CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plasma membrane 1
extracellular 1
endoplasmic reticulum 1
golgi 1
vacuole 1
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra009409.1-P	Field mustard	nucleus	65.22	99.25
CDX98804	Canola	nucleus	55.93	92.33
CDY11319	Canola	nucleus	53.46	83.88
CDX80930	Canola	nucleus	53.26	83.7
AT5G04940.2	Thale cress	nucleus	54.15	81.79
CDX98805	Canola	nucleus	50.0	77.25
CDY14135	Canola	nucleus	52.57	73.68
CDY04931	Canola	cytosol, extracellular, nucleus	5.43	72.37
CDX96449	Canola	nucleus	38.34	59.06
CDY11129	Canola	nucleus	38.93	58.89
CDX68245	Canola	nucleus	38.64	58.71
CDY61331	Canola	nucleus	38.74	58.59
CDY59935	Canola	nucleus	37.45	57.51
GSMUA_Achr5P27620_001	Banana	nucleus	25.99	42.56
EES19725	Sorghum	nucleus	27.77	41.69
Os12t0128450-00	Rice	nucleus	25.2	41.53
Zm00001d010646_P001	Maize	plastid	26.68	41.41
Os11t0131600-00	Rice	nucleus	26.98	41.11
TraesCS1B01G378900.1	Wheat	nucleus	27.17	40.8
Os05t0490700-01	Rice	extracellular	27.08	40.77
Zm00001d038541_P002	Maize	nucleus	27.87	40.75
TraesCS1D01G366800.1	Wheat	nucleus	27.17	40.68
TraesCS1A01G362000.1	Wheat	nucleus	27.08	40.53
TraesCS1D01G307700.1	Wheat	nucleus	26.78	40.21
TraesCS1A01G308300.1	Wheat	nucleus	26.68	40.06
TraesCS1B01G319000.1	Wheat	nucleus	26.68	40.06
TraesCS5A01G140500.1	Wheat	nucleus	26.68	39.59
TraesCS5D01G152000.1	Wheat	nucleus	26.88	39.53
TraesCS4B01G280000.1	Wheat	nucleus	28.06	39.17
Zm00001d041005_P001	Maize	nucleus	26.38	38.2
TraesCS5B01G138800.1	Wheat	nucleus	26.78	38.17
TraesCS3A01G336100.1	Wheat	nucleus	27.77	37.72
Os01t0811300-01	Rice	nucleus, plasma membrane	27.37	37.64
TraesCS3A01G385200.1	Wheat	plastid	26.98	37.6
EES01635	Sorghum	nucleus	27.57	37.6
TraesCS3B01G366900.1	Wheat	nucleus	27.57	37.55
TraesCS3B01G367200.1	Wheat	nucleus	27.57	37.55
OQU78645	Sorghum	nucleus	27.47	37.27
TraesCS3D01G329100.1	Wheat	nucleus	27.27	37.15
Os11t0602200-01	Rice	nucleus	29.55	36.78
TraesCS4D01G278500.1	Wheat	nucleus	29.64	36.63
EER96081	Sorghum	nucleus	29.84	36.39
CDY26218	Canola	nucleus	25.0	36.25
TraesCS4A01G023500.1	Wheat	nucleus	29.84	36.21
EES10399	Sorghum	nucleus	28.95	35.78
TraesCS3B01G417400.1	Wheat	nucleus	29.25	35.53
Zm00001d043135_P003	Maize	nucleus	27.17	35.3
CDY66122	Canola	nucleus	24.8	35.15
Zm00001d019195_P001	Maize	nucleus	29.64	35.05
TraesCS3D01G378200.1	Wheat	plastid	23.52	34.74
CDY28970	Canola	cytosol	8.3	33.6
CDY56214	Canola	nucleus	25.69	32.79
CDY17156	Canola	nucleus	18.08	32.33
CDX73506	Canola	nucleus	20.16	32.23
CDX78210	Canola	nucleus	19.96	32.01
CDY19475	Canola	nucleus	17.39	31.88
CDY40566	Canola	cytosol, plastid	8.7	31.1
CDY23755	Canola	nucleus	19.27	30.61
CDY37735	Canola	nucleus, plastid	18.87	29.98
CDX70530	Canola	nucleus	17.0	28.52
CDY26221	Canola	nucleus	25.1	28.38
CDX78549	Canola	nucleus	16.8	28.15
CDX84255	Canola	nucleus	19.86	27.88
CDY31670	Canola	nucleus	19.66	27.75
CDY40567	Canola	mitochondrion	8.6	27.1
CDY25627	Canola	nucleus	19.76	26.81
CDX89510	Canola	nucleus	19.86	26.52
CDY33517	Canola	cytosol, mitochondrion, nucleus	8.6	26.2
CDX77744	Canola	cytosol	8.5	25.9
CDY50660	Canola	nucleus	8.4	25.3
CDY28971	Canola	mitochondrion	8.5	25.15
CDY51752	Canola	nucleus	8.2	24.7
CDY33518	Canola	nucleus	8.3	23.08
CDX77745	Canola	nucleus	8.3	21.82
CDX74192	Canola	nucleus	8.3	17.99
CDX92067	Canola	nucleus	8.2	17.58
CDY49341	Canola	nucleus	8.5	15.44
CDY01852	Canola	plasma membrane	26.78	14.6
CDY14903	Canola	nucleus	8.89	14.06
CDX94744	Canola	nucleus	9.29	13.72
CDY22319	Canola	nucleus	9.49	13.62
CDX96935	Canola	nucleus	9.39	12.12
CDY42922	Canola	plasma membrane, vacuole	9.58	11.71
CDY46064	Canola	nucleus	5.63	11.59
CDY62521	Canola	nucleus	10.87	8.05
CDY39668	Canola	nucleus	10.77	7.98
CDX89821	Canola	cytosol	0.1	1.23
CDX86631	Canola	cytosol	0.1	1.23
CDY21127	Canola	cytosol	0.1	1.23
CDY49340	Canola	cytosol	0.1	1.23
HORVU6Hr1G090170.1	Barley	cytosol	0.1	0.8
CDX92068	Canola	mitochondrion	0.1	0.71
CDY15508	Canola	mitochondrion	0.1	0.71
CDY18235	Canola	mitochondrion	0.1	0.71
CDY53193	Canola	mitochondrion	0.1	0.71
CDX74191	Canola	mitochondrion	0.1	0.71
CDY42923	Canola	mitochondrion	0.1	0.71

