Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra006226.1-P | Field mustard | nucleus | 95.69 | 96.49 |
| CDX78549 | Canola | nucleus | 96.52 | 96.36 |
| AT5G13960.1 | Thale cress | nucleus | 78.94 | 76.28 |
| VIT_14s0068g01090.t01 | Wine grape | nucleus | 56.88 | 65.33 |
| GSMUA_Achr8P00500_001 | Banana | extracellular | 28.52 | 63.0 |
| KRG94709 | Soybean | nucleus | 29.68 | 59.47 |
| KRH20251 | Soybean | nucleus, plastid | 56.22 | 51.21 |
| KRH06819 | Soybean | nucleus | 60.86 | 50.97 |
| Solyc02g094520.2.1 | Tomato | nucleus | 56.38 | 50.22 |
| Os01t0927000-01 | Rice | nucleus | 54.06 | 49.17 |
| Zm00001d042272_P003 | Maize | nucleus | 53.57 | 48.07 |
| OQU88147 | Sorghum | nucleus | 53.4 | 46.4 |
| TraesCS3D01G433900.1 | Wheat | nucleus | 52.4 | 45.8 |
| TraesCS3A01G441200.1 | Wheat | nucleus | 51.91 | 45.36 |
| TraesCS3B01G475200.1 | Wheat | nucleus | 49.42 | 45.36 |
| GSMUA_Achr8P00490_001 | Banana | nucleus | 25.37 | 42.27 |
| OQU77925 | Sorghum | nucleus | 51.74 | 41.38 |
| HORVU3Hr1G096250.8 | Barley | golgi, mitochondrion, nucleus, plastid | 52.07 | 40.99 |
| Zm00001d011956_P002 | Maize | mitochondrion, nucleus, plastid | 47.1 | 39.01 |
| CDY04931 | Canola | cytosol, extracellular, nucleus | 4.64 | 36.84 |
| TraesCS1D01G241500.1 | Wheat | nucleus | 49.92 | 36.75 |
| TraesCS1A01G241600.2 | Wheat | nucleus | 49.42 | 36.39 |
| CDY28970 | Canola | cytosol | 14.1 | 34.0 |
| CDY40566 | Canola | cytosol, plastid | 14.1 | 30.04 |
| CDY31670 | Canola | nucleus | 33.66 | 28.31 |
| CDX84255 | Canola | nucleus | 33.33 | 27.88 |
| CDX80930 | Canola | nucleus | 28.86 | 27.02 |
| CDY11319 | Canola | nucleus | 28.86 | 26.98 |
| CDY19475 | Canola | nucleus | 24.54 | 26.81 |
| CDX68245 | Canola | nucleus | 29.52 | 26.73 |
| CDY11129 | Canola | nucleus | 29.52 | 26.61 |
| CDY17156 | Canola | nucleus | 24.88 | 26.5 |
| CDX96449 | Canola | nucleus | 28.86 | 26.48 |
| CDY59935 | Canola | nucleus | 28.86 | 26.4 |
| CDY61331 | Canola | nucleus | 29.19 | 26.31 |
| CDX98805 | Canola | nucleus | 28.19 | 25.95 |
| CDY23755 | Canola | nucleus | 27.36 | 25.9 |
| CDY40567 | Canola | mitochondrion | 13.76 | 25.86 |
| CDY25627 | Canola | nucleus | 31.84 | 25.74 |
| CDX78210 | Canola | nucleus | 26.87 | 25.67 |
| CDX89510 | Canola | nucleus | 32.17 | 25.59 |
| CDX73506 | Canola | nucleus | 26.87 | 25.59 |
| CDY37735 | Canola | nucleus, plastid | 26.87 | 25.43 |
| CDY50660 | Canola | nucleus | 14.1 | 25.3 |
| CDY51752 | Canola | nucleus | 13.93 | 25.0 |
| CDX98804 | Canola | nucleus | 25.21 | 24.8 |
| CDY28971 | Canola | mitochondrion | 13.6 | 23.98 |
| CDY14135 | Canola | nucleus | 28.36 | 23.68 |
| CDX77744 | Canola | cytosol | 12.77 | 23.19 |
| CDY26218 | Canola | nucleus | 26.53 | 22.92 |
| CDY33517 | Canola | cytosol, mitochondrion, nucleus | 12.6 | 22.89 |
| CDY66122 | Canola | nucleus | 26.87 | 22.69 |
| CDY33518 | Canola | nucleus | 12.77 | 21.15 |
| CDX77745 | Canola | nucleus | 12.44 | 19.48 |
| CDY56214 | Canola | nucleus | 25.21 | 19.17 |
| CDX92067 | Canola | nucleus | 14.43 | 18.43 |
| CDX74192 | Canola | nucleus | 14.26 | 18.42 |
| CDY26221 | Canola | nucleus | 25.37 | 17.09 |
| CDX70182 | Canola | nucleus | 28.52 | 17.0 |
| CDY49341 | Canola | nucleus | 14.59 | 15.8 |
| CDY14903 | Canola | nucleus | 14.76 | 13.91 |
| CDX94744 | Canola | nucleus | 15.42 | 13.58 |
| CDY22319 | Canola | nucleus | 15.59 | 13.33 |
| CDY46064 | Canola | nucleus | 10.61 | 13.01 |
| CDX96935 | Canola | nucleus | 15.59 | 11.99 |
| CDY42922 | Canola | plasma membrane, vacuole | 14.59 | 10.63 |
| CDY01852 | Canola | plasma membrane | 25.37 | 8.24 |
| CDY62521 | Canola | nucleus | 17.74 | 7.83 |
| CDY39668 | Canola | nucleus | 17.58 | 7.76 |
| CDX92068 | Canola | mitochondrion | 0.0 | 0.0 |
| CDX89821 | Canola | cytosol | 0.0 | 0.0 |
| CDX86631 | Canola | cytosol | 0.0 | 0.0 |
| CDX74191 | Canola | mitochondrion | 0.0 | 0.0 |
| CDY53193 | Canola | mitochondrion | 0.0 | 0.0 |
| CDY49340 | Canola | cytosol | 0.0 | 0.0 |
| CDY42923 | Canola | mitochondrion | 0.0 | 0.0 |
| CDY21127 | Canola | cytosol | 0.0 | 0.0 |
| CDY15508 | Canola | mitochondrion | 0.0 | 0.0 |
| CDY18235 | Canola | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| KEGG:00310+2.1.1.43 | MapMan:12.3.3.7 | Gene3D:2.30.280.10 | GO:A0A078C0T5 | EnsemblPlants:CDX70530 | ProteinID:CDX70530 |
| ProteinID:CDX70530.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006464 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016571 | GO:GO:0016740 |
| GO:GO:0018024 | GO:GO:0019538 | GO:GO:0034968 | EnsemblPlantsGene:GSBRNA2T00140361001 | InterPro:Hist-Lys_N-MeTrfase_plant | InterPro:IPR001214 |
| InterPro:IPR003105 | InterPro:IPR003616 | InterPro:IPR007728 | InