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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 3
  • plastid 2
  • cytosol 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra013431.1-P Field mustard cytosol 97.95 96.67
AT1G80070.1 Thale cress cytosol 97.39 96.52
Bra005076.1-P Field mustard cytosol 87.08 88.95
Bra005075.1-P Field mustard nucleus 8.81 77.15
Bra003548.1-P Field mustard cytosol 1.37 60.38
Bra029460.1-P Field mustard nucleus 2.05 55.17
HORVU7Hr1G073700.1 Barley cytosol 0.21 17.24
Protein Annotations
Gene3D:1.20.58.1750Gene3D:1.20.80.40MapMan:16.4.1.4.4Gene3D:3.30.420.230Gene3D:3.40.140.10Gene3D:3.90.1570.40
EnsemblPlantsGene:Bra021701EnsemblPlants:Bra021701.1EnsemblPlants:Bra021701.1-Pncoils:CoilGO:GO:0000398GO:GO:0003674
GO:GO:0003676GO:GO:0003723GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005634GO:GO:0005681GO:GO:0006139GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0017070GO:GO:0030623InterPro:IPR037518InterPro:JAMM/MPN+_domUniProt:M4DYV5
InterPro:MPNPFAM:PD149576PFAM:PF01398PFAM:PF08082PFAM:PF08083PFAM:PF08084
PFAM:PF10596PFAM:PF10597PFAM:PF10598PFAM:PF12134InterPro:PRO8NTInterPro:PROCN
InterPro:PROCTInterPro:PRP8InterPro:PRP8_domainIVPFscan:PS50249PANTHER:PTHR11140InterPro:Prp8_U5-snRNA-bd
InterPro:Prp8_U6-snRNA-bdInterPro:RNaseH-like_sfInterPro:RRM_spliceosomal_PrP8SMART:SM00232SUPFAM:SSF53098UniParc:UPI00025449B6
SEG:seg:::::
Description
AT1G80070 (E=0.0) SUS2, EMB33, EMB177, EMB14 | SUS2 (ABNORMAL SUSPENSOR 2)
Coordinates
chrA04:+:13957341..13966773
Molecular Weight (calculated)
273020.0 Da
IEP (calculated)
9.050
GRAVY (calculated)
-0.468
Length
2338 amino acids
Sequence
(BLAST)
0001: MWNNNDGMPL APPGTGAPMI PPPHPSYTSL PPPSNPAPPP VEPTPEEAEA KLEEKARKWM QLNSKRYGDK RKFGFVETQK EDMPPEHVRK IIRDHGDMSS
0101: KKFRHDKRVY LGALKFVPHA VFKLLENMPM PWEQVRDVKV LYHITGAITF VNEIPWVVEP IYMAQWGTMW IMMRREKRDR RHFKRMRFPP FDDEEPPLDY
0201: ADNLLDVDPL EPIQLELDEE EDSAVHTWFY DHKPLVKTKL INGPSYRKWN LSLPIMATLH RLAGQLLSDL IDRNYFYLFD MPSFFTAKAL NMCIPGGPKF
0301: EPLYRDMEKG DEDWNEFNDI NKLIIRSPLR TEYRIAFPHL YNNRPRKVKL CVYHSPMVMY IKTEDPDLPA FYYDPLLHPI SNTNKERRER NVFEDDGEDD
0401: FILPEGVEPL LKDTHLYTDT TAAGISLLFA PRPFNMRSGR TRRSEDIPLV SEWFKEHCPP AYPVKVRVSY QKLLKCYVLN ELHHRPPKAQ KKKHLFRSLA
0501: ATKFFQSTEL DWVEVGLQVC RQGYNMLNLL IHRKNLNYLH LDYNFNLKPV KTLTTKERKK SRFGNAFHLC REILRLTKLV VDANVQFRLG NVDAFQLADG
0601: LQYIFSHVGQ LTGMYRYKYR LMRQIRMCKD LKHLIYYRFN TGPVGKGPGC GFWAPMWRVW LFFLRGIVPL LERWLGNLLA RQFEGRHSKG VAKTVTKQRV
