Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY33909 | Canola | plasma membrane | 93.59 | 90.0 |
| CDY05626 | Canola | cytosol | 36.76 | 62.55 |
| Bra020631.1-P | Field mustard | cytosol | 18.86 | 50.49 |
| Bra030665.1-P | Field mustard | cytosol | 25.03 | 21.21 |
| Bra015536.1-P | Field mustard | cytosol | 25.63 | 20.8 |
| Bra014622.1-P | Field mustard | cytosol | 21.64 | 18.38 |
| Bra007329.1-P | Field mustard | cytosol | 20.56 | 17.69 |
| Bra004649.1-P | Field mustard | cytosol | 19.71 | 16.8 |
| Bra031544.1-P | Field mustard | nucleus | 2.54 | 6.05 |
Protein Annotations
| MapMan:19.4.5.4.2 | Gene3D:3.30.830.10 | EnsemblPlantsGene:Bra020643 | EnsemblPlants:Bra020643.1 | EnsemblPlants:Bra020643.1-P | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004222 | GO:GO:0005488 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016787 | GO:GO:0019538 | GO:GO:0046872 | UniProt:M4DVU9 | InterPro:Metalloenz_LuxS/M16 | PFAM:PF00675 |
| PFAM:PF05193 | PFAM:PF16187 | ScanProsite:PS00143 | PANTHER:PTHR43690 | PANTHER:PTHR43690:SF1 | InterPro:Pept_M16_N |
| InterPro:Pept_M16_Zn_BS | InterPro:Peptidase_M16_C | InterPro:Peptidase_M16_M | SUPFAM:SSF63411 | UniParc:UPI00025466F1 | SEG:seg |
Description
AT1G06900 (E=9e-092) | catalytic/ metal ion binding / metalloendopeptidase/ zinc ion binding
Coordinates
chrA02:-:23992174..23999041
Molecular Weight (calculated)
95950.3 Da
IEP (calculated)
5.511
GRAVY (calculated)
-0.355
Length
827 amino acids
Sequence
(BLAST)
(BLAST)
001: MVMGHRIFLV KPKDLIKEKE STGLLDSVKR FLHSAFCPSI DLHSMGFLYK LRFLRKRKYQ EFEQNNWMDY PPDDYYEDLQ DHYDDSDSDY YDAQLVQYDD
101: EEDGNHDEDN DEENDAYIIR PDKSQKVYKS IVLRNGLTVL LISDSSAMSS TAAMTVRFGS INDPPDMMGI AHLIEHMLSR GSTENDFQSF VMMNGERVFA
201: ITDMEHSGFS FEIGTPNFQA GLKRFAKSFI SPPMDVEDIK SEINTINQEW LGWKFRDEAR LEQLFAHTTH VDHPFHRFTM GNKRSLSNHE PKSIRDAALE
301: LYVKHFVASC MKLVVIGADP VDKLERWVRK YFSELPRGQE INLAFPEYDT HRWKHSLWKH GVSYFLESLE GSQSMKISWI LPPVSRTHVN KRPEMFILRL
401: LCDESQGSLS SFFKSKLWIT SLHVWSGHES KFSDVDSSSY CSTLAGQLFV ISMDITDRGW EHKYDMVSYV YQYLNLLKSM DPPPSLPSLI EEFRSSMNMR
501: FQCLDFDSNQ LCDPSQFSLA LAVNMLKFPV SHAISLDFGY DFGDFEDIKE MLRNFSTKNM RIDFLSKAFT EKGEREPFFS FTFKEENVPH SYLQRWEIPE
601: ETDPGLHLPF RNELMPTTSL LEVLEEEIVG SSFKSIADKC FYKENKGVLG KASLNIYLDP GQGVIPHMIT RIYFEIIKVE LSSLLFKAGE GYISTALSIG
701: DDNTIVLELY GHPQRFKYLV ASIWDKFKSF EPTPDCFQII TERMKRDFYV NSRDLIHHAH CLLSEAVFLV PFTMEDKYGV MKYITFDNLR RLLPAMRSEA
801: RVVAVFSGSV SKEDCKQITN LFQPFGV
101: EEDGNHDEDN DEENDAYIIR PDKSQKVYKS IVLRNGLTVL LISDSSAMSS TAAMTVRFGS INDPPDMMGI AHLIEHMLSR GSTENDFQSF VMMNGERVFA
201: ITDMEHSGFS FEIGTPNFQA GLKRFAKSFI SPPMDVEDIK SEINTINQEW LGWKFRDEAR LEQLFAHTTH VDHPFHRFTM GNKRSLSNHE PKSIRDAALE
301: LYVKHFVASC MKLVVIGADP VDKLERWVRK YFSELPRGQE INLAFPEYDT HRWKHSLWKH GVSYFLESLE GSQSMKISWI LPPVSRTHVN KRPEMFILRL
