Factsheet for Bra016018.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra009389.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G73100.1	Bra009389.1-P	AT5G09540.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96449	Canola	nucleus	96.31	99.24
CDY59935	Canola	nucleus	93.06	95.6
AT1G73100.1	Thale cress	nucleus	80.35	81.32
Bra009408.1-P	Field mustard	nucleus	45.79	60.55
Bra028776.1-P	Field mustard	nucleus	55.24	58.9
Bra005829.1-P	Field mustard	nucleus	55.54	58.29
Bra009409.1-P	Field mustard	nucleus	57.02	58.05
KRH56252	Soybean	nucleus	16.84	53.52
VIT_13s0047g00120.t01	Wine grape	nucleus	55.39	52.37
KRH13229	Soybean	nucleus	49.78	50.07
KRH62706	Soybean	nucleus	49.19	49.92
KRH20576	Soybean	nucleus	49.48	49.78
Solyc09g082050.2.1	Tomato	nucleus	46.09	48.22
PGSC0003DMT400077329	Potato	nucleus	46.38	46.8
Solyc10g077070.1.1	Tomato	nucleus	48.6	46.08
KRH66648	Soybean	nucleus	48.15	46.05
PGSC0003DMT400018512	Potato	nucleus	48.3	45.54
VIT_08s0040g00360.t01	Wine grape	nucleus	49.48	45.45
KRG95012	Soybean	plastid	30.58	42.42
GSMUA_Achr5P27620_001	Banana	nucleus	38.55	42.23
Os12t0128450-00	Rice	nucleus	37.96	41.86
Os11t0131600-00	Rice	nucleus	40.47	41.27
Zm00001d010646_P001	Maize	plastid	39.73	41.26
EES19725	Sorghum	nucleus	41.06	41.25
TraesCS4B01G280000.1	Wheat	nucleus	43.72	40.83
TraesCS1A01G362000.1	Wheat	nucleus	40.33	40.38
TraesCS1B01G378900.1	Wheat	nucleus	40.18	40.36
Os05t0490700-01	Rice	extracellular	40.03	40.33
TraesCS1D01G366800.1	Wheat	nucleus	40.18	40.24
Zm00001d038541_P002	Maize	nucleus	40.92	40.03
TraesCS1D01G307700.1	Wheat	nucleus	39.59	39.76
TraesCS1B01G319000.1	Wheat	nucleus	39.29	39.47
Bra005362.1-P	Field mustard	nucleus	23.78	39.36
TraesCS1A01G308300.1	Wheat	nucleus	39.0	39.17
TraesCS5A01G140500.1	Wheat	nucleus	39.44	39.15
TraesCS5D01G152000.1	Wheat	nucleus	39.73	39.1
TraesCS5B01G138800.1	Wheat	nucleus	40.33	38.45
TraesCS4D01G278500.1	Wheat	nucleus	45.64	37.73
TraesCS3A01G385200.1	Wheat	plastid	40.03	37.33
Os11t0602200-01	Rice	nucleus	44.46	37.02
TraesCS3B01G366900.1	Wheat	nucleus	40.62	37.01
TraesCS3B01G367200.1	Wheat	nucleus	40.62	37.01
Os01t0811300-01	Rice	nucleus, plasma membrane	40.18	36.96
TraesCS4A01G023500.1	Wheat	nucleus	45.49	36.93
TraesCS3A01G336100.1	Wheat	nucleus	40.47	36.78
EES01635	Sorghum	nucleus	40.18	36.66
TraesCS3D01G329100.1	Wheat	nucleus	40.18	36.61
EER96081	Sorghum	nucleus	44.76	36.51
Zm00001d041005_P001	Maize	nucleus	37.37	36.19
OQU78645	Sorghum	nucleus	39.88	36.19
EES10399	Sorghum	nucleus	43.43	35.9
TraesCS3B01G417400.1	Wheat	nucleus	43.13	35.05
Zm00001d019195_P001	Maize	nucleus	44.31	35.05
Zm00001d043135_P003	Maize	nucleus	39.14	34.02
TraesCS3D01G378200.1	Wheat	plastid	34.27	33.87
Bra022109.1-P	Field mustard	cytosol	12.41	33.6
Bra004258.1-P	Field mustard	nucleus	44.76	32.97
Bra025949.1-P	Field mustard	nucleus	42.84	32.47
Bra007048.1-P	Field mustard	nucleus	27.92	29.95
Bra005511.1-P	Field mustard	plastid	26.88	29.69
Bra006226.1-P	Field mustard	nucleus	25.85	29.26
Bra021840.1-P	Field mustard	nucleus, plastid	27.47	29.2
Bra031976.1-P	Field mustard	nucleus	13.44	26.38
Bra024960.1-P	Field mustard	cytosol, mitochondrion, nucleus	12.56	25.6
Bra030212.1-P	Field mustard	nucleus	29.69	25.38
Bra024959.1-P	Field mustard	nucleus	13.44	24.59
Bra022108.1-P	Field mustard	mitochondrion	12.56	23.16
Bra036004.1-P	Field mustard	nucleus	14.48	15.68
Bra033710.1-P	Field mustard	nucleus	14.77	13.33
Bra001104.1-P	Field mustard	nucleus	14.77	13.23
Bra040197.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	15.51	11.15
Bra039210.1-P	Field mustard	plastid	5.02	11.11
Bra032148.1-P	Field mustard	nucleus	18.32	9.08
HORVU6Hr1G090170.1	Barley	cytosol	0.15	0.8