0701: ESHFDLELRA AVMHDVLDAM PGFHSFECGI KQNKARTILQ HLSEAWRCWK ANIPWKVPGL PVPIENMILR YVKSKADWWT NVAHYNRERI RRGATVDKTV
0801: CRKNLGRLTR LWLKAEQERQ HNYLKDGPYV TPEEALAIYT TTVHWLESRK FSPIPFPPLS YKHDTKLLIL ALERLKESYS VAVRLNQQQR EELGLIEQAY
0901: DNPHEALSRI KRHLLTQRGF KEVGIEFMDL YSYLIPVYEI EPLEKITDAY LDQYLWYEGD KRHLFPSWIK PADSEPPPLL VYKWCQGINN LQGIWDTGDG
1001: QCVVMLQTKF EKFFEKIDLT MLNRLLRLVL DHNIADYVSA KNNVVLSYKV MSHTNSYGLI RGLQFASFVV QFYGLLLDLL LLGLTRASEI AGPPQMPNEF
1101: MTFWDTKVET RHPIRLYSRY IDKVHIMFKF THEEARDLIQ RYLTEHPDPN NENMVGYNNK KCWPRDARMR LMKHDVNLGR SVFWDMKNRL PRSITTLEWV
1201: NGFVSVYSKD NPNLLFSMCG FEVRILPKIR MTQEAFSNTR DGVWNLQNEQ TKERTAVAFL RVDDEHMKVF ENRVRQILMS SGSTTFTKIV NKWNTALIGL
1301: MTYFREATVH TQELLDLLVK CENKIQTRIK IGLNSKMPSR FPPVIFYTPK EIGGLGMLSM GHILIPQSDL RYSKQTDVGV THFRSGMSHE EDQLIPNLYR
1401: YIQPWESEFI DSQRVWAEYA LKRQEAQAQN RRLTLEDLED SWDRGIPRIN TLFQKDRHTL AYDKGWRVRT DFKQYQVLKQ NPFWWTHQRH DGKLWNLNNY
1501: RTDVIQALGG VEGILEHTLF KGTYFPTWEG LFWEKASGFE ESMKYKKLTN AQRSGLNQIP NRRFTLWWSP TINRANVYIF RAHLWQKIHE SVVMDLCQVL
1601: DQELDALEIE TVQKETIHPR KSYKMNSSCA DVLLFAAHKW PMSKPSLVAE SKDVFDQKAS NKYWIDVQLR WGDYDSHDIE RYTRAKFMDY TTDNMSIYPS
1701: PTGVMIGLDL AYNLHSAFGN WFPGSKPLLA QAMNKIMKSN PALYVLRERI RKGLQLYSSE PTEPYLSSQN YGEIFSNQII WFVDDTNVYR VTIHKTFEGN
1801: LTTKPINGAI FIFNPRTGQL FLKVIHTSVW AGQKRLGQLA KWKTAEEVAA LVRSLPVEEQ PKQVIVTRKG MLDPLEVHLL DFPNIVIKGS ELQLPFQACL
1901: KIEKFGDLIL KATEPQMVLF NIYDDWLKSI SSYTAFSRLI LILRALHVNN EKAKMLLKPD KSVVTEPHHI WPSLTDDQWM KVEVALRDLI LSDYAKKNNV
2001: NTSALTQSEI RDIILGAEIT PPSQQRQQIA EIEKQAKEAS QLNAVTTRTV NVHGEELIVT TTSPYEQTAF GSKTDWRVRA ISATNLYLRV NHIYVNSDDI
2101: KETGYTYIMP KNILKKFICV ADLRTQIAGY LYGISPPDNP QVKEIRCVVM VPQWGSHQQV NLPSALPEHD FLNDLEPLGW LHTQPNELPQ LAPQDVTAHS
2201: RILENNKQWD GEKCIILTCS FTPGSCSLTS YKLTQAGYEW GRLNKDTGSN PHGYLPTHYE KVQMLLSDRF LGFYMVPENG PWNYNFMGVK HTVGMKYSVK
2301: LGSPKEYYHE EHRPTHFLEF SNMEETDIAE GDREDTFA
Best Arabidopsis Sequence Match ( AT1G80070.1 )
(BLAST)
0001: MWNNNDGMPL APPGTGGSMM PPPPAAHPSY TALPPPSNPT PPVEPTPEEA EAKLEEKARK WMQLNSKRYG DKRKFGFVET QKEDMPPEHV RKIIRDHGDM
0101: SSKKFRHDKR VYLGALKFVP HAVFKLLENM PMPWEQVRDV KVLYHITGAI TFVNEIPWVV EPIYMAQWGT MWIMMRREKR DRRHFKRMRF PPFDDEEPPL
0201: DYADNLLDVD PLEPIQLELD EEEDSAVHTW FYDHKPLVKT KLINGPSYRR WNLSLPIMAT LHRLAGQLLS DLIDRNYFYL FDMPSFFTAK ALNMCIPGGP
0301: KFEPLYRDME KGDEDWNEFN DINKLIIRSP LRTEYRIAFP HLYNNRPRKV KLCVYHSPMI MYIKTEDPDL PAFYYDPLIH PISNTNKEKR ERKVYDDEDD
