Factsheet for Bra009408.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX98805	Canola	nucleus	94.73	74.05
AT5G04940.2	Thale cress	nucleus	81.84	62.54
Bra005829.1-P	Field mustard	nucleus	77.93	61.86
Bra028776.1-P	Field mustard	nucleus	76.37	61.57
Bra009409.1-P	Field mustard	nucleus	79.49	61.2
KRH56252	Soybean	nucleus	22.85	54.93
Bra016018.1-P	Field mustard	nucleus	60.55	45.79
VIT_13s0047g00120.t01	Wine grape	nucleus	62.7	44.83
KRH62706	Soybean	nucleus	58.4	44.83
KRH20576	Soybean	nucleus	57.42	43.69
KRH13229	Soybean	nucleus	57.23	43.54
Os12t0128450-00	Rice	nucleus	47.85	39.9
VIT_08s0040g00360.t01	Wine grape	nucleus	57.03	39.62
KRH66648	Soybean	nucleus	54.1	39.12
Solyc09g082050.2.1	Tomato	nucleus	49.22	38.95
Bra005362.1-P	Field mustard	nucleus	31.05	38.88
Zm00001d010646_P001	Maize	plastid	49.22	38.65
PGSC0003DMT400077329	Potato	nucleus	49.8	38.0
GSMUA_Achr5P27620_001	Banana	nucleus	45.51	37.7
EES19725	Sorghum	nucleus	49.41	37.54
Os05t0490700-01	Rice	extracellular	49.02	37.35
PGSC0003DMT400018512	Potato	nucleus	51.95	37.05
Solyc10g077070.1.1	Tomato	nucleus	51.56	36.97
TraesCS1B01G378900.1	Wheat	nucleus	48.63	36.94
Os11t0131600-00	Rice	nucleus	47.85	36.9
Zm00001d038541_P002	Maize	nucleus	49.8	36.85
TraesCS1D01G366800.1	Wheat	nucleus	48.63	36.83
TraesCS4B01G280000.1	Wheat	nucleus	52.15	36.83
TraesCS1B01G319000.1	Wheat	nucleus	48.44	36.8
TraesCS1D01G307700.1	Wheat	nucleus	48.24	36.65
TraesCS1A01G362000.1	Wheat	nucleus	48.24	36.54
TraesCS1A01G308300.1	Wheat	nucleus	47.85	36.35
TraesCS5A01G140500.1	Wheat	nucleus	47.66	35.78
TraesCS5D01G152000.1	Wheat	nucleus	47.85	35.61
TraesCS3A01G385200.1	Wheat	plastid	50.2	35.4
TraesCS5B01G138800.1	Wheat	nucleus	47.66	34.37
Zm00001d041005_P001	Maize	nucleus	46.88	34.33
EES01635	Sorghum	nucleus	48.44	33.42
Os01t0811300-01	Rice	nucleus, plasma membrane	47.85	33.29
Os11t0602200-01	Rice	nucleus	52.54	33.09
KRG95012	Soybean	plastid	31.45	32.99
TraesCS3A01G336100.1	Wheat	nucleus	47.66	32.75
TraesCS3B01G367200.1	Wheat	nucleus	47.46	32.71
TraesCS3B01G366900.1	Wheat	nucleus	47.46	32.71
TraesCS4D01G278500.1	Wheat	nucleus	52.15	32.6
OQU78645	Sorghum	nucleus	47.27	32.44
TraesCS3D01G329100.1	Wheat	nucleus	47.07	32.44
EER96081	Sorghum	nucleus	52.34	32.29
EES10399	Sorghum	nucleus	51.37	32.11
TraesCS4A01G023500.1	Wheat	nucleus	52.15	32.01
Bra022109.1-P	Field mustard	cytosol	15.43	31.6
Zm00001d043135_P003	Maize	nucleus	47.85	31.45
Zm00001d019195_P001	Maize	nucleus	52.34	31.31
TraesCS3B01G417400.1	Wheat	nucleus	50.78	31.21
Bra007048.1-P	Field mustard	nucleus	36.72	29.79
TraesCS3D01G378200.1	Wheat	plastid	38.09	28.47
Bra006226.1-P	Field mustard	nucleus	32.81	28.09
Bra005511.1-P	Field mustard	plastid	32.03	26.75
Bra021840.1-P	Field mustard	nucleus, plastid	33.2	26.69
Bra025949.1-P	Field mustard	nucleus	45.31	25.98
Bra004258.1-P	Field mustard	nucleus	45.31	25.24
Bra031976.1-P	Field mustard	nucleus	16.21	24.06
Bra024960.1-P	Field mustard	cytosol, mitochondrion, nucleus	15.43	23.8
Bra030212.1-P	Field mustard	nucleus	35.74	23.11
Bra022108.1-P	Field mustard	mitochondrion	14.84	20.71
Bra024959.1-P	Field mustard	nucleus	14.65	20.27
Bra036004.1-P	Field mustard	nucleus	18.16	14.88
Bra033710.1-P	Field mustard	nucleus	19.92	13.6
Bra001104.1-P	Field mustard	nucleus	18.36	12.43
Bra039210.1-P	Field mustard	plastid	6.84	11.44
Bra040197.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	17.97	9.77
Bra032148.1-P	Field mustard	nucleus	19.92	7.47
HORVU6Hr1G090170.1	Barley	cytosol	0.2	0.8