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.7	MapMan:12.5.1.16.1	Gene3D:2.170.270.10	Gene3D:2.30.280.10	EnsemblPlantsGene:Bra016018
EnsemblPlants:Bra016018.1	EnsemblPlants:Bra016018.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005694	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008270	GO:GO:0009987	GO:GO:0016043
GO:GO:0016571	GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0032259	GO:GO:0034968
InterPro:Hist-Lys_N-MeTrfase_plant	InterPro:IPR001214	InterPro:IPR003105	InterPro:IPR003616	InterPro:IPR007728	InterPro:IPR025794
InterPro:IPR036987	UniProt:M4DHP1	PFAM:PF00856	PFAM:PF02182	PFAM:PF05033	PFscan:PS50280
PFscan:PS50867	PFscan:PS50868	PFscan:PS51015	PFscan:PS51575	PANTHER:PTHR22884	PANTHER:PTHR22884:SF415
InterPro:PUA-like_sf	InterPro:Post-SET_dom	InterPro:Pre-SET_dom	InterPro:SET_dom	SMART:SM00317	SMART:SM00466
SMART:SM00468	InterPro:SRA-YDG_sf	InterPro:SRA_YDG	SUPFAM:SSF82199	SUPFAM:SSF88697	UniParc:UPI0002541CBB
SEG:seg	:	:	:	:	:

Description

AT1G73100 (E=1e-288) SUVH3, SDG19 | SUVH3 (SU(VAR)3-9 HOMOLOG 3); histone methyltransferase

Coordinates

chrA07:+:19820309..19822342

Molecular Weight (calculated)

73401.1 Da

IEP (calculated)

8.536

GRAVY (calculated)

-0.445

Length

677 amino acids

Sequence
(BLAST)

001: MEGVPGINTV PNPNYYDKSI VLDVKPLRSL KPVFPNGNQG PPFVGCPPFG PPSSSSGPSP FYPFGSQQPP DLNQTQDTPP PTFVTPLQSY RPPTEVSNGP
101: SSSSGTKKGV GRPKRNAVSI APSSSSSGTK RGAGRPKGTG NAKKKEKTSL DVVQVVKRDF DSGISAPERE DGNTDLVSSV LMRFDAVRRR LSQVEHGKAG
201: TSKAAGVLMS NGVRTNMKKR VGTVPGIEVG DIFFSRIEMC LVGLHMQTMA GIDYITSKVG ADEEPLATSI VSSGRYDGEA QDPESLIYSG QGGNADKSGQ
301: ASDQKLERGN LALEKSLRKG NGVRVIRGEE DPASKTGKIY IYDGVYTISE SWVEKGKNGC NTFKYKLVRV PNQPPAFGVW KAVHKWKEGL TPRANLILPD
401: ITSGVESKPV SLVNDVDGEK GPSYFTYIST LKPSKQTQPP TIGCSCHGSC AAGNLDCSCV RKNGGDLPYL NGVMLVSRRP MVYECGTTCP CHASCKNKVI
501: QTGLKFRMEV FKTDHRGWGL RSWDPIRAGS FICEYAGEVL LRMEQEDDEF VFDTSRVYNS FKWNYEPALV DEDPSDEVPE EFNLPSPVLI SAKSFGNVAR
601: FMNHSCSPNV MWQPVFVEGS GESVVHIAFF AIRHIPPMAE LTYDYGVSLA SEARDGSLLH GKRKCLCGSV KCRGSFG

Best Arabidopsis Sequence Match ( AT1G73100.1 )
(BLAST)

001: MQGVPGFNTV PNPNHYDKSI VLDIKPLRSL KPVFPNGNQG PPFVGCPPFG PSSSEYSSFF PFGAQQPTHD TPDLNQTQNT PIPSFVPPLR SYRTPTKTNG
101: PSSSSGTKRG VGRPKGTTSV KKKEKKTVAN EPNLDVQVVK KFSSDFDSGI SAAEREDGNA YLVSSVLMRF DAVRRRLSQV EFTKSATSKA AGTLMSNGVR
201: TNMKKRVGTV PGIEVGDIFF SRIEMCLVGL HMQTMAGIDY IISKAGSDEE SLATSIVSSG RYEGEAQDPE SLIYSGQGGN ADKNRQASDQ KLERGNLALE
301: NSLRKGNGVR VVRGEEDAAS KTGKIYIYDG LYSISESWVE KGKSGCNTFK YKLVRQPGQP PAFGFWKSVQ KWKEGLTTRP GLILPDLTSG AESKPVSLVN
401: DVDEDKGPAY FTYTSSLKYS ETFKLTQPVI GCSCSGSCSP GNHNCSCIRK NDGDLPYLNG VILVSRRPVI YECGPTCPCH ASCKNRVIQT GLKSRLEVFK
501: TRNRGWGLRS WDSLRAGSFI CEYAGEVKDN GNLRGNQEED AYVFDTSRVF NSFKWNYEPE LVDEDPSTEV PEEFNLPSPL LISAKKFGNV ARFMNHSCSP
601: NVFWQPVIRE GNGESVIHIA FFAMRHIPPM AELTYDYGIS PTSEARDESL LHGQRTCLCG SEQCRGSFG

Arabidopsis Description

SUVH3Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5P4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.