Factsheet for Bra005829.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
ChloroP:	plastid
EpiLoc:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY11319	Canola	nucleus	99.69	99.69
CDX80930	Canola	nucleus	95.97	96.12
Bra009409.1-P	Field mustard	nucleus	83.88	81.35
Bra028776.1-P	Field mustard	nucleus	77.36	78.58
AT5G04940.2	Thale cress	nucleus	81.09	78.06
Bra009408.1-P	Field mustard	nucleus	61.86	77.93
KRH56252	Soybean	nucleus	18.76	56.81
Bra016018.1-P	Field mustard	nucleus	58.29	55.54
VIT_13s0047g00120.t01	Wine grape	nucleus	60.62	54.61
KRH62706	Soybean	nucleus	54.11	52.32
KRH20576	Soybean	nucleus	53.8	51.56
KRH13229	Soybean	nucleus	52.87	50.67
Solyc09g082050.2.1	Tomato	nucleus	48.53	48.38
PGSC0003DMT400077329	Potato	nucleus	49.61	47.69
VIT_08s0040g00360.t01	Wine grape	nucleus	54.11	47.35
KRH66648	Soybean	nucleus	50.85	46.33
PGSC0003DMT400018512	Potato	nucleus	51.16	45.96
Solyc10g077070.1.1	Tomato	nucleus	50.7	45.8
KRG95012	Soybean	plastid	33.33	44.06
GSMUA_Achr5P27620_001	Banana	nucleus	40.47	42.23
Os12t0128450-00	Rice	nucleus	40.0	42.02
EES19725	Sorghum	nucleus	43.88	41.99
Zm00001d010646_P001	Maize	plastid	42.33	41.87
Os05t0490700-01	Rice	extracellular	43.57	41.82
TraesCS1B01G378900.1	Wheat	nucleus	43.57	41.69
TraesCS1D01G366800.1	Wheat	nucleus	43.57	41.57
Zm00001d038541_P002	Maize	nucleus	44.5	41.47
TraesCS1A01G362000.1	Wheat	nucleus	43.26	41.27
Os11t0131600-00	Rice	nucleus	42.48	41.27
TraesCS1D01G307700.1	Wheat	nucleus	42.95	41.1
TraesCS1B01G319000.1	Wheat	nucleus	42.79	40.95
TraesCS1A01G308300.1	Wheat	nucleus	42.64	40.8
TraesCS5A01G140500.1	Wheat	nucleus	42.64	40.32
TraesCS5D01G152000.1	Wheat	nucleus	42.33	39.68
TraesCS4B01G280000.1	Wheat	nucleus	44.34	39.45
EES01635	Sorghum	nucleus	45.12	39.22
Bra005362.1-P	Field mustard	nucleus	24.81	39.12
Zm00001d041005_P001	Maize	nucleus	41.86	38.63
TraesCS5B01G138800.1	Wheat	nucleus	42.33	38.45
Os01t0811300-01	Rice	nucleus, plasma membrane	42.95	37.64
TraesCS3A01G385200.1	Wheat	plastid	42.02	37.33
TraesCS3A01G336100.1	Wheat	nucleus	42.95	37.18
EER96081	Sorghum	nucleus	47.75	37.11
Os11t0602200-01	Rice	nucleus	46.67	37.02
TraesCS3B01G367200.1	Wheat	nucleus	42.64	37.01
TraesCS3B01G366900.1	Wheat	nucleus	42.64	37.01
OQU78645	Sorghum	nucleus	42.79	37.0
TraesCS4D01G278500.1	Wheat	nucleus	46.98	37.0
TraesCS3D01G329100.1	Wheat	nucleus	42.17	36.61
EES10399	Sorghum	nucleus	46.36	36.51
TraesCS4A01G023500.1	Wheat	nucleus	47.13	36.45
Zm00001d043135_P003	Maize	nucleus	43.57	36.07
TraesCS3B01G417400.1	Wheat	nucleus	46.2	35.77
Zm00001d019195_P001	Maize	nucleus	47.44	35.75
Bra022109.1-P	Field mustard	cytosol	13.49	34.8
TraesCS3D01G378200.1	Wheat	plastid	36.28	34.16
Bra007048.1-P	Field mustard	nucleus	30.54	31.22
Bra025949.1-P	Field mustard	nucleus	40.62	29.34
Bra004258.1-P	Field mustard	nucleus	41.4	29.05
Bra021840.1-P	Field mustard	nucleus, plastid	28.68	29.04
Bra005511.1-P	Field mustard	plastid	27.6	29.04
Bra006226.1-P	Field mustard	nucleus	26.82	28.93
Bra024960.1-P	Field mustard	cytosol, mitochondrion, nucleus	13.33	25.9
Bra031976.1-P	Field mustard	nucleus	13.49	25.22
Bra030212.1-P	Field mustard	nucleus	30.39	24.75
Bra024959.1-P	Field mustard	nucleus	13.95	24.32
Bra022108.1-P	Field mustard	mitochondrion	12.87	22.62
Bra036004.1-P	Field mustard	nucleus	14.88	15.36
Bra033710.1-P	Field mustard	nucleus	15.81	13.6
Bra001104.1-P	Field mustard	nucleus	14.88	12.7
Bra039210.1-P	Field mustard	plastid	5.58	11.76
Bra040197.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	15.97	10.93
Bra032148.1-P	Field mustard	nucleus	16.9	7.98
HORVU6Hr1G090170.1	Barley	cytosol	0.16	0.8

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.7	MapMan:12.5.1.16.1	Gene3D:2.170.270.10	Gene3D:2.30.280.10	EnsemblPlantsGene:Bra005829
EnsemblPlants:Bra005829.1	EnsemblPlants:Bra005829.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005694	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008270	GO:GO:0009987	GO:GO:0016043
GO:GO:0016571	GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0032259	GO:GO:0034968
InterPro:Hist-Lys_N-MeTrfase_plant	InterPro:IPR001214	InterPro:IPR003105	InterPro:IPR003616	InterPro:IPR007728	InterPro:IPR025794
InterPro:IPR036987	UniProt:M4CNP1	PFAM:PF00856	PFAM:PF02182	PFAM:PF05033	PFscan:PS50280
PFscan:PS50867	PFscan:PS50868	PFscan:PS51015	PFscan:PS51575	PANTHER:PTHR22884	PANTHER:PTHR22884:SF415
InterPro:PUA-like_sf	InterPro:Post-SET_dom	InterPro:Pre-SET_dom	InterPro:SET_dom	SMART:SM00317	SMART:SM00466
SMART:SM00468	InterPro:SRA-YDG_sf	InterPro:SRA_YDG	SUPFAM:SSF82199	SUPFAM:SSF88697	UniParc:UPI000253FC03
SEG:seg	:	:	:	:	:

Description

AT5G04940 (E=1e-265) SUVH1 | SUVH1 (SU(VAR)3-9 HOMOLOG 1); histone methyltransferase

Coordinates

chrA03:-:823509..825446

Molecular Weight (calculated)

70657.9 Da

IEP (calculated)

8.243

GRAVY (calculated)

-0.439

Length

645 amino acids

Sequence
(BLAST)

001: MEGSFGSYTD KTRVLDIKPL RTLKPVFPSG NQAPPFVCAP PFGPFPPGFT PFYPFSSSQH TPDLNQNNTS EPSLVTPLRT FRSPPPPPPD TATNGDAVEL
101: TVKRKIPRKR TPIAQNPNFS SGITVAEKEN GDRKLVMSVL TRFDALRRRL SQLEDAKESV TGIIKRPDLK AGSTCMSRGV RTNTKKRTGP VPGLEIGDVF
201: FFRFEMCLIG LHSPSMAGID YLVLKGGGEG EEEPIATSIV SSGYYDNDEG NPDVLVYTGQ GGNADKDKQS SDQKLERGNL ALEKSLVRNS PVRVIRGLKE
301: ASQSAKIYIY DGLYDVKESW VEKGKSGHNT FKYKLVRAPG QAPAFASWTE IQKWKKGLPS REGMILTDLT SGVESIGVSL VNEVDGENGP AYFTYSTTVT
401: SFKLTQQPSY GCECGGACKP GNLNCHCIRK NGGDFPYSGN GVLVGRKGMV HECSPACLCP GCKNKVTQMG VKLKLEVFKT VNRGWGLRSW DPIRAGSFIC
501: IYAGEAIDKS QMQPTVANDD YTFDTTRVYT PFKWNYEPGL ADEDGTEEMS EEPELPLPLV ISAKNVGNVA RFMNHSCSPN VFWQPGSYEN NGQLFLQVAF
601: FAISHIPPMT ELTYDYGVTR TSGAQSLCGK KKCFCGSEFC RGSFG

Best Arabidopsis Sequence Match ( AT5G04940.1 )
(BLAST)

001: MERNGGHYTD KTRVLDIKPL RTLRPVFPSG NQAPPFVCAP PFGPFPPGFS SFYPFSSSQA NQHTPDLNQA QYPPQHQQPQ NPPPVYQQQP PQHASEPSLV
101: TPLRSFRSPD VSNGNAELEG STVKRRIPKK RPISRPENMN FESGINVADR ENGNRELVLS VLMRFDALRR RFAQLEDAKE AVSGIIKRPD LKSGSTCMGR
201: GVRTNTKKRP GIVPGVEIGD VFFFRFEMCL VGLHSPSMAG IDYLVVKGET EEEPIATSIV SSGYYDNDEG NPDVLIYTGQ GGNADKDKQS SDQKLERGNL
301: ALEKSLRRDS AVRVIRGLKE ASHNAKIYIY DGLYEIKESW VEKGKSGHNT FKYKLVRAPG QPPAFASWTA IQKWKTGVPS RQGLILPDMT SGVESIPVSL
401: VNEVDTDNGP AYFTYSTTVK YSESFKLMQP SFGCDCANLC KPGNLDCHCI RKNGGDFPYT GNGILVSRKP MIYECSPSCP CSTCKNKVTQ MGVKVRLEVF
501: KTANRGWGLR SWDAIRAGSF ICIYVGEAKD KSKVQQTMAN DDYTFDTTNV YNPFKWNYEP GLADEDACEE MSEESEIPLP LIISAKNVGN VARFMNHSCS
601: PNVFWQPVSY ENNSQLFVHV AFFAISHIPP MTELTYDYGV SRPSGTQNGN PLYGKRKCFC GSAYCRGSFG

Arabidopsis Description

SUVH1Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FF80]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.