Factsheet for Bra006226.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78549	Canola	nucleus	100.0	99.01
CDX70530	Canola	nucleus	96.49	95.69
AT5G13960.1	Thale cress	nucleus	78.26	75.0
VIT_14s0068g01090.t01	Wine grape	nucleus	57.19	65.14
GSMUA_Achr8P00500_001	Banana	extracellular	28.6	62.64
KRG94709	Soybean	nucleus	29.93	59.47
KRH20251	Soybean	nucleus, plastid	56.35	50.91
KRH06819	Soybean	nucleus	61.04	50.69
Solyc02g094520.2.1	Tomato	nucleus	56.69	50.07
Os01t0927000-01	Rice	nucleus	53.85	48.57
Zm00001d042272_P003	Maize	nucleus	53.51	47.62
OQU88147	Sorghum	nucleus	53.51	46.11
TraesCS3D01G433900.1	Wheat	nucleus	52.51	45.51
TraesCS3A01G441200.1	Wheat	nucleus	52.17	45.22
TraesCS3B01G475200.1	Wheat	nucleus	49.33	44.9
Bra005362.1-P	Field mustard	nucleus	29.26	42.79
GSMUA_Achr8P00490_001	Banana	nucleus	25.08	41.44
OQU77925	Sorghum	nucleus	51.84	41.11
HORVU3Hr1G096250.8	Barley	golgi, mitochondrion, nucleus, plastid	52.17	40.73
Zm00001d011956_P002	Maize	mitochondrion, nucleus, plastid	46.99	38.6
TraesCS1D01G241500.1	Wheat	nucleus	50.33	36.75
TraesCS1A01G241600.2	Wheat	nucleus	49.83	36.39
Bra022109.1-P	Field mustard	cytosol	14.21	34.0
Bra009408.1-P	Field mustard	nucleus	28.09	32.81
Bra028776.1-P	Field mustard	nucleus	28.6	26.93
Bra005829.1-P	Field mustard	nucleus	28.93	26.82
Bra007048.1-P	Field mustard	nucleus	27.93	26.47
Bra016018.1-P	Field mustard	nucleus	29.26	25.85
Bra021840.1-P	Field mustard	nucleus, plastid	27.26	25.59
Bra009409.1-P	Field mustard	nucleus	28.43	25.56
Bra031976.1-P	Field mustard	nucleus	14.72	25.51
Bra005511.1-P	Field mustard	plastid	25.59	24.96
Bra030212.1-P	Field mustard	nucleus	31.44	23.74
Bra024960.1-P	Field mustard	cytosol, mitochondrion, nucleus	12.71	22.89
Bra022108.1-P	Field mustard	mitochondrion	13.71	22.34
Bra024959.1-P	Field mustard	nucleus	12.54	20.27
Bra025949.1-P	Field mustard	nucleus	26.76	17.92
Bra004258.1-P	Field mustard	nucleus	25.75	16.76
Bra036004.1-P	Field mustard	nucleus	14.72	14.08
Bra039210.1-P	Field mustard	plastid	6.86	13.4
Bra033710.1-P	Field mustard	nucleus	15.72	12.53
Bra001104.1-P	Field mustard	nucleus	14.72	11.64
Bra040197.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	15.05	9.55
Bra032148.1-P	Field mustard	nucleus	17.89	7.83

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.7	Gene3D:2.30.280.10	EnsemblPlantsGene:Bra006226	EnsemblPlants:Bra006226.1	EnsemblPlants:Bra006226.1-P
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005694	GO:GO:0006139	GO:GO:0006259	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0008168	GO:GO:0008270	GO:GO:0008327	GO:GO:0009987	GO:GO:0010216	GO:GO:0010385
GO:GO:0010428	GO:GO:0010429	GO:GO:0016043	GO:GO:0016571	GO:GO:0016740	GO:GO:0018022
GO:GO:0018024	GO:GO:0019538	GO:GO:0032259	GO:GO:0034968	GO:GO:0046974	GO:GO:0051567
InterPro:Hist-Lys_N-MeTrfase_plant	InterPro:IPR001214	InterPro:IPR003105	InterPro:IPR003616	InterPro:IPR007728	InterPro:IPR025794
InterPro:IPR036987	UniProt:M4CPT7	PFAM:PF00856	PFAM:PF02182	PFAM:PF05033	PFscan:PS50280
PFscan:PS50867	PFscan:PS50868	PFscan:PS51015	PFscan:PS51575	PANTHER:PTHR22884	PANTHER:PTHR22884:SF467
InterPro:PUA-like_sf	InterPro:Post-SET_dom	InterPro:Pre-SET_dom	InterPro:SET_dom	SMART:SM00317	SMART:SM00466
SMART:SM00468	SMART:SM00508	InterPro:SRA-YDG_sf	InterPro:SRA_YDG	SUPFAM:SSF82199	SUPFAM:SSF88697
UniParc:UPI000253FAD2	SEG:seg	:	:	:	:

Description

AT5G13960 (E=1e-230) SUVH4, KYP, SDG33 | SUVH4 (SU(VAR)3-9 HOMOLOG 4); double-stranded methylated DNA binding / histone methyltransferase(H3-K9 specific) / methyl-CpG binding / methyl-CpNpG binding / methyl-CpNpN binding

Coordinates

chrA03:+:2605364..2608831

Molecular Weight (calculated)

67588.0 Da

IEP (calculated)

7.984

GRAVY (calculated)

-0.609

Length

598 amino acids

Sequence
(BLAST)

001: MAGRRKRAKS PEEPKERRLS SRVQELRQKE RDEKEQLARE RVKFLSDQSS ELCDDAKEDD VSTNEGTLIT MRNGNDNNLD FYGSEEDPHL KVRRNLRFFN
101: TQYLLMVQGK MSRPDLKGVM KANAVLYPRK MIGDLPGIDV GHRFFSRAEM VAVGFHSHWL NGIDYMGAAE YQRDYAAYQF PLAVSIVMSG QYEDDLDNAD
201: VVTYTGQGGH NLTGDKRQFK DQELVRGNLG LKNCFEHGVS VRVIRGHNCK SSYSKRVYTY DGLYTVVKYW AEKGVSGFTV YKYQLKRKEG QPELTTNQVN
301: FMYGRIPKST SEIQGLVCED ISNGLESKRI PATNRFTYIN SLKIEPNVKI PKSSAGCNCR GGCTDSKKCA CARLNGGNFP YVDLNDGRLI EPRDVVFECG
401: PNCGCGPECV NRTSQKRLRF HLEVFRSPKK GWAVRSWDFI PAGSPVCEYI GVLRRTDDVD TLTDNDYIFE IDCQQTMQGL DGRQRRLGDV AVPTDNKASE
501: SNGDESVPEF CIDAGSTGNF ARFINHSCEP NLFVQCVLSS HQDIKLARVV LFAADNIPPL QELTYDYGYT LDSVHGPDGK VKKLTCYCGA VNCRKRLY

Best Arabidopsis Sequence Match ( AT5G13960.1 )
(BLAST)

001: MAGKRKRANA PDQTERRSSV RVQKVRQKAL DEKARLVQER VKLLSDRKSE ICVDDTELHE KEEENVDGSP KRRSPPKLTA MQKGKQKLSV SLNGKDVNLE
101: PHLKVTKCLR LFNKQYLLCV QAKLSRPDLK GVTEMIKAKA ILYPRKIIGD LPGIDVGHRF FSRAEMCAVG FHNHWLNGID YMSMEYEKEY SNYKLPLAVS
201: IVMSGQYEDD LDNADTVTYT GQGGHNLTGN KRQIKDQLLE RGNLALKHCC EYNVPVRVTR GHNCKSSYTK RVYTYDGLYK VEKFWAQKGV SGFTVYKYRL
301: KRLEGQPELT TDQVNFVAGR IPTSTSEIEG LVCEDISGGL EFKGIPATNR VDDSPVSPTS GFTYIKSLII EPNVIIPKSS TGCNCRGSCT DSKKCACAKL
401: NGGNFPYVDL NDGRLIESRD VVFECGPHCG CGPKCVNRTS QKRLRFNLEV FRSAKKGWAV RSWEYIPAGS PVCEYIGVVR RTADVDTISD NEYIFEIDCQ
501: QTMQGLGGRQ RRLRDVAVPM NNGVSQSSED ENAPEFCIDA GSTGNFARFI NHSCEPNLFV QCVLSSHQDI RLARVVLFAA DNISPMQELT YDYGYALDSV
601: HGPDGKVKQL ACYCGALNCR KRLY

Arabidopsis Description

SUVH4Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZB6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.