401: LCDESQGSLS SFFKSKLWIT SLHVWSGHES KFSDVDSSSY CSTLAGQLFV ISMDITDRGW EHKYDMVSYV YQYLNLLKSM DPPPSLPSLI EEFRSSMNMR
501: FQCLDFDSNQ LCDPSQFSLA LAVNMLKFPV SHAISLDFGY DFGDFEDIKE MLRNFSTKNM RIDFLSKAFT EKGEREPFFS FTFKEENVPH SYLQRWEIPE
601: ETDPGLHLPF RNELMPTTSL LEVLEEEIVG SSFKSIADKC FYKENKGVLG KASLNIYLDP GQGVIPHMIT RIYFEIIKVE LSSLLFKAGE GYISTALSIG
701: DDNTIVLELY GHPQRFKYLV ASIWDKFKSF EPTPDCFQII TERMKRDFYV NSRDLIHHAH CLLSEAVFLV PFTMEDKYGV MKYITFDNLR RLLPAMRSEA
801: RVVAVFSGSV SKEDCKQITN LFQPFGV
0001: MSSMKSVSAL DNVVVKSPND RRLYRVIELE NGLCALLIHD PDIYPEGSVP DQIDEDDEDG EEEDSDGSSE DDDDDEDDEE DGEGDEEDED EDEDEVKGKG
0101: DHQTKKAAAA MCVSMGSFLD PPEAQGLAHF LEHMLFMGST EFPDENEYDS YLSKHGGSSN AYTEMEHTCY HFEVKREFLQ GALKRFSQFF VAPLMKTEAM
0201: EREVLAVDSE FNQALQNDAC RLQQLQCYTS AKGHPFNRFA WGNKKSLSGA MENGVDLREC IVKLYKEYYH GGLMKLVVIG GESLDMLESW VVELFGDVKN
0301: GSKIRPTLEA EGPIWKGGKL YRLEAVKDVH ILDLTWTLPP LRSAYVKKPE DYLAHLLGHE GRGSLHSFLK AKGWATSLSA GVGDDGINRS SLAYVFGMSI
0401: HLTDSGLEKI YDIIGYIYQY LKLLRDVSPQ EWIFKELQDI GNMDFRFAEE QPADDYAAEL SENMLAYPVE HVIYGDYVYQ TWDPKLIEDL MGFFTPQNMR
0501: IDVVSKSIKS EEFQQEPWFG SSYIEEDVPL SLMESWSNPS EVDNSLHLPS KNQFIPCDFS IRAINSDVDP KSQSPPRCII DEPFMKFWYK LDETFKVPRA
0601: NTYFRINLKG AYASVKNCLL TELYINLLKD ELNEIIYQAS IAKLETSLSM YGDKLELKVY GFNEKIPALL SKILAIAKSF MPNLERFKVI KENMERGFRN
0701: TNMKPLNHST YLRLQLLCKR IYDSDEKLSV LNDLSLDDLN SFIPELRSQI FIEALCHGNL SEDEAVNISN IFKDSLTVEP LPSKCRHGEQ ITCFPMGAKL
0801: VRDVNVKNKS ETNSVVELYY QIEPEEAQST RTKAVLDLFH EIIEEPLFNQ LRTKEQLGYV VECGPRLTYR VHGFCFCVQS SKYGPVHLLG RVDNFIKDIE
0901: GLLEQLDDES YEDYRSGMIA RLLEKDPSLL SETNDLWSQI VDKRYMFDFS HKEAEELRSI QKKDVISWYK TYFRESSPKC RRLAVRVWGC DTNMKETQTD
1001: QKAVQVIADA VAFKSTSKFY PSLC
0101: DHQTKKAAAA MCVSMGSFLD PPEAQGLAHF LEHMLFMGST EFPDENEYDS YLSKHGGSSN AYTEMEHTCY HFEVKREFLQ GALKRFSQFF VAPLMKTEAM
0201: EREVLAVDSE FNQALQNDAC RLQQLQCYTS AKGHPFNRFA WGNKKSLSGA MENGVDLREC IVKLYKEYYH GGLMKLVVIG GESLDMLESW VVELFGDVKN
0301: GSKIRPTLEA EGPIWKGGKL YRLEAVKDVH ILDLTWTLPP LRSAYVKKPE DYLAHLLGHE GRGSLHSFLK AKGWATSLSA GVGDDGINRS SLAYVFGMSI
0401: HLTDSGLEKI YDIIGYIYQY LKLLRDVSPQ EWIFKELQDI GNMDFRFAEE QPADDYAAEL SENMLAYPVE HVIYGDYVYQ TWDPKLIEDL MGFFTPQNMR
0501: IDVVSKSIKS EEFQQEPWFG SSYIEEDVPL SLMESWSNPS EVDNSLHLPS KNQFIPCDFS IRAINSDVDP KSQSPPRCII DEPFMKFWYK LDETFKVPRA
0601: NTYFRINLKG AYASVKNCLL TELYINLLKD ELNEIIYQAS IAKLETSLSM YGDKLELKVY GFNEKIPALL SKILAIAKSF MPNLERFKVI KENMERGFRN
0701: TNMKPLNHST YLRLQLLCKR IYDSDEKLSV LNDLSLDDLN SFIPELRSQI FIEALCHGNL SEDEAVNISN IFKDSLTVEP LPSKCRHGEQ ITCFPMGAKL
0801: VRDVNVKNKS ETNSVVELYY QIEPEEAQST RTKAVLDLFH EIIEEPLFNQ LRTKEQLGYV VECGPRLTYR VHGFCFCVQS SKYGPVHLLG RVDNFIKDIE
0901: GLLEQLDDES YEDYRSGMIA RLLEKDPSLL SETNDLWSQI VDKRYMFDFS HKEAEELRSI QKKDVISWYK TYFRESSPKC RRLAVRVWGC DTNMKETQTD
1001: QKAVQVIADA VAFKSTSKFY PSLC
Arabidopsis Description
Nardilysin-like [Source:UniProtKB/Swiss-Prot;Acc:F4HNU6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.