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.7	MapMan:12.5.1.16.1	Gene3D:2.170.270.10	Gene3D:2.30.280.10	GO:A0A078C0B4
EnsemblPlants:CDX70182	ProteinID:CDX70182	ProteinID:CDX70182.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009987	GO:GO:0016043	GO:GO:0016571
GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0034968	EnsemblPlantsGene:GSBRNA2T00136302001	InterPro:Hist-Lys_N-MeTrfase_plant
InterPro:IPR001214	InterPro:IPR003105	InterPro:IPR003616	InterPro:IPR007728	InterPro:IPR025794	InterPro:IPR036987
PFAM:PF00856	PFAM:PF02182	PFAM:PF05033	PFscan:PS50280	PFscan:PS50867	PFscan:PS50868
PFscan:PS51015	PFscan:PS51575	PANTHER:PTHR22884	PANTHER:PTHR22884:SF415	InterPro:PUA-like_sf	InterPro:Post-SET_dom
InterPro:Pre-SET_dom	InterPro:SET_dom	SMART:SM00317	SMART:SM00466	SMART:SM00468	InterPro:SRA-YDG_sf
InterPro:SRA_YDG	SUPFAM:SSF82199	SUPFAM:SSF88697	UniParc:UPI0004EE8555	SEG:seg	:

Description

BnaA10g25310D

Coordinates

chrLK031790:+:3440820..3445621

Molecular Weight (calculated)

111680.0 Da

IEP (calculated)

7.359

GRAVY (calculated)

-0.398

Length

1012 amino acids

Sequence
(BLAST)

