Factsheet for Bra024289.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY58269	Canola	nucleus	94.55	86.45
AT5G64360.7	Thale cress	nucleus	66.01	65.3
Bra031921.1-P	Field mustard	cytosol	47.49	59.08
Bra009389.1-P	Field mustard	cytosol	32.46	50.85
VIT_03s0017g00300.t01	Wine grape	nucleus	41.39	39.09
KRH42098	Soybean	nucleus	37.04	37.36
KRH49811	Soybean	nucleus	37.91	36.94
Bra026639.1-P	Field mustard	cytosol	23.75	34.82
KRH21766	Soybean	nucleus	37.04	34.07
KRH10601	Soybean	nucleus	35.73	33.0
GSMUA_Achr3P06790_001	Banana	cytosol	21.13	29.85
Solyc07g007230.2.1	Tomato	nucleus	26.8	28.87
Zm00001d047214_P001	Maize	extracellular	24.62	28.46
EER92178	Sorghum	nucleus	24.18	27.54
HORVU4Hr1G039650.1	Barley	nucleus	23.75	27.39
GSMUA_Achr10P...	Banana	cytosol	24.84	27.08
TraesCS4D01G156000.1	Wheat	nucleus	23.53	26.93
TraesCS4B01G160100.1	Wheat	cytosol	23.31	26.68
Zm00001d029409_P001	Maize	nucleus, peroxisome, plastid	22.44	26.01
Os07t0620200-01	Rice	cytosol, mitochondrion, nucleus	22.44	26.01
TraesCS4A01G160900.1	Wheat	cytosol	22.66	26.0
Solyc11g006170.1.1	Tomato	nucleus	35.29	24.96
Os03t0392400-01	Rice	nucleus	22.0	24.94
PGSC0003DMT400073845	Potato	cytosol	35.08	24.69
GSMUA_Achr1P21390_001	Banana	cytosol	21.35	24.32
PGSC0003DMT400079004	Potato	cytosol	26.58	23.87
Solyc01g105780.2.1	Tomato	nucleus	36.6	23.43
HORVU2Hr1G030250.2	Barley	cytosol	19.61	23.14
TraesCS2A01G165100.1	Wheat	cytosol	19.61	23.02
TraesCS2B01G191300.1	Wheat	cytosol	19.61	22.96
TraesCS2D01G172200.1	Wheat	cytosol	19.39	22.76
PGSC0003DMT400083794	Potato	nucleus	36.82	22.75
KXG36712	Sorghum	cytosol	21.35	22.53
Os09t0463700-01	Rice	nucleus	18.08	22.31
Zm00001d022168_P001	Maize	cytosol, mitochondrion, peroxisome	21.35	22.17
Solyc11g006140.1.1	Tomato	nucleus	28.54	22.02
Zm00001d047043_P001	Maize	nucleus	20.7	21.94
HORVU5Hr1G055620.1	Barley	cytosol, nucleus, plastid	13.73	21.28
EES14021	Sorghum	nucleus	20.48	21.27
KXG35797	Sorghum	nucleus	17.43	20.83
Bra027007.1-P	Field mustard	nucleus	30.5	18.77
Zm00001d020762_P001	Maize	nucleus	17.65	18.41
TraesCS5D01G252200.1	Wheat	cytosol, nucleus, plastid	19.39	16.89
TraesCS5B01G242900.1	Wheat	cytosol	18.95	16.51
HORVU5Hr1G069570.1	Barley	nucleus	19.17	16.12
TraesCS5A01G245400.1	Wheat	cytosol, nucleus, plastid	18.52	16.1

Protein Annotations

EnsemblPlants:Bra024289.1	EnsemblPlants:Bra024289.1-P	EnsemblPlantsGene:Bra024289	Gene3D:1.10.287.110	InterPro:DnaJ_domain	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	PANTHER:PTHR45496	PFAM:PF00226	PFscan:PS50076	SEG:seg
SMART:SM00271	SUPFAM:SSF46565	UniParc:UPI000253F3AC	UniProt:M4E685	MapMan:12.5.1.16.2	:

Description

AT5G64360 (E=3e-164) | DNAJ heat shock N-terminal domain-containing protein

Coordinates

chrA06:-:14754850..14756229

Molecular Weight (calculated)

50263.1 Da

IEP (calculated)

5.402

GRAVY (calculated)

-0.469

Length

459 amino acids

Sequence
(BLAST)

001: MVGGGDGERG GVGGRGGNKA EANQLLVTSE KLLSSSDFQG AKASAIRACK SDPSLAEAAD SILTICDVLI ASEIRLGDSK LPDWYAALRL GRLAQNPEHV
101: ATQYRRLALL LNPSVNRFPL ADQAFKVVSE AWHVLSDPSR KSLYDQEVQL SQLVQPQKQR FVWKPSQSTT NVVVAQQPPS VAQPPRRSDP MATSFWTACP
201: YCFVLFEYPK AYEECVLRCQ DCRRAFQAVT IQKPPVEGEG EDVYFCSWSV FPLGFSGEFR APSWSPISPL IACPLQMVDD ERTRKKRKEP APPRFFYDDD
301: DIYVAISDDD HEENDPNELQ AKNVGKGKEK LVRGNKKHGS EKAGRGIQHV ETIGGASNHA ASIASYVTPV GSSSMSKPMS IRKRTGTGAK NLGRLDLNVE
401: FSNEVEEPAV AGGRNEGNGL GSNREVDNME GIGFFEDLDE FLSSLPIFSV DGDDKIKAT

Best Arabidopsis Sequence Match ( AT5G64360.4 )
(BLAST)

001: MVGGRGGVGG GGGNRVEADQ WLVTSEKLLA SSDLQGAKTF AIRACEADPT RAEAADYILA ICDILLAGET RLGDSNLPDW YAVLRLGRLA QNPEHVATQY
101: RRLALLLNPS VNRLPFADRA LKIVSDAWFV LSDPFKKSFY DRELQLSQLG QSGFHPQTQS HQNFQWEPSS STAVYPPPRS QSQAGTSADP MATSFWTACP
201: YCFVLFEYPK AYEECTLKCQ ECRRAFQAVT IPKPPVDKKD DEDVYFCSWA LFPLGFSGEF QAPSWSPISP LFACPLQKLD GEPKKRKEPG PPRIYYDDDD
301: IYVAISDGDD AGDDGDWQDV VQVNKKTNVG KGKETYVRSN KKHGVEEVQN VESISSASNH AVSIASNAAA VGSSTGVMSK PGSYITRKRM GTGAKNLGRL
401: DLNVEFSNEV EEPGVAGGGN AGNGIGSNRE VDNMEGIGFF EGLDEFLNSL PILSVVGDDK IKAT

Arabidopsis Description

AT5G64360 protein [Source:UniProtKB/TrEMBL;Acc:Q9FMF3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.