Factsheet for Bra031535.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
PProwler:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY06223	Canola	cytosol	21.24	97.52
CDY09961	Canola	cytosol	21.0	95.63
AT1G06700.3	Thale cress	cytosol	19.98	92.24
Bra015521.1-P	Field mustard	cytosol	19.44	88.28
Bra022812.1-P	Field mustard	cytosol	18.3	84.02
Bra021663.1-P	Field mustard	cytosol	18.12	82.07
Bra018295.1-P	Field mustard	cytosol	18.0	81.97
Bra014115.1-P	Field mustard	cytosol	11.52	77.73
Bra041158.1-P	Field mustard	cytosol	6.12	77.27
Bra007444.1-P	Field mustard	cytosol	17.58	72.89
Bra014542.1-P	Field mustard	cytosol	17.7	72.48
Bra003373.1-P	Field mustard	cytosol	17.58	71.81
Bra021244.1-P	Field mustard	cytosol	4.98	70.94
Bra037729.1-P	Field mustard	cytosol	17.28	70.24
Bra004479.1-P	Field mustard	cytosol	14.88	68.32
Bra004752.1-P	Field mustard	cytosol, plasma membrane	17.4	67.92
Bra021242.1-P	Field mustard	cytosol	14.52	66.48
Bra001662.1-P	Field mustard	cytosol	14.16	65.01
Bra000248.1-P	Field mustard	cytosol	13.92	63.74
Bra014110.1-P	Field mustard	cytosol	13.74	63.43
Bra004665.1-P	Field mustard	cytosol	13.92	63.22
Bra016899.1-P	Field mustard	cytosol	13.5	62.85
Bra022213.1-P	Field mustard	cytosol	14.88	59.05
GSMUA_Achr5P25660_001	Banana	cytosol, mitochondrion, nucleus, plastid	11.4	53.37
Bra014408.1-P	Field mustard	cytosol	8.04	53.17
GSMUA_Achr2P20880_001	Banana	mitochondrion	12.9	52.83
TraesCS2B01G366600.1	Wheat	cytosol	10.44	47.15
EES11040	Sorghum	cytosol	10.5	47.04
TraesCS2A01G348200.1	Wheat	cytosol	10.38	46.88
TraesCS2D01G346600.1	Wheat	cytosol	10.32	46.61
Zm00001d003212_P001	Maize	cytosol	10.44	46.52

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.38.1	Gene3D:3.30.200.20	Gene3D:3.40.50.300	InterPro:AARP2CN	InterPro:BMS1_TSR1_C
InterPro:Bms1_N	EnsemblPlantsGene:Bra031535	EnsemblPlants:Bra031535.1	EnsemblPlants:Bra031535.1-P	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004713	GO:GO:0005488	GO:GO:0005524
GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0018108	GO:GO:0019538	GO:GO:0042254	InterPro:G_Bms1/Tsr1_dom	InterPro:IPR000719	InterPro:IPR030387
InterPro:Kinase-like_dom_sf	UniProt:M4ERV8	InterPro:P-loop_NTPase	PFAM:PF04950	PFAM:PF07714	PFAM:PF08142
ScanProsite:PS00107	ScanProsite:PS00109	PFscan:PS50011	PFscan:PS51714	PANTHER:PTHR12858	PANTHER:PTHR12858:SF2
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00219	SMART:SM00785	SMART:SM01362	SUPFAM:SSF52540
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Tyr_kinase_AS	InterPro:Tyr_kinase_cat_dom	UniParc:UPI00025434B4	SEG:seg

Description

AT1G06720 (E=0.0) | INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AARP2CN (InterPro:IPR012948), Protein of unknown function DUF663 (InterPro:IPR007034); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G42440.1); Has 7944 Blast hits to 5342 proteins in 373 species: Archae - 33; Bacteria - 667; Metazoa - 2609; Fungi - 1045; Plants - 414; Viruses - 80; Other Eukaryotes - 3096 (source: NCBI BLink).

Coordinates

chrA09:+:35934267..35943707

Molecular Weight (calculated)

187412.0 Da

IEP (calculated)

7.048

GRAVY (calculated)

-0.640

Length

1667 amino acids

Sequence
(BLAST)

