Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- plastid 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY51153 | Canola | cytosol | 39.32 | 93.64 |
| Bra008521.1-P | Field mustard | plastid | 24.76 | 57.95 |
| Bra014450.1-P | Field mustard | cytosol | 1.94 | 4.73 |
| Bra004936.1-P | Field mustard | cytosol | 2.18 | 4.48 |
| Bra039316.1-P | Field mustard | cytosol | 2.18 | 4.39 |
| Bra000402.1-P | Field mustard | cytosol | 1.94 | 3.96 |
| Bra007581.1-P | Field mustard | cytosol | 1.7 | 3.74 |
Protein Annotations
| MapMan:27.2.8 | Gene3D:3.40.1170.10 | EnsemblPlantsGene:Bra037345 | EnsemblPlants:Bra037345.1 | EnsemblPlants:Bra037345.1-P | InterPro:C2_dom |
| InterPro:DNA_mismatch_repair_MutS-lik_N | InterPro:DNA_mismatch_repair_MutS_N | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006298 |
| GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0009987 | GO:GO:0016740 |
| GO:GO:0030983 | GO:GO:0032259 | InterPro:IPR000008 | InterPro:IPR016151 | UniProt:M4F8D3 | PFAM:PF00168 |
| PFAM:PF01624 | PFAM:PF03141 | PANTHER:PTHR32246 | PANTHER:PTHR32246:SF20 | InterPro:Put_SAM_MeTrfase | SMART:SM00239 |
| SUPFAM:SSF49562 | UniParc:UPI0002541AA5 | SEG:seg | : | : | : |
Description
AT3G24495 (E=1e-028) MSH7, MSH6-2, ATMSH7 | MSH7 (MUTS HOMOLOG 7); ATP binding / damaged DNA binding / mismatched DNA binding
Coordinates
chrA09:+:955431..958163
Molecular Weight (calculated)
45688.4 Da
IEP (calculated)
8.197
GRAVY (calculated)
-0.331
Length
412 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSESLLACA AEKPKPCRES LVSKGMPTRK LEITAISAEG LLEGRKPVKK NAFVAFEIAG NHCSGAIRTR IDEVGGDYPA WEDKLEMEFS LPEEKKDKES
101: FLYVGVYCQL VSGKDKHVGT ARVPIKDFTG GYAPEGFLHC LSYRLWDEYG KRTGIVNFSA RIVKAGSSKI GAFAGLDQHY ARCYWEFSKA RLRYKVGRIE
201: QLETSDQAKA RGANTIIPRK LVQVLTPSTA SEGNLGPDPV HLLAIKEVKM ELEKCSTVQK WPELWPKRLV SVKPQSVSAD TKTSKKDTEK WSEIVSDVYL
301: ERLAVNWSSV RNVMDMNAGF GGQLGSDSES RVNGSSCVER IEFVNPLYTL SHSLYKERYI SSVVPQAESV SAHSLSLQFP TTQEVSLLLL HSDIFLHISL
401: TSDSNFSTSP SS
101: FLYVGVYCQL VSGKDKHVGT ARVPIKDFTG GYAPEGFLHC LSYRLWDEYG KRTGIVNFSA RIVKAGSSKI GAFAGLDQHY ARCYWEFSKA RLRYKVGRIE
201: QLETSDQAKA RGANTIIPRK LVQVLTPSTA SEGNLGPDPV HLLAIKEVKM ELEKCSTVQK WPELWPKRLV SVKPQSVSAD TKTSKKDTEK WSEIVSDVYL
301: ERLAVNWSSV RNVMDMNAGF GGQLGSDSES RVNGSSCVER IEFVNPLYTL SHSLYKERYI SSVVPQAESV SAHSLSLQFP TTQEVSLLLL HSDIFLHISL
401: TSDSNFSTSP SS
001: MQRQRSILSF FQKPTAATTK GLVSGDAASG GGGSGGPRFN VKEGDAKGDA SVRFAVSKSV DEVRGTDTPP EKVPRRVLPS GFKPAESAGD ASSLFSNIMH
101: KFVKVDDRDC SGERSREDVV PLNDSSLCMK ANDVIPQFRS NNGKTQERNH AFSFSGRAEL RSVEDIGVDG DVPGPETPGM RPRASRLKRV LEDEMTFKED
201: KVPVLDSNKR LKMLQDPVCG EKKEVNEGTK FEWLESSRIR DANRRRPDDP LYDRKTLHIP PDVFKKMSAS QKQYWSVKSE YMDIVLFFKV GKFYELYELD
301: AELGHKELDW KMTMSGVGKC RQVGISESGI DEAVQKLLAR GYKVGRIEQL ETSDQAKARG ANTIIPRKLV QVLTPSTASE GNIGPDAVHL LAIKEIKMEL
401: QKCSTVYGFA FVDCAALRFW VGSISDDASC AALGALLMQV SPKEVLYDSK GLSREAQKAL RKYTLTGSTA VQLAPVPQVM GDTDAAGVRN IIESNGYFKG
501: SSESWNCAVD GLNECDVALS ALGELINHLS RLKLEDVLKH GDIFPYQVYR GCLRIDGQTM VNLEIFNNSC DGGPSGTLYK YLDNCVSPTG KRLLRNWICH
601: PLKDVESINK RLDVVEEFTA NSESMQITGQ YLHKLPDLER LLGRIKSSVR SSASVLPALL GKKVLKQRVK AFGQIVKGFR SGIDLLLALQ KESNMMSLLY
701: KLCKLPILVG KSGLELFLSQ FEAAIDSDFP NYQNQDVTDE NAETLTILIE LFIERATQWS EVIHTISCLD VLRSFAIAAS LSAGSMARPV IFPESEATDQ
801: NQKTKGPILK IQGLWHPFAV AADGQLPVPN DILLGEARRS SGSIHPRSLL LTGPNMGGKS TLLRATSWLL RAV
101: KFVKVDDRDC SGERSREDVV PLNDSSLCMK ANDVIPQFRS NNGKTQERNH AFSFSGRAEL RSVEDIGVDG DVPGPETPGM RPRASRLKRV LEDEMTFKED
201: KVPVLDSNKR LKMLQDPVCG EKKEVNEGTK FEWLESSRIR DANRRRPDDP LYDRKTLHIP PDVFKKMSAS QKQYWSVKSE YMDIVLFFKV GKFYELYELD
301: AELGHKELDW KMTMSGVGKC RQVGISESGI DEAVQKLLAR GYKVGRIEQL ETSDQAKARG ANTIIPRKLV QVLTPSTASE GNIGPDAVHL LAIKEIKMEL
401: QKCSTVYGFA FVDCAALRFW VGSISDDASC AALGALLMQV SPKEVLYDSK GLSREAQKAL RKYTLTGSTA VQLAPVPQVM GDTDAAGVRN IIESNGYFKG
501: SSESWNCAVD GLNECDVALS ALGELINHLS RLKLEDVLKH GDIFPYQVYR GCLRIDGQTM VNLEIFNNSC DGGPSGTLYK YLDNCVSPTG KRLLRNWICH
601: PLKDVESINK RLDVVEEFTA NSESMQITGQ YLHKLPDLER LLGRIKSSVR SSASVLPALL GKKVLKQRVK AFGQIVKGFR SGIDLLLALQ KESNMMSLLY
701: KLCKLPILVG KSGLELFLSQ FEAAIDSDFP NYQNQDVTDE NAETLTILIE LFIERATQWS EVIHTISCLD VLRSFAIAAS LSAGSMARPV IFPESEATDQ
801: NQKTKGPILK IQGLWHPFAV AADGQLPVPN DILLGEARRS SGSIHPRSLL LTGPNMGGKS TLLRATSWLL RAV
Arabidopsis Description
MSH7DNA mismatch repair protein MSH7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SMV7]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.