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.7	MapMan:12.5.1.16.1	Gene3D:2.170.270.10	Gene3D:2.30.280.10	EnsemblPlantsGene:Bra009408
EnsemblPlants:Bra009408.1	EnsemblPlants:Bra009408.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005694	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008270	GO:GO:0009987	GO:GO:0016043
GO:GO:0016571	GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0032259	GO:GO:0034968
InterPro:Hist-Lys_N-MeTrfase_plant	InterPro:IPR001214	InterPro:IPR003105	InterPro:IPR003616	InterPro:IPR007728	InterPro:IPR025794
InterPro:IPR036987	UniProt:M4CYW1	PFAM:PF00856	PFAM:PF02182	PFAM:PF05033	PFscan:PS50280
PFscan:PS50867	PFscan:PS50868	PFscan:PS51015	PFscan:PS51575	PANTHER:PTHR22884	PANTHER:PTHR22884:SF415
InterPro:PUA-like_sf	InterPro:Post-SET_dom	InterPro:Pre-SET_dom	InterPro:SET_dom	SMART:SM00317	SMART:SM00466
SMART:SM00468	InterPro:SRA-YDG_sf	InterPro:SRA_YDG	SUPFAM:SSF82199	SUPFAM:SSF88697	UniParc:UPI0002547779
SEG:seg	:	:	:	:	:

Description

AT5G04940 (E=9e-244) SUVH1 | SUVH1 (SU(VAR)3-9 HOMOLOG 1); histone methyltransferase

Coordinates

chrA10:+:16515257..16516795

Molecular Weight (calculated)

56925.7 Da

IEP (calculated)

8.115

GRAVY (calculated)

-0.413

Length

512 amino acids

Sequence
(BLAST)

001: MRFDALRRRL AQLEDAENAV NGIIKRPDLK AGSTCMSRGV RTNTKKRPGL VPGVEIGDIF FFRFEMCLVG LHSPSMAGID YLVIKGGDAE EEEPIATSIV
101: SSAYTENDRV NPDVLVYTGQ GGHADKDKEA SDQKLERGNL ALEKSLHRNN AVRVIRGLNL KEATHRVKIY VYDGIYEIKE AWIEKGKSGH DTFKYKLVRA
201: PNQPPGFATW TEIQSWKTGK SPRRGLILPD LTSGVESVAV SLVNEVDSEN GPSYFTYSTT VKYSMSFQLT QPSSGCGCGN KCKPGNLECP CIRKNGGEFP
301: YTGNDILVSR RPMVYECSPS CPCLTCKSKV TQMGVKLRLE VFKTVDRGWG LRSWDPIRAG AFICVYAGEA RDKSKVQQTM ANDDFTFDTT RVYTPFKWNY
401: EAGLADEDAS EEVSEEPILP LPLIISAKNI GNVARFMNHS CSPNVFWQPV SYENNGQLYL HVAFFAISHI PPMTELTYDY GVSRPTGAQN GNPVYGKKRC
501: FCGTQYCRGS FG

Best Arabidopsis Sequence Match ( AT5G04940.1 )
(BLAST)

001: MERNGGHYTD KTRVLDIKPL RTLRPVFPSG NQAPPFVCAP PFGPFPPGFS SFYPFSSSQA NQHTPDLNQA QYPPQHQQPQ NPPPVYQQQP PQHASEPSLV
101: TPLRSFRSPD VSNGNAELEG STVKRRIPKK RPISRPENMN FESGINVADR ENGNRELVLS VLMRFDALRR RFAQLEDAKE AVSGIIKRPD LKSGSTCMGR
201: GVRTNTKKRP GIVPGVEIGD VFFFRFEMCL VGLHSPSMAG IDYLVVKGET EEEPIATSIV SSGYYDNDEG NPDVLIYTGQ GGNADKDKQS SDQKLERGNL
301: ALEKSLRRDS AVRVIRGLKE ASHNAKIYIY DGLYEIKESW VEKGKSGHNT FKYKLVRAPG QPPAFASWTA IQKWKTGVPS RQGLILPDMT SGVESIPVSL
401: VNEVDTDNGP AYFTYSTTVK YSESFKLMQP SFGCDCANLC KPGNLDCHCI RKNGGDFPYT GNGILVSRKP MIYECSPSCP CSTCKNKVTQ MGVKVRLEVF
501: KTANRGWGLR SWDAIRAGSF ICIYVGEAKD KSKVQQTMAN DDYTFDTTNV YNPFKWNYEP GLADEDACEE MSEESEIPLP LIISAKNVGN VARFMNHSCS
601: PNVFWQPVSY ENNSQLFVHV AFFAISHIPP MTELTYDYGV SRPSGTQNGN PLYGKRKCFC GSAYCRGSFG

Arabidopsis Description

SUVH1Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FF80]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.