Factsheet for Bra039210.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
nucleus 3
mitochondrion 1
cytosol 1
plasma membrane 2
extracellular 2
endoplasmic reticulum 2
golgi 2
vacuole 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
EpiLoc:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY46064	Canola	nucleus	95.1	59.15
Bra032148.1-P	Field mustard	nucleus	69.93	15.67
AT2G23740.2	Thale cress	nucleus	68.3	15.12
Os02t0708600-01	Rice	nucleus	23.86	12.97
KRH28566	Soybean	nucleus	46.73	9.9
Bra031976.1-P	Field mustard	nucleus	11.11	9.86
KRH76897	Soybean	nucleus	46.73	9.58
VIT_04s0023g00980.t01	Wine grape	nucleus	47.06	9.49
KRH69981	Soybean	nucleus	44.77	9.17
KRH08338	Soybean	nucleus	44.12	9.02
Solyc02g089970.2.1	Tomato	nucleus	44.12	8.95
GSMUA_Achr5P08830_001	Banana	nucleus	33.01	8.89
Bra005362.1-P	Field mustard	nucleus	11.76	8.8
Bra036004.1-P	Field mustard	nucleus	16.67	8.16
Bra033710.1-P	Field mustard	nucleus	17.65	7.2
Zm00001d017798_P002	Maize	nucleus	34.64	7.1
Bra006226.1-P	Field mustard	nucleus	13.4	6.86
Bra009408.1-P	Field mustard	nucleus	11.44	6.84
KXG30908	Sorghum	nucleus	35.29	6.78
TraesCS6D01G254900.2	Wheat	nucleus	35.62	6.75
TraesCS6A01G274600.1	Wheat	nucleus	35.95	6.74
TraesCS6B01G302100.2	Wheat	nucleus	35.62	6.72
HORVU6Hr1G069350.6	Barley	nucleus	35.29	6.66
Bra001104.1-P	Field mustard	nucleus	16.34	6.61
Zm00001d051590_P001	Maize	nucleus	30.07	6.11
Bra005829.1-P	Field mustard	nucleus	11.76	5.58
Bra028776.1-P	Field mustard	nucleus	11.11	5.35
Bra009409.1-P	Field mustard	nucleus	11.11	5.11
Bra016018.1-P	Field mustard	nucleus	11.11	5.02
Bra007048.1-P	Field mustard	nucleus	10.13	4.91
Bra040197.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	15.03	4.88
Bra021840.1-P	Field mustard	nucleus, plastid	10.13	4.87
Bra005511.1-P	Field mustard	plastid	9.15	4.57
Bra030212.1-P	Field mustard	nucleus	11.76	4.55
Bra025949.1-P	Field mustard	nucleus	11.76	4.03
Bra004258.1-P	Field mustard	nucleus	11.76	3.92
Bra022109.1-P	Field mustard	cytosol	1.63	2.0
GSMUA_Achr5P08820_001	Banana	cytosol	1.31	1.69
Bra024960.1-P	Field mustard	cytosol, mitochondrion, nucleus	1.31	1.2
Os02t0708500-01	Rice	cytosol	1.63	1.15
Bra022108.1-P	Field mustard	mitochondrion	1.31	1.09
Bra024959.1-P	Field mustard	nucleus	0.98	0.81
Zm00001d044165_P001	Maize	nucleus	0.0	0.0

Protein Annotations

Gene3D:2.170.270.10	MapMan:50.2.1	EnsemblPlantsGene:Bra039210	EnsemblPlants:Bra039210.1	EnsemblPlants:Bra039210.1-P	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR001214	UniProt:M4FDN9	PFAM:PF00856	PANTHER:PTHR22884
PANTHER:PTHR22884:SF296	InterPro:SET_dom	SMART:SM00317	SUPFAM:SSF82199	SignalP:SignalP-noTM	UniParc:UPI0002542E68

Description

AT2G23740 (E=5e-041) | nucleic acid binding / transcription factor/ zinc ion binding

Coordinates

chrA09:-:31490425..31493720

Molecular Weight (calculated)

34610.9 Da

IEP (calculated)

5.017

GRAVY (calculated)

-0.418

Length

306 amino acids

Sequence
(BLAST)

