Factsheet for Bra009409.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
ChloroP:	plastid
EpiLoc:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX98804	Canola	nucleus	84.96	92.17
Bra005829.1-P	Field mustard	nucleus	81.35	83.88
AT5G04940.2	Thale cress	nucleus	82.56	81.94
Bra028776.1-P	Field mustard	nucleus	76.99	80.63
Bra009408.1-P	Field mustard	nucleus	61.2	79.49
CDX70182	Canola	nucleus	99.25	65.22
Bra016018.1-P	Field mustard	nucleus	58.05	57.02
VIT_13s0047g00120.t01	Wine grape	nucleus	59.25	55.03
KRH56252	Soybean	nucleus	17.44	54.46
KRH62706	Soybean	nucleus	52.48	52.32
KRH20576	Soybean	nucleus	51.13	50.52
KRH13229	Soybean	nucleus	50.68	50.07
Solyc09g082050.2.1	Tomato	nucleus	46.17	47.45
VIT_08s0040g00360.t01	Wine grape	nucleus	51.88	46.81
PGSC0003DMT400077329	Potato	nucleus	46.92	46.5
PGSC0003DMT400018512	Potato	nucleus	49.62	45.96
Solyc10g077070.1.1	Tomato	nucleus	49.17	45.8
KRH66648	Soybean	nucleus	48.57	45.62
KRG95012	Soybean	plastid	32.33	44.06
GSMUA_Achr5P27620_001	Banana	nucleus	39.55	42.56
Os12t0128450-00	Rice	nucleus	38.5	41.69
EES19725	Sorghum	nucleus	42.26	41.69
Zm00001d010646_P001	Maize	plastid	40.6	41.41
Os11t0131600-00	Rice	nucleus	41.2	41.27
TraesCS1B01G378900.1	Wheat	nucleus	41.5	40.95
TraesCS1D01G366800.1	Wheat	nucleus	41.5	40.83
Os05t0490700-01	Rice	extracellular	41.2	40.77
TraesCS1A01G362000.1	Wheat	nucleus	41.35	40.68
Zm00001d038541_P002	Maize	nucleus	42.26	40.61
TraesCS1D01G307700.1	Wheat	nucleus	40.75	40.21
TraesCS1A01G308300.1	Wheat	nucleus	40.6	40.06
TraesCS1B01G319000.1	Wheat	nucleus	40.6	40.06
TraesCS5A01G140500.1	Wheat	nucleus	40.75	39.74
TraesCS5D01G152000.1	Wheat	nucleus	40.9	39.53
TraesCS4B01G280000.1	Wheat	nucleus	42.71	39.17
Bra005362.1-P	Field mustard	nucleus	24.06	39.12
Zm00001d041005_P001	Maize	nucleus	40.3	38.34
TraesCS5B01G138800.1	Wheat	nucleus	40.9	38.31
EES01635	Sorghum	nucleus	42.26	37.87
TraesCS3A01G336100.1	Wheat	nucleus	42.41	37.85
Os01t0811300-01	Rice	nucleus, plasma membrane	41.8	37.77
TraesCS3A01G385200.1	Wheat	plastid	41.05	37.6
TraesCS3B01G367200.1	Wheat	nucleus	41.95	37.55
TraesCS3B01G366900.1	Wheat	nucleus	41.95	37.55
TraesCS3D01G329100.1	Wheat	nucleus	41.65	37.28
OQU78645	Sorghum	nucleus	41.35	36.86
Os11t0602200-01	Rice	nucleus	44.96	36.78
TraesCS4D01G278500.1	Wheat	nucleus	45.11	36.63
EER96081	Sorghum	nucleus	45.41	36.39
TraesCS4A01G023500.1	Wheat	nucleus	45.41	36.21
EES10399	Sorghum	nucleus	44.06	35.78
TraesCS3B01G417400.1	Wheat	nucleus	44.51	35.53
Zm00001d043135_P003	Maize	nucleus	41.5	35.43
Zm00001d019195_P001	Maize	nucleus	45.26	35.16
TraesCS3D01G378200.1	Wheat	plastid	35.79	34.74
Bra022109.1-P	Field mustard	cytosol	12.63	33.6
Bra007048.1-P	Field mustard	nucleus	30.53	32.17
Bra005511.1-P	Field mustard	plastid	27.52	29.85
Bra021840.1-P	Field mustard	nucleus, plastid	28.57	29.83
Bra004258.1-P	Field mustard	nucleus	39.7	28.73
Bra025949.1-P	Field mustard	nucleus	38.35	28.56
Bra006226.1-P	Field mustard	nucleus	25.56	28.43
Bra024960.1-P	Field mustard	cytosol, mitochondrion, nucleus	13.08	26.2
Bra030212.1-P	Field mustard	nucleus	30.53	25.63
Bra031976.1-P	Field mustard	nucleus	12.48	24.06
Bra022108.1-P	Field mustard	mitochondrion	12.93	23.43
Bra024959.1-P	Field mustard	nucleus	12.78	22.97
Bra036004.1-P	Field mustard	nucleus	13.23	14.08
Bra033710.1-P	Field mustard	nucleus	14.59	12.93
Bra001104.1-P	Field mustard	nucleus	13.68	12.04
Bra039210.1-P	Field mustard	plastid	5.11	11.11
Bra040197.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	14.14	9.98
Bra032148.1-P	Field mustard	nucleus	16.39	7.98
HORVU6Hr1G090170.1	Barley	cytosol	0.15	0.8