0001: MCLVGLHSPS MAGIDYLVIK GGDAEEEEPI ATSIVSSAYT ENDRVNPDVL VYTGQGGHAD KDKEASDQKL ERGNLALEKS LHRNNAVRVI RGLNLKEATH
0101: RVKIYVYDGI YEIKEAWIEK GKSGHDTFKY KLVRAPNQPP GFATWTEIQS WKTGKSPRRG LILPDLTSGV ESVAVSLVNE VDSENGPSYF TYSTTVKYSM
0201: SFQLTQPSSG CADEDASEEV SEEPQLPLPL IISAKNIGNV ARFMNHSCSP NVFWQPVSYE NNGQLYLHVA FFAISHIPPK TELTYDYGVS RPTGAQNGNP
0301: VYGKKRCFCG TQYCRGSFAF CYLLNLYIHY LITGSGSDCF WFTGKLTMEG NFGSYTDKTR VLDIKPLRTL RPVFPSGNQA PPFVCAPPFG PFPPGFSPFY
0401: PFSSSQHTPD LNQAQNPPQH HHHHHSEPSL VTPLRTFRSP PDTTTSNGDV EPSTVKRKIT KKRTPLVCPE NFSSGISVVD RENGNRKLVT SVIMRFDALR
0501: RRFSQLEDAK EAVSGSIKRG DLKAGSTCMS RGVRTNTKKR PGVVPGVEIG DVFFFRFEMC LVGLHSPSMA GIDYLLVKGG GETGEEPIAT SIVSSGYYDN
0601: DEGNPDVLVY TGQGGGNADK EKQTSDQKLE RGNLALEKSL LRNSPVRVIR GLKEASQSAK IYVYDGLYEI KESWVEKGKL GHNTFKYKLV RAPGQPPAFA
0701: SWIAIQKWKA GLPSREGLIL PDLTSGVESI GVSLVNDVDA ENGPPYFTYS TTVNYSESFK LSQPSSGCHC SNACKPGNLD CHCIRKNGGD FPYCGNGVLV
0801: SRKSMVYECS PSCPCSACKN KVTQMGVKVK LEVFKTVNRG WGLRSWDPIR AGSFICIYAG EAKDKSKVQQ TMADDDYTFD TTRVYTPFKW NYELGLADED
0901: ASEEMSEEPE LPLPLVISAK NAGNVARFMN HSCSPNVFWQ PVSYEHNGQL YLQVAFFAMS HIPPMTELTY DYGVTRPSGA QNGNTLYGIR PLSISQIVED
1001: VLSCLSPVGY VM

Best Arabidopsis Sequence Match ( AT5G04940.1 )
(BLAST)

001: MERNGGHYTD KTRVLDIKPL RTLRPVFPSG NQAPPFVCAP PFGPFPPGFS SFYPFSSSQA NQHTPDLNQA QYPPQHQQPQ NPPPVYQQQP PQHASEPSLV
101: TPLRSFRSPD VSNGNAELEG STVKRRIPKK RPISRPENMN FESGINVADR ENGNRELVLS VLMRFDALRR RFAQLEDAKE AVSGIIKRPD LKSGSTCMGR
201: GVRTNTKKRP GIVPGVEIGD VFFFRFEMCL VGLHSPSMAG IDYLVVKGET EEEPIATSIV SSGYYDNDEG NPDVLIYTGQ GGNADKDKQS SDQKLERGNL
301: ALEKSLRRDS AVRVIRGLKE ASHNAKIYIY DGLYEIKESW VEKGKSGHNT FKYKLVRAPG QPPAFASWTA IQKWKTGVPS RQGLILPDMT SGVESIPVSL
401: VNEVDTDNGP AYFTYSTTVK YSESFKLMQP SFGCDCANLC KPGNLDCHCI RKNGGDFPYT GNGILVSRKP MIYECSPSCP CSTCKNKVTQ MGVKVRLEVF
501: KTANRGWGLR SWDAIRAGSF ICIYVGEAKD KSKVQQTMAN DDYTFDTTNV YNPFKWNYEP GLADEDACEE MSEESEIPLP LIISAKNVGN VARFMNHSCS
601: PNVFWQPVSY ENNSQLFVHV AFFAISHIPP MTELTYDYGV SRPSGTQNGN PLYGKRKCFC GSAYCRGSFG

Arabidopsis Description

SUVH1Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FF80]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.