0001: MAADELMPTH KSHRAPKSGR TMKKKSETDK KKRGVSDNKK QNPKAFSFTS AAKAKILKLH AAEKEQKRIH LPTIDRNYGD PPPFVVVVQG PPGVGKSLLI
0101: KSLVKHFTHQ NVPEVRGPIT IVQGKRNRIQ FVECPNDING MVDCAKVADL AILLIDGSYG FEMETFEFLN IMQVHGFPKV MGVLTHLDKF NDVKKLRKTK
0201: KRLTHRFWTE IYKGAKLFYL SGLIHGKYSK LEVDKLSCFI SLSLTKFHPL KWRTSHPYVL ADRMEDVSPP EKVQMDKKCE RNISLYGYLR GCNLKKGMKV
0301: HIAGVGDYSL AGVTALPDPC PLPSAAKKKG LRDREKLFYA PMSGIGDLLY DKDAVYININ DHLVQYSKAD DEIGDPTNKG KGRDVGEDLV KSLQNTKYSV
0401: DEKLGKTFIN LFGKKTISTS SERKLEEESS ESGDEAEDCV MDVESSDGKT KQKNEIHGGR LRRKAIFKDE VGDSDAMGSD QDDVEGEEDV ESDGDESEDE
0501: EDDSASDSQD LDEDDVQEAE DKVLGNISKW KEPLKEKGRE KKPNLMQIVY GAPGPSATTP LVNETHAISD DDEESDAEDF FKPKGEQSKN LGGAINVGYV
0601: NADDCSRFVN YGNLKNWKEK EDCEIIRNRF TTGDWSKAAL RNQNSVADNE GEDDELYGDF EDLEEAGEKH NIDENMESEV VERSLKKLAL RAKFDANNPI
0701: YSEAKELGYV DKLKEELETR KQMNMLELND LDEDTRIEVE GFRTGTYLRL EIHNVPCEMV EFFDPCHPVL IGGIGYGEDN AGYMQARLKK HRWHKKVLKT
0801: RDPIIVSIGW RRYQTVPVYA IEDRNDRHRM LKYTPEHMHC LATFWGPLVP PNTGFVAFQN LSSNQAGFRI TATSVVLEYS HQARIAKKIK LVGHPCKIKK
0901: KTAFIKDMFT SDLEIARFEG SSVRTVSGIR GQVKKAGKNM LNNNAQEGIA RCTFEDQIKM SDIVFLKAWP TVEVPQFYNP LTTALQPRER TWRGMRTFWE
1001: LRRQQNIPIP VNKDSLYKPI ERKIKKFNPL VISKKLQEEL PFASKPKNKP GRKRPSLDAR RAVVMEPGER RALAIVQQLK LMNKVKMIKR KVKEQEKRKA
1101: YEAEKAKEVI SKKRNREERR ERNVTERSVA THDGEVEDRR ECKNLQKLTA GEDVLTEHDS GDVDHGGTVG GAGDRVHHGQ EDRVAEAVVE EEVLVQDKDS
1201: YVETEPGGDA AVRTEGDTVG EEKKKGFSLE EAEECGGVPG MSMIVGVVVA AEWNFGLLIR RVVHELPPFW IERQTPLSFS LINAEATIAR DELSTERLER
1301: NIERVAGRDI RRIQDSTEEE HLKSSHQQSD ATNHKNPKPA AVAKSDAQKE PLPVEVPPLS LDEVKEKTEN FGSKALIGEG SYGRVYYATL NDGVAVALKK
1401: LDVSPEAESD AEFLSQVSMV SRLKHENLVQ LLGFCVDGSL RVLAYEFATM GSLHDILHGR KGVQGAQPGP TLDWTTRVKI AVEAARGLEY LHEKSQPPVI
1501: HRDIRSSNVL LFEDYKAKIA DFNLSNQAPD NAARLHSTRV LGTFGYHAPE YAMTGQLTQK SDVYSFGVVL LELLTGRKPV DHTMPRGQQS LVTWATPRLS
1601: EDKVKQCIDP KLKADYPPKA VAKLAAVAAL CVQYESEFRP NMSIVVKALQ PLLKVAVPAP PSPAPES

Best Arabidopsis Sequence Match ( AT1G06720.2 )
(BLAST)

0001: MAADELMPSH RSHRTPKSGP TARKKSELDK KKRGISVDKQ KNLKAFGVKS VVHAKKAKHH AAEKEQKRLH LPKIDRNYGE APPFVVVVQG PPGVGKSLVI
0101: KSLVKEFTKQ NVPEVRGPIT IVQGKQRRFQ FVECPNDINA MVDCAKVADL ALLVVDGSYG FEMETFEFLN IMQVHGFPRV MGVLTHLDKF NDVKKLRKTK
0201: HHLKHRFWTE IYHGAKLFYL SGLIHGKYTP REVHNLARFV IVIKPQPLTW RTAHPYVLVD RLEDVTPPEK VQMDKKCDRN ITVFGYLRGC NFKKRMKVHI
0301: AGVGDFIVAG VTALTDPCPL PSAGKKKGLR DRDKLFYAPM SGIGDLVYDK DAVYININSH QVQYSKTDDG KGEPTNKGKG RDVGEDLVKS LQNTKYSVDE
0401: KLDKTFINFF GKKTSASSET KLKAEDAYHS LPEGSDSESQ SGDDEEDIVG NESEMKQETE IHGGRLRRKA IFKTDLNEDD FEEADDLELD SYDPDTYDFE
0501: EADDAESDDN EVEDGGDDSA SDSADGEPGD YQIDDKDSGN ISQWKAPLKE IARKKNPNLM QIVYGASSLA TPLINENHDI SDDDESDDED FFKPKGEQHK
0601: NLGGGLDVGY VNSEDCSKFV NYGYLKNWKE KEVCESIRDR FTTGDWSKAA LRDKNLGTGG EGEDDELYGD FEDLETGEKH KSHENLESGA NENEDEDAEV
0701: VERRLKKLAR RAKFDAESNK SELEEDDNDK GDGNNPRSQA DEPGYADKLK EAQEITKQRN ELEYNDLDEE TRIELAGFRT GTYLRLEIHN VPYEMVEFFD
0801: PCHPILVGGI GFGEDNVGYM QARLKKHRWH KKVLKTRDPI IVSIGWRRYQ TIPVFAIEDR NGRHRMLKYT PEHMHCLASF WGPLVPPNTG FVAFQNLSNN
0901: QAGFRITATS VVLEFNHQAR IVKKIKLVGT PCKIKKKTAF IKDMFTSDLE IARFEGSSVR TVSGIRGQVK KAGKNMLDNK AEEGIARCTF EDQIHMSDMV
1001: FLRAWTTVEV PQFYNPLTTA LQPRDKTWNG MKTFGELRRE LNIPIPVNKD SLYKAIERKQ KKFNPLQIPK RLEKDLPFMS KPKNIPKRKR PSLEDKRAVI
1101: MEPKERKEHT IIQQFQLLQH HTMKKKKATD QKKRKEYEAE KAKNEEINKK RRREERRDRY REEDKQKKKT RRSLD

Arabidopsis Description

P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:TAIR;Acc:AT1G06720]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.