Factsheet for Bra028776.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY14135	Canola	nucleus	95.28	83.8
Bra005829.1-P	Field mustard	nucleus	78.58	77.36
Bra009409.1-P	Field mustard	nucleus	80.63	76.99
Bra009408.1-P	Field mustard	nucleus	61.57	76.37
AT5G04940.2	Thale cress	nucleus	78.11	74.03
KRH56252	Soybean	nucleus	19.06	56.81
Bra016018.1-P	Field mustard	nucleus	58.9	55.24
VIT_13s0047g00120.t01	Wine grape	nucleus	58.27	51.68
KRH62706	Soybean	nucleus	54.02	51.42
KRH20576	Soybean	nucleus	53.39	50.37
KRH13229	Soybean	nucleus	53.07	50.07
Solyc09g082050.2.1	Tomato	nucleus	47.56	46.68
VIT_08s0040g00360.t01	Wine grape	nucleus	52.76	45.45
PGSC0003DMT400018512	Potato	nucleus	51.34	45.4
Solyc10g077070.1.1	Tomato	nucleus	51.02	45.38
PGSC0003DMT400077329	Potato	nucleus	47.72	45.16
KRH66648	Soybean	nucleus	48.35	43.36
GSMUA_Achr5P27620_001	Banana	nucleus	41.89	43.04
Zm00001d010646_P001	Maize	plastid	43.78	42.64
EES19725	Sorghum	nucleus	44.88	42.28
Os12t0128450-00	Rice	nucleus	40.63	42.02
Os05t0490700-01	Rice	extracellular	44.41	41.96
TraesCS1B01G378900.1	Wheat	nucleus	44.25	41.69
KRG95012	Soybean	plastid	31.97	41.6
TraesCS1D01G366800.1	Wheat	nucleus	44.25	41.57
TraesCS1A01G362000.1	Wheat	nucleus	43.94	41.27
Os11t0131600-00	Rice	nucleus	43.15	41.27
Zm00001d038541_P002	Maize	nucleus	44.57	40.9
Bra005362.1-P	Field mustard	nucleus	26.3	40.83
TraesCS1D01G307700.1	Wheat	nucleus	43.31	40.8
TraesCS1B01G319000.1	Wheat	nucleus	43.15	40.65
TraesCS1A01G308300.1	Wheat	nucleus	42.83	40.36
TraesCS5A01G140500.1	Wheat	nucleus	42.99	40.03
TraesCS5D01G152000.1	Wheat	nucleus	42.68	39.39
TraesCS4B01G280000.1	Wheat	nucleus	44.88	39.31
Zm00001d041005_P001	Maize	nucleus	43.15	39.2
TraesCS5B01G138800.1	Wheat	nucleus	42.99	38.45
EES01635	Sorghum	nucleus	44.88	38.41
Os01t0811300-01	Rice	nucleus, plasma membrane	43.31	37.36
Os11t0602200-01	Rice	nucleus	47.4	37.02
TraesCS3A01G385200.1	Wheat	plastid	42.2	36.91
OQU78645	Sorghum	nucleus	43.31	36.86
TraesCS3A01G336100.1	Wheat	nucleus	42.99	36.64
EER96081	Sorghum	nucleus	47.4	36.27
TraesCS4D01G278500.1	Wheat	nucleus	46.77	36.26
TraesCS3B01G367200.1	Wheat	nucleus	42.36	36.2
TraesCS3B01G366900.1	Wheat	nucleus	42.36	36.2
TraesCS3D01G329100.1	Wheat	nucleus	42.05	35.94
TraesCS4A01G023500.1	Wheat	nucleus	47.09	35.85
EES10399	Sorghum	nucleus	45.98	35.65
Zm00001d043135_P003	Maize	nucleus	43.62	35.56
Zm00001d019195_P001	Maize	nucleus	47.56	35.28
TraesCS3B01G417400.1	Wheat	nucleus	45.83	34.93
Bra022109.1-P	Field mustard	cytosol	13.39	34.0
TraesCS3D01G378200.1	Wheat	plastid	35.91	33.28
Bra007048.1-P	Field mustard	nucleus	30.87	31.06
Bra005511.1-P	Field mustard	plastid	28.19	29.2
Bra004258.1-P	Field mustard	nucleus	42.2	29.16
Bra021840.1-P	Field mustard	nucleus, plastid	29.13	29.04
Bra025949.1-P	Field mustard	nucleus	40.47	28.78
Bra006226.1-P	Field mustard	nucleus	26.93	28.6
Bra024960.1-P	Field mustard	cytosol, mitochondrion, nucleus	13.86	26.51
Bra030212.1-P	Field mustard	nucleus	31.81	25.51
Bra031976.1-P	Field mustard	nucleus	13.54	24.93
Bra022108.1-P	Field mustard	mitochondrion	13.54	23.43
Bra024959.1-P	Field mustard	nucleus	13.39	22.97
Bra036004.1-P	Field mustard	nucleus	14.96	15.2
Bra033710.1-P	Field mustard	nucleus	15.91	13.47
Bra001104.1-P	Field mustard	nucleus	14.96	12.57
Bra039210.1-P	Field mustard	plastid	5.35	11.11
Bra040197.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	15.75	10.62
Bra032148.1-P	Field mustard	nucleus	17.95	8.35
HORVU6Hr1G090170.1	Barley	cytosol	0.16	0.8