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.7	MapMan:12.5.1.16.1	Gene3D:2.170.270.10	Gene3D:2.30.280.10	EnsemblPlantsGene:Bra009409
EnsemblPlants:Bra009409.1	EnsemblPlants:Bra009409.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005694	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009987	GO:GO:0016043	GO:GO:0016571
GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0034968	InterPro:Hist-Lys_N-MeTrfase_plant	InterPro:IPR001214
InterPro:IPR003105	InterPro:IPR007728	InterPro:IPR025794	InterPro:IPR036987	UniProt:M4CYW2	PFAM:PF00856
PFAM:PF02182	PFAM:PF05033	PFscan:PS50280	PFscan:PS50867	PFscan:PS51015	PFscan:PS51575
PANTHER:PTHR22884	PANTHER:PTHR22884:SF415	InterPro:PUA-like_sf	InterPro:Pre-SET_dom	InterPro:SET_dom	SMART:SM00317
SMART:SM00466	SMART:SM00468	InterPro:SRA-YDG_sf	InterPro:SRA_YDG	SUPFAM:SSF82199	SUPFAM:SSF88697
UniParc:UPI000254777A	SEG:seg	:	:	:	:

Description

AT5G04940 (E=1e-273) SUVH1 | SUVH1 (SU(VAR)3-9 HOMOLOG 1); histone methyltransferase

Coordinates

chrA10:+:16517932..16520195

Molecular Weight (calculated)

73060.6 Da

IEP (calculated)

7.973

GRAVY (calculated)

-0.419

Length

665 amino acids

Sequence
(BLAST)

001: MEGNFGSYTD KTRVLDIKPL RTLRPVFPSG NQAPPFVCAP PFGPFPPGFS PFYPFSSSQH TPDLNQAQNP PQHQPHNSSE PSLVTPLRTF RSPPDTTTSN
101: GDVEPSTVKR KITKKRTPLV CPENFSSGIS VADRENGNRK LVTSVIMRFD ALRRRFSQLE DAKEAVSGSI KRGDLKAGST CMSRGVRTNT KKRPGVVPGV
201: EIGDVFFFRF EMCLVGLHSP SMAGIDYLLV KGGGETGEEP IATSIVSSGY YDNDEGNPDV LVYTGQGGGN ADKEKQTSDQ KLERGNLALE KSLLRNSPVR
301: VIRGLKEASQ SAKIYVYDGL YEIKESWVEK GKLGHNTFKY KLVRAPGQPP AFASWIAIQK WKAGLPSREG LILPDLTSGV ESIGVSLVND VDAENGPPYF
401: TYSTTVNYSE SFKLSQPSSG CHCSNACKPG NLDCHCIRKN GGDFPYCGNG VLVSRKSMVY ECSPSCPCSA CKNKVTQMGV KVKLEVFKTV NRGWGLRSWD
501: PIRAGSFICI YAGEAKDKSK VQQTMADDDY TFDTTRVYTP FKWNYELGLA DEDASEEMSE EPELPLPLVI SAKNAGNVAR FMNHSCSPNV FWQPVSYEHN
601: GQLYLQVAFF AMSHIPPMTE LTYDYGVTRP SGAQNGNTLY GIRPLSISQI VEDVLSCLSP VGYVM

Best Arabidopsis Sequence Match ( AT5G04940.1 )
(BLAST)

001: MERNGGHYTD KTRVLDIKPL RTLRPVFPSG NQAPPFVCAP PFGPFPPGFS SFYPFSSSQA NQHTPDLNQA QYPPQHQQPQ NPPPVYQQQP PQHASEPSLV
101: TPLRSFRSPD VSNGNAELEG STVKRRIPKK RPISRPENMN FESGINVADR ENGNRELVLS VLMRFDALRR RFAQLEDAKE AVSGIIKRPD LKSGSTCMGR
201: GVRTNTKKRP GIVPGVEIGD VFFFRFEMCL VGLHSPSMAG IDYLVVKGET EEEPIATSIV SSGYYDNDEG NPDVLIYTGQ GGNADKDKQS SDQKLERGNL
301: ALEKSLRRDS AVRVIRGLKE ASHNAKIYIY DGLYEIKESW VEKGKSGHNT FKYKLVRAPG QPPAFASWTA IQKWKTGVPS RQGLILPDMT SGVESIPVSL
401: VNEVDTDNGP AYFTYSTTVK YSESFKLMQP SFGCDCANLC KPGNLDCHCI RKNGGDFPYT GNGILVSRKP MIYECSPSCP CSTCKNKVTQ MGVKVRLEVF
501: KTANRGWGLR SWDAIRAGSF ICIYVGEAKD KSKVQQTMAN DDYTFDTTNV YNPFKWNYEP GLADEDACEE MSEESEIPLP LIISAKNVGN VARFMNHSCS
601: PNVFWQPVSY ENNSQLFVHV AFFAISHIPP MTELTYDYGV SRPSGTQNGN PLYGKRKCFC GSAYCRGSFG

Arabidopsis Description

SUVH1Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FF80]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.