Factsheet for Bra027007.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
endoplasmic reticulum 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, endoplasmic reticulum, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	endoplasmic reticulum
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45966	Canola	nucleus	92.9	93.15
Bra009389.1-P	Field mustard	cytosol	16.49	41.98
AT1G62970.1	Thale cress	nucleus	39.28	36.76
Bra031921.1-P	Field mustard	cytosol	17.96	36.31
Bra026639.1-P	Field mustard	cytosol	14.34	34.19
GSMUA_Achr3P06790_001	Banana	cytosol	13.67	31.38
Bra024289.1-P	Field mustard	nucleus	18.77	30.5
Solyc07g007230.2.1	Tomato	nucleus	16.49	28.87
VIT_03s0017g00300.t01	Wine grape	nucleus	17.96	27.57
Os09t0463700-01	Rice	nucleus	13.4	26.88
KRH42098	Soybean	nucleus	16.35	26.81
KRH49811	Soybean	nucleus	16.89	26.75
KXG35797	Sorghum	nucleus	13.27	25.78
GSMUA_Achr10P...	Banana	cytosol	14.21	25.18
EES14021	Sorghum	nucleus	14.61	24.66
PGSC0003DMT400079004	Potato	cytosol	16.76	24.46
EER92178	Sorghum	nucleus	12.87	23.82
Zm00001d047214_P001	Maize	extracellular	12.6	23.68
KRH10601	Soybean	nucleus	15.68	23.54
Os07t0620200-01	Rice	cytosol, mitochondrion, nucleus	12.47	23.48
KRH21766	Soybean	nucleus	15.68	23.45
TraesCS5D01G252200.1	Wheat	cytosol, nucleus, plastid	16.35	23.15
HORVU4Hr1G039650.1	Barley	nucleus	12.33	23.12
GSMUA_Achr1P21390_001	Banana	cytosol	12.47	23.08
HORVU5Hr1G055620.1	Barley	cytosol, nucleus, plastid	9.12	22.97
TraesCS4B01G160100.1	Wheat	cytosol	12.33	22.94
TraesCS4D01G156000.1	Wheat	nucleus	12.33	22.94
TraesCS4A01G160900.1	Wheat	cytosol	12.2	22.75
Zm00001d029409_P001	Maize	nucleus, peroxisome, plastid	12.06	22.73
TraesCS5A01G245400.1	Wheat	cytosol, nucleus, plastid	16.09	22.73
Zm00001d047043_P001	Maize	nucleus	13.14	22.63
TraesCS5B01G242900.1	Wheat	cytosol	15.68	22.2
HORVU5Hr1G069570.1	Barley	nucleus	16.22	22.16
Zm00001d020762_P001	Maize	nucleus	12.87	21.82
Os03t0392400-01	Rice	nucleus	11.8	21.73
HORVU2Hr1G030250.2	Barley	cytosol	11.26	21.59
Zm00001d022168_P001	Maize	cytosol, mitochondrion, peroxisome	12.6	21.27
KXG36712	Sorghum	cytosol	12.06	20.69
TraesCS2B01G191300.1	Wheat	cytosol	10.86	20.66
TraesCS2A01G165100.1	Wheat	cytosol	10.72	20.46
TraesCS2D01G172200.1	Wheat	cytosol	10.46	19.95
Solyc01g105780.2.1	Tomato	nucleus	18.9	19.67
Solyc11g006170.1.1	Tomato	nucleus	16.22	18.64
PGSC0003DMT400073845	Potato	cytosol	16.09	18.4
PGSC0003DMT400083794	Potato	nucleus	18.1	18.17
Solyc11g006140.1.1	Tomato	nucleus	14.21	17.82

Protein Annotations

EnsemblPlants:Bra027007.1	EnsemblPlants:Bra027007.1-P	EnsemblPlantsGene:Bra027007	Gene3D:1.10.287.110	InterPro:DnaJ_domain	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	PANTHER:PTHR45496	PFAM:PF00226	PFscan:PS50076	SEG:seg
SUPFAM:SSF46565	UniParc:UPI00025424F7	UniProt:M4EDZ7	MapMan:12.5.1.16.2	:	:

Description

AT1G62970 (E=2e-191) | DNAJ heat shock N-terminal domain-containing protein

Coordinates

chrA09:-:7539825..7542140

Molecular Weight (calculated)