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.7	MapMan:12.5.1.16.1	Gene3D:2.170.270.10	Gene3D:2.30.280.10	EnsemblPlantsGene:Bra028776
EnsemblPlants:Bra028776.1	EnsemblPlants:Bra028776.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005694	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0008270	GO:GO:0009987	GO:GO:0016043
GO:GO:0016571	GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0032259	GO:GO:0034968
InterPro:Hist-Lys_N-MeTrfase_plant	InterPro:IPR001214	InterPro:IPR003105	InterPro:IPR003616	InterPro:IPR007728	InterPro:IPR025794
InterPro:IPR036987	UniProt:M4EJ11	PFAM:PF00856	PFAM:PF02182	PFAM:PF05033	PFscan:PS50280
PFscan:PS50868	PFscan:PS51015	PFscan:PS51575	PANTHER:PTHR22884	PANTHER:PTHR22884:SF415	InterPro:PUA-like_sf
InterPro:Post-SET_dom	InterPro:Pre-SET_dom	InterPro:SET_dom	SMART:SM00317	SMART:SM00466	SMART:SM00468
InterPro:SRA-YDG_sf	InterPro:SRA_YDG	SUPFAM:SSF82199	SUPFAM:SSF88697	UniParc:UPI000254310C	SEG:seg

Description

AT5G04940 (E=3e-253) SUVH1 | SUVH1 (SU(VAR)3-9 HOMOLOG 1); histone methyltransferase

Coordinates

chrA02:-:2108895..2110802

Molecular Weight (calculated)

70407.2 Da

IEP (calculated)

7.491

GRAVY (calculated)

-0.472

Length

635 amino acids

Sequence
(BLAST)

001: MEESFRSYTD KTSVYDIKPL RTLKPVFPSG NHQSPPPFVC SPPFGPFPPG FSPFYPFTSS QPHTHNNSNP SSVTPLRSFR SDAEGSTPKR KTPKKLVRPD
101: NVNFESGITS PERENGNRNL VTSVLTRYEA LRRRFSQLED AREAVSGINK RADLKAGSTC MSRGVRTNTK KRPGIVPGVE IGDIFFFRFE MCLVGLHSPS
201: MAGIDYLLLK GDTEEEDTIT IATSIVSSGY YDNEEGDPDV LVYTGQGGGN ADKEKQTSDQ KLERGNLALE KSLVRNSPVR VIRGLKEASP SVKIYLYDGL
301: YEVKESWVEK GKLGHNTFKY KLVRAPGQPP AFATWIGIQK WKGGLTSREG LILADLSSGV ESIGVSLVNE VDDENGPGYF TYSTKVTYSE SFKLTQPSIG
401: CCDCSSSCKP GSLNFRCVRR NGGDYPYCGN GVLVSRKGMV YECSSSCPCL VCKLKVTQMG VKVKLEVFKT VDRGWGLRSW DPIRAGSFIC IYAGEAKEKE
501: KTMENDDYAF DTTRVYTAFK WNYERGLADE VDSEEVSEEP EMPLPLVISG KDVGNVARFM NHSCSPNVFW QPVSYEDNGQ LFLHVAFFAV SHIPPMTELT
601: YDYGVTRPSG AQNGDTLYGM KKCFCGSEYC RGSFG

Best Arabidopsis Sequence Match ( AT5G04940.1 )
(BLAST)

001: MERNGGHYTD KTRVLDIKPL RTLRPVFPSG NQAPPFVCAP PFGPFPPGFS SFYPFSSSQA NQHTPDLNQA QYPPQHQQPQ NPPPVYQQQP PQHASEPSLV
101: TPLRSFRSPD VSNGNAELEG STVKRRIPKK RPISRPENMN FESGINVADR ENGNRELVLS VLMRFDALRR RFAQLEDAKE AVSGIIKRPD LKSGSTCMGR
201: GVRTNTKKRP GIVPGVEIGD VFFFRFEMCL VGLHSPSMAG IDYLVVKGET EEEPIATSIV SSGYYDNDEG NPDVLIYTGQ GGNADKDKQS SDQKLERGNL
301: ALEKSLRRDS AVRVIRGLKE ASHNAKIYIY DGLYEIKESW VEKGKSGHNT FKYKLVRAPG QPPAFASWTA IQKWKTGVPS RQGLILPDMT SGVESIPVSL
401: VNEVDTDNGP AYFTYSTTVK YSESFKLMQP SFGCDCANLC KPGNLDCHCI RKNGGDFPYT GNGILVSRKP MIYECSPSCP CSTCKNKVTQ MGVKVRLEVF
501: KTANRGWGLR SWDAIRAGSF ICIYVGEAKD KSKVQQTMAN DDYTFDTTNV YNPFKWNYEP GLADEDACEE MSEESEIPLP LIISAKNVGN VARFMNHSCS
601: PNVFWQPVSY ENNSQLFVHV AFFAISHIPP MTELTYDYGV SRPSGTQNGN PLYGKRKCFC GSAYCRGSFG

Arabidopsis Description

SUVH1Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FF80]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.