Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY46062 | Canola | cytosol | 100.0 | 100.0 |
| CDX72637 | Canola | cytosol | 100.0 | 100.0 |
| Bra003850.1-P | Field mustard | extracellular | 24.0 | 5.94 |
| Bra016007.1-P | Field mustard | extracellular | 24.0 | 5.94 |
| AT1G73260.1 | Thale cress | extracellular, vacuole | 24.0 | 5.58 |
| Bra016003.1-P | Field mustard | extracellular | 22.0 | 5.19 |
| Bra008085.1-P | Field mustard | extracellular | 18.0 | 5.08 |
| Bra008089.1-P | Field mustard | extracellular, plasma membrane, vacuole | 20.0 | 4.9 |
| Bra016005.1-P | Field mustard | extracellular | 20.0 | 4.78 |
| Bra016004.1-P | Field mustard | plasma membrane, vacuole | 20.0 | 4.74 |
| Bra008094.1-P | Field mustard | extracellular | 20.0 | 4.72 |
| Bra008088.1-P | Field mustard | extracellular | 20.0 | 4.69 |
| Bra008083.1-P | Field mustard | extracellular | 20.0 | 4.65 |
| Bra016006.1-P | Field mustard | extracellular | 16.0 | 3.83 |
| Bra016002.1-P | Field mustard | extracellular | 16.0 | 3.74 |
| Bra000137.1-P | Field mustard | extracellular | 16.0 | 3.72 |
| Bra008084.1-P | Field mustard | extracellular | 14.0 | 3.38 |
| Bra027832.1-P | Field mustard | extracellular, vacuole | 16.0 | 3.23 |
| Bra008090.1-P | Field mustard | extracellular, vacuole | 2.0 | 0.96 |
Protein Annotations
| EnsemblPlants:Bra017833.1 | EnsemblPlants:Bra017833.1-P | EnsemblPlantsGene:Bra017833 | Gene3D:4.10.1110.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0008270 | GO:GO:0046872 | InterPro:AN1-like_Znf | InterPro:IPR000058 | InterPro:IPR035896 | InterPro:Znf_AN1 |
| PANTHER:PTHR10634 | PANTHER:PTHR10634:SF38 | PFAM:PF01428 | PFscan:PS51039 | SUPFAM:SSF118310 | UniParc:UPI0002540D4D |
| UniProt:M4DMU7 | MapMan:35.1 | : | : | : | : |
Description
AT4G12040 (E=3e-020) | zinc finger (AN1-like) family protein
Coordinates
chrA03:-:30798442..30798594
Molecular Weight (calculated)
5800.0 Da
IEP (calculated)
8.800
GRAVY (calculated)
-0.656
Length
50 amino acids
Sequence
(BLAST)
(BLAST)
1: MGFKCKCGST FCRSHRCPEK HECSFNFKEV GRDVIAKANH VIKEDKVERI
001: MGSEENNSTS FPPTEPKLCD NGCGFFGSPS NMNLCSKCYR SLRAEEDQTA VAKAAVKNSL KLPSCSIIAP GQKHPLEIKP AHLETVVVTA EPSSVPVAAE
101: QDEAEPSRPV RPNNRCFSCN KKVGVMGFKC KCGSTFCGSH RYPEKHECSF DFKEVGRDAI AKANPLVKAD KVQRI
101: QDEAEPSRPV RPNNRCFSCN KKVGVMGFKC KCGSTFCGSH RYPEKHECSF DFKEVGRDAI AKANPLVKAD KVQRI
Arabidopsis Description
SAP7SAP7 [Source:UniProtKB/TrEMBL;Acc:A0A178V0G6]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.