001: MVNAIILFNL FLFRNSPAKS VAETTEQQNG SKSIFNSDVH ASRKRPKLEI RRGETGNASQ MESDTENTHV MNGLVLWDGI VVEEKESNEL SQGQDRNINE
101: SVMKKPFGFG NKSQQCIAFI ESKGRQCVCP GLVCSPLTCD HVYLFGDDFE EARDVYGKSM RCRFPYDDEE RIILEGWGVR ACEHILRGTF VCEYIGEVLD
201: QQEANKRRIQ YGKEGCSYIH DVDANINDIG RIMGEPDYVV DATTHVNVSR CSPNLVTHQD VEESMESLLA RIGLYASTDG RLFFLFSVSL KEVSPNRSFM
301: LCCNNR

Best Arabidopsis Sequence Match ( AT2G23740.1 )
(BLAST)

0001: MEVKMDELVL DVDVEEATGS ELLVKSEPEA DLNAVKSSTD LVTVTGPIGK NGEGESSPSE PKWLQQDEPI ALWVKWRGKW QAGIRCAKAD WPLTTLRGKP
0101: THDRKKYCVI FFPHTKNYSW ADMQLVRSIN EFPDPIAYKS HKIGLKLVKD LTAARRYIMR KLTVGMFNIV DQFPSEVVSE AARDIIIWKE FAMEATRSTS
0201: YHDLGIMLVK LHSMILQRYM DPIWLENSFP LWVQKCNNAV NAESIELLNE WNEVKSLSES PMQPMLLSEW KTWKHDIAKW FSISRRGVGE IAQPDSKSVF
0301: NSDVQASRKR PKLEIRRAET TNATHMESDT SPQGLSAIDS EFFSSRGNTN SPETMKEENP VMNTPENGLD LWDGIVVEAG GSQFMKTKET NGLSHPQDQH
0401: INESVLKKPF GSGNKSQQCI AFIESKGRQC VRWANEGDVY CCVHLASRFT TKSMKNEGSP AVEAPMCGGV TVLGTKCKHR SLPGFLYCKK HRPHTGMVKP
0501: DDSSSFLVKR KVSEIMSTLE TNQCQDLVPF GEPEGPSFEK QEPHGATSFT EMFEHCSQED NLCIGSCSEN SYISCSEFST KHSLYCEQHL PNWLKRARNG
0601: KSRIISKEVF VDLLRGCLSR EEKLALHQAC DIFYKLFKSV LSLRNSVPME VQIDWAKTEA SRNADAGVGE FLMKLVSNER ERLTRIWGFA TGADEEDVSL
0701: SEYPNRLLAI TNTCDDDDDK EKWSFSGFAC AICLDSFVRR KLLEIHVEER HHVQFAEKCM LLQCIPCGSH FGDKEQLLVH VQAVHPSECK SLTVASECNL
0801: TNGEFSQKPE AGSSQIVVSQ NNENTSGVHK FVCKFCGLKF NLLPDLGRHH QAEHMGPSLV GSRGPKKGIR FNTYRMKSGR LSRPNKFKKS LGAVSYRIRN
0901: RAGVNMKRRM QGSKSLGTEG NTEAGVSPPL DDSRNFDGVT DAHCSVVSDI LLSKVQKAKH RPNNLDILSA ARSACCRVSV ETSLEAKFGD LPDRIYLKAA
1001: KLCGEQGVQV QWHQEGYICS NGCKPVKDPN LLHPLIPRQE NDRFGIAVDA GQHSNIELEV DECHCIMEAH HFSKRPFGNT AVLCKDISFG KESVPICVVD
1101: DDLWNSEKPY EMPWECFTYV TNSILHPSMD LVKENLQLRC SCRSSVCSPV TCDHVYLFGN DFEDARDIYG KSMRCRFPYD GKQRIILEEG YPVYECNKFC
1201: GCSRTCQNRV LQNGIRAKLE VFRTESKGWG LRACEHILRG TFVCEYIGEV LDQQEANKRR NQYGNGDCSY ILDIDANIND IGRLMEEELD YAIDATTHGN
1301: ISRFINHSCS PNLVNHQVIV ESMESPLAHI GLYASMDIAA GEEITRDYGR RPVPSEQENE HPCHCKATNC RGLLS

Arabidopsis Description

SUVR5Histone-lysine N-methyltransferase SUVR5 [Source:UniProtKB/Swiss-Prot;Acc:O64827]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.