0401: FALPEGVEPL LRDTQLYTDT TAAGISLLFA PRPFNMRSGR TRRAEDIPLV SEWFKEHCPP AYPVKVRVSY QKLLKCYVLN ELHHRPPKAQ KKKHLFRSLA
0501: ATKFFQSTEL DWVEVGLQVC RQGYNMLNLL IHRKNLNYLH LDYNFNLKPV KTLTTKERKK SRFGNAFHLC REILRLTKLV VDANVQFRLG NVDAFQLADG
0601: LQYIFSHVGQ LTGMYRYKYR LMRQIRMCKD LKHLIYYRFN TGPVGKGPGC GFWAPMWRVW LFFLRGIVPL LERWLGNLLA RQFEGRHSKG VAKTVTKQRV
0701: ESHFDLELRA AVMHDVLDAM PEGIKQNKAR TILQHLSEAW RCWKANIPWK VPGLPVPIEN MILRYVKSKA DWWTNVAHYN RERIRRGATV DKTVCRKNLG
0801: RLTRLWLKAE QERQHNYLKD GPYVTPEEAL AIYTTTVHWL ESRKFSPIPF PPLSYKHDTK LLILALERLK ESYSVAVRLN QQQREELGLI EQAYDNPHEA
0901: LSRIKRHLLT QRGFKEVGIE FMDLYSYLIP VYEIEPLEKI TDAYLDQYLW YEGDKRHLFP NWIKPADSEP PPLLVYKWCQ GINNLQGIWD TGDGQCVVML
1001: QTKFEKFFEK IDLTMLNRLL RLVLDHNIAD YVSAKNNVVL SYKDMSHTNS YGLIRGLQFA SFVVQFYGLL LDLLLLGLTR ASEIAGPPQM PNEFMTFWDT
1101: KVETRHPIRL YSRYIDKVHI MFKFTHEEAR DLIQRYLTEH PDPNNENMVG YNNKKCWPRD ARMRLMKHDV NLGRSVFWDM KNRLPRSITT LEWENGFVSV
1201: YSKDNPNLLF SMCGFEVRIL PKIRMTQEAF SNTKDGVWNL QNEQTKERTA VAFLRVDDEH MKVFENRVRQ ILMSSGSTTF TKIVNKWNTA LIGLMTYFRE
1301: ATVHTQELLD LLVKCENKIQ TRIKIGLNSK MPSRFPPVIF YTPKEIGGLG MLSMGHILIP QSDLRYSKQT DVGVTHFRSG MSHEEDQLIP NLYRYIQPWE
1401: SEFIDSQRVW AEYALKRQEA QAQNRRLTLE DLEDSWDRGI PRINTLFQKD RHTLAYDKGW RVRTDFKQYQ VLKQNPFWWT HQRHDGKLWN LNNYRTDVIQ
1501: ALGGVEGILE HTLFKGTYFP TWEGLFWEKA SGFEESMKYK KLTNAQRSGL NQIPNRRFTL WWSPTINRAN VYVGFQVQLD LTGIFMHGKI PTLKISLIQI
1601: FRAHLWQKIH ESVVMDLCQV LDQELDALEI ETVQKETIHP RKSYKMNSSC ADVLLFAAHK WPMSKPSLVA ESKDMFDQKA SNKYWIDVQL RWGDYDSHDI
1701: ERYTRAKFMD YTTDNMSIYP SPTGVMIGLD LAYNLHSAFG NWFPGSKPLL AQAMNKIMKS NPALYVLRER IRKGLQLYSS EPTEPYLSSQ NYGEIFSNQI
1801: IWFVDDTNVY RVTIHKTFEG NLTTKPINGA IFIFNPRTGQ LFLKVIHTSV WAGQKRLGQL AKWKTAEEVA ALVRSLPVEE QPKQIIVTRK GMLDPLEVHL
1901: LDFPNIVIKG SELQLPFQAC LKIEKFGDLI LKATEPQMVL FNIYDDWLKS ISSYTAFSRL ILILRALHVN NEKAKMLLKP DKSVVTEPHH IWPSLTDDQW
2001: MKVEVALRDL ILSDYAKKNN VNTSALTQSE IRDIILGAEI TPPSQQRQQI AEIEKQAKEA SQLTAVTTRT TNVHGDELIV TTTSPYEQSA FGSKTDWRVR
2101: AISATNLYLR VNHIYVNSDD IKETGYTYIM PKNILKKFIC VADLRTQIAG YLYGISPPDN PQVKEIRCVV MVPQWGNHQL VHLPSSLPEH DFLNDLEPLG
2201: WLHTQPNELP QLSPQDVTSH SRILENNKQW DGEKCIILTC SFTPGSCSLT SYKLTQTGYE WGRLNKDNGS NPHGYLPTHY EKVQMLLSDR FLGFYMVPES
2301: GPWNYSFTGV KHTLSMKYSV KLGSPKEFYH EEHRPTHFLE FSNMEEADIT EGDREDTFT
Arabidopsis Description
PRP8ASUS2 [Source:UniProtKB/TrEMBL;Acc:A0A178W7J7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.