81857.9 Da

IEP (calculated)

7.640

GRAVY (calculated)

-0.806

Length

746 amino acids

Sequence
(BLAST)

001: MMSGGGNGGG GEGGDAERWL MTAQKLLLSG DLNGSKTYAI RACEADHSLV DPAELILAVA DTLLAGESRI RADLPDWYAV LRLVRLTHNP ELVATQYSRL
101: AVLLNPSRNR FPYSDQAFRL ISDAWYVLSD PSRKALYDRE VHLSQFGQLG QLGFQLLNQP PQSPQHQDES PQHQTVSYQS QQLPFQLHQH SHFAQPQQVM
201: QSQPLQQFGH ESEMIRSGGS SSSSGRDWRL PVEEERSINL NTATERVQPS RRFHDQERSS SGRSYEEASS QRAPPPSTDL TWSSKPTPTS EPIALQSSGQ
301: FQPPRSNQAA QLSLLSLVSD QPSVSQPNRS AQTHSVSKPQ PVSSKLFPMS QPSSNPLAGT GLREAPRPFA ASKPFSGSQS SQKSKPFAAS QPPTNSKPSA
401: VSQRSLNSNP FPVSEPPRTS NPFPASQPPQ NAKASPVSQP QQTSSNPFRV SQQPPTSRPI PVSQPQPQPP PTSSNPFMVS QPTTASKPLP VSQQPSTSKP
501: MMVTQPPQQA FQSQPPEASG GPSTLSPIFS STQSFHQPPV STTPPPVPAV STTPSPIPVA STNPSPPQPT GVTNQTQHTE QTPSSDSHPK VPSFWTTCPY
601: CFVLFEYPDM YEESVLKCQT KSCRRAFQAV KVPSPPPVAE EDTYYCCWGF YPIGFAETAK IPDLPRGFPV YDIPRTAPKK ASRKVYYNED EDDDEYIDSD
701: PSEDDDDDDD DWHMNGTKRR KNVKQSKQKA STKPRLGKPR KVIVVD

Best Arabidopsis Sequence Match ( AT1G62970.1 )
(BLAST)

001: MMSHGGGGGV SNGGGGDAER MLAQAEKLLL SGDLNGSKTY AIRACEADHS LVDHAELILA VADTLVAGES RIRGTTSDLP DWYAVLRLVR LTHNPELVAT
101: QYSRLAVLLN PSRNRYPYSE QAFRLISDAW YVLSDPSRKT LYDRELHLSQ FGQLGQLGFQ LFNQTPQSQS QSPQHHQQQS QSPQHPNQNQ TVSFQNQQLP
201: FQLHQPHFAQ AVQTQSQSQQ QRSQFDQQLL QEQQQASWRQ QVGQEHSSGS SGDWKRPVEE VRLINLNNAT ERVQSSRRFA EPERPPSRSF EGSSHRTPST
301: ELTWASKPTP VSEPVRHSEL VPWQYSEPAR QYQLSSRSSE AAQLSLLPSV SDSSHASQPT RSNQSHAVSK PQPVSKPHPP FPMSQPPPTS NPFPLSQPPS
401: NSKPFPMSQS SQNSKPFPVS QSSQKSKPLL VSQSSQRSKP LPVSQSLQNS NPFPVSQPSS NSKPFPVSQP QPASNPFPVS QPRPNSQPFS MSQPSSTARP
501: FPASQPPAAS KSFPISQPPT TSKPFVSQPP NTSKPMPVSQ PPTTSKPLPV SQPPPTFQST CPSQPPAASS SLSPLPPVFN STQSFQSPPV STTPSAVPEA
601: STIPSPPAPA PVAQPTHVFN QTPPPEQTPK SGAARTDSEP EVSSFWTTCP YCYVLYEYPI IYEESVLKCQ TKSCRRAYQA VKVPSPPPVA EEDSYYCCWG
701: FYPIGFSEVV TKIPVTGLHT KIPVSDLPKS APKKPSPKVY YYDDEEEDDD SYIGSDPSED DDDDDWLMNG TKRRKNVKQS KAKATTKPKR QKVIEVD

Arabidopsis Description

Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WQM3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.