Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plasma membrane 6
- extracellular 7
- endoplasmic reticulum 5
- golgi 5
- vacuole 6
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY09061 | Canola | extracellular | 98.44 | 98.44 |
| Bra039563.1-P | Field mustard | plasma membrane | 71.48 | 62.89 |
| Bra037084.1-P | Field mustard | extracellular | 62.5 | 61.3 |
| AT4G15160.1 | Thale cress | extracellular | 62.5 | 58.18 |
| VIT_03s0017g02260.t01 | Wine grape | extracellular | 43.36 | 56.92 |
| TraesCS7D01G020100.1 | Wheat | cytosol, plastid | 23.44 | 54.05 |
| Bra001852.1-P | Field mustard | extracellular | 54.3 | 53.26 |
| VIT_03s0017g02200.t01 | Wine grape | extracellular | 41.02 | 50.24 |
| GSMUA_Achr2P01500_001 | Banana | endoplasmic reticulum, extracellular | 30.08 | 49.68 |
| TraesCS2B01G444500.1 | Wheat | extracellular | 31.25 | 48.78 |
| TraesCS2D01G422700.1 | Wheat | extracellular | 30.86 | 48.17 |
| TraesCS2A01G424800.1 | Wheat | extracellular | 30.47 | 47.56 |
| Bra023850.1-P | Field mustard | extracellular | 41.8 | 46.52 |
| TraesCS7D01G020000.1 | Wheat | plastid | 25.0 | 45.07 |
| Bra031329.1-P | Field mustard | extracellular | 59.77 | 45.0 |
| TraesCS7A01G024100.1 | Wheat | plastid | 25.78 | 44.3 |
| TraesCS2D01G422800.1 | Wheat | extracellular, plastid | 33.59 | 44.1 |
| Os06t0168700-01 | Rice | plastid | 40.62 | 42.28 |
| Zm00001d026282_P001 | Maize | extracellular | 26.17 | 41.61 |
| Zm00001d002347_P001 | Maize | extracellular | 23.44 | 41.38 |
| OQU82307 | Sorghum | extracellular, plasma membrane | 23.05 | 39.86 |
| HORVU2Hr1G099450.1 | Barley | endoplasmic reticulum | 29.3 | 39.06 |
| TraesCS7A01G024200.1 | Wheat | plastid | 33.59 | 38.74 |
| KRG90032 | Soybean | extracellular | 48.83 | 38.11 |
| HORVU7Hr1G027440.2 | Barley | extracellular | 41.41 | 37.46 |
| Os04t0612500-01 | Rice | endoplasmic reticulum, plasma membrane, vacuole | 12.89 | 37.08 |
| Bra037196.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 35.55 | 35.83 |
| KRH17654 | Soybean | extracellular | 53.12 | 35.42 |
| PGSC0003DMT400035207 | Potato | extracellular | 51.95 | 34.1 |
| Bra027040.1-P | Field mustard | extracellular | 39.45 | 33.01 |
| EER89284 | Sorghum | endoplasmic reticulum, vacuole | 39.84 | 31.48 |
| TraesCS7B01G031800.1 | Wheat | extracellular | 38.67 | 30.84 |
| HORVU2Hr1G099370.2 | Barley | mitochondrion | 32.42 | 30.74 |
| HORVU2Hr1G099470.5 | Barley | extracellular | 35.16 | 18.99 |
Protein Annotations
| EnsemblPlants:Bra038089.1 | EnsemblPlants:Bra038089.1-P | EnsemblPlantsGene:Bra038089 | Gene3D:1.10.110.10 | InterPro:Bifun_inhib/LTP/seed_sf | InterPro:Hydrophob_seed |
| PANTHER:PTHR31731 | PANTHER:PTHR31731:SF52 | PFAM:PF14547 | PFscan:PS51257 | PRINTS:PR01217 | SEG:seg |
| SignalP:SignalP-noTM | SUPFAM:SSF47699 | UniParc:UPI0002545BEC | UniProt:M4FAH5 | MapMan:35.1 | : |
Description
AT4G15160 (E=2e-043) | lipid binding / structural constituent of cell wall
Coordinates
chrA08:+:6614289..6615059
Molecular Weight (calculated)
26823.2 Da
IEP (calculated)
9.064
GRAVY (calculated)
-0.280
Length
256 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLLHKQNLS FVILLLGFLV VSYACDCGDP PKPSPHPVKP PKHPVKPPKP PTVKPPPHTP RPPTVKPPHT PSPPHSFPPY TPKPPTVTPP PPYTPSPPPY
101: TPKPPTVKPP PQPTPTPSPP PPYVKPPPVP TPETPCPPPP PPSPPPTPCP PTPPAPTPEP ETCSIDALKL GACVDVLGGL IHIGLGKSYA KATCCPVLGG
201: LVGLDAAVCL CTTIRAKLLN IDLIIPIALE LLVDCGKTPP RDFKCPAPQR KSPLLG
101: TPKPPTVKPP PQPTPTPSPP PPYVKPPPVP TPETPCPPPP PPSPPPTPCP PTPPAPTPEP ETCSIDALKL GACVDVLGGL IHIGLGKSYA KATCCPVLGG
201: LVGLDAAVCL CTTIRAKLLN IDLIIPIALE LLVDCGKTPP RDFKCPAPQR KSPLLG
001: MYLLTHSFQK PKPSFQKMGS RSQNLSFLVL LLLGFVAVSY ACDCTPPKPS PAPHKPPKHP VKPPKPPAVK PPKPPAVKPP TPKPPTVKPH PKPPTVKPHP
101: KPPTVKPHPK PPTVKPPHPK PPTKPHPHPK PPIVKPPTKP PPSTPKPPTK PPPSTPKPPT TKPPPSTPKP PHHKPPPTPC PPPTPTPTPP VVTPPTPTPP
201: VITPPTPTPP VVTPPTPTPP VITPPTPTPP VITPPTPTPP VVTPPTPTPP VVTPPTPTPP TPIPETCPID TLKLGACVDV LGGLIHIGLG KSHAKAECCP
301: VLGGLLDLDA AVCLCTTIKL KLLNIDLVLP IALELLLDCG KTPPSDFKCP A
101: KPPTVKPHPK PPTVKPPHPK PPTKPHPHPK PPIVKPPTKP PPSTPKPPTK PPPSTPKPPT TKPPPSTPKP PHHKPPPTPC PPPTPTPTPP VVTPPTPTPP
201: VITPPTPTPP VVTPPTPTPP VITPPTPTPP VITPPTPTPP VVTPPTPTPP VVTPPTPTPP TPIPETCPID TLKLGACVDV LGGLIHIGLG KSHAKAECCP
301: VLGGLLDLDA AVCLCTTIKL KLLNIDLVLP IALELLLDCG KTPPSDFKCP A
Arabidopsis Description
CWLPCell wall-plasma membrane linker protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSA3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.