003105	InterPro:IPR003616	InterPro:IPR007728	InterPro:IPR025794
InterPro:IPR036987	UniProt:M4CMC4	PFAM:PF00856	PFAM:PF02182	PFAM:PF05033	PFscan:PS50280
PFscan:PS50867	PFscan:PS50868	PFscan:PS51015	PFscan:PS51575	PANTHER:PTHR22884	PANTHER:PTHR22884:SF458
InterPro:PUA-like_sf	InterPro:Post-SET_dom	InterPro:Pre-SET_dom	InterPro:SET_dom	SMART:SM00317	SMART:SM00466
SMART:SM00468	InterPro:SRA-YDG_sf	InterPro:SRA_YDG	SUPFAM:SSF82199	SUPFAM:SSF88697	UniParc:UPI0002547E5D
SEG:seg	:	:	:	:	:

Description

AT2G35160 (E=1e-166) SUVH5, SGD9 | SUVH5 (SU(VAR)3-9 HOMOLOG 5); histone methyltransferase

Coordinates

chrA05:-:5025635..5026864

Molecular Weight (calculated)

45830.5 Da

IEP (calculated)

7.599

GRAVY (calculated)

-0.493

Length

409 amino acids

Sequence
(BLAST)

001: MRDANKELLA VSIVASGGYD DDLCNSDVLI YTGQGGNLSK KFQQGNITNE PKDQQLLRGN LALANSIDKQ NPVRVIRGNK KTPSSDNNTK NYVYDGLYLV
101: EEFWKEVGSY GKLVFKFRLR RIAGQPELTW KVVKKAKSSK ARDGLCCEDI SGGKERLPIC AVNEIDDEKP PVFDYTVNMI YPDWCQPIPP KGCGCTKGCK
201: DSKNCGCVAK NDGELPYNYD GAIVFRKPMV YECGPLCKCP PDCYLRVTQR GIKIQLEIFK TESRGWGVRS LESIPSGSFI CEYAGELLQE NEADRLAGKD
301: EYLFDIGTDN GSSSFYESSF FTIDAARKGN VGRFINHSCS PNLYAQDVLY HHEDMRIPHV MLFAKDNIPP LKELTYYYNY KIGQVLDADG NVKVKNCYCG
401: SAKCSGRLY

Best Arabidopsis Sequence Match ( AT2G35160.4 )
(BLAST)

001: MVHSESSILS SLRGGDGGGI PCSKDELAIN GSYTDPMGRR KSKRFKVAAE SEFSPDFGSI TRQLRSRRMQ KEFTVETYET RNVSDVCVLS SQADVELIPG
101: EIVAERDSFK SVDCNDMSVG LTEGAESLGV NMQEPMKDRN MPENTSEQNM VEVHPPSISL PEEDMMGSVC RKSITGTKEL HGRTISVGRD LSPNMGSKFS
201: KNGKTAKRSI SVEEENLVLE KSDSGDHLGP SPEVLELEKS EVWIITDKGV VMPSPVKPSE KRNGDYGEGS MRKNSERVAL DKKRLASKFR LSNGGLPSCS
301: SSGDSARYKV KETMRLFHET CKKIMQEEEA RPRKRDGGNF KVVCEASKIL KSKGKNLYSG TQIIGTVPGV EVGDEFQYRM ELNLLGIHRP SQSGIDYMKD
401: DGGELVATSI VSSGGYNDVL DNSDVLIYTG QGGNVGKKKN NEPPKDQQLV TGNLALKNSI NKKNPVRVIR GIKNTTLQSS VVAKNYVYDG LYLVEEYWEE
501: TGSHGKLVFK FKLRRIPGQP ELPWKEVAKS KKSEFRDGLC NVDITEGKET LPICAVNNLD DEKPPPFIYT AKMIYPDWCR PIPPKSCGCT NGCSKSKNCA
601: CIVKNGGKIP YYDGAIVEIK PLVYECGPHC KCPPSCNMRV SQHGIKIKLE IFKTESRGWG VRSLESIPIG SFICEYAGEL LEDKQAESLT GKDEYLFDLG
701: DEDDPFTINA AQKGNIGRFI NHSCSPNLYA QDVLYDHEEI RIPHIMFFAL DNIPPLQELS YDYNYKIDQV YDSNGNIKKK FCYCGSAECS GRLY

Arabidopsis Description

SUVH5Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 [Source:UniProtKB/Swiss-Prot;Acc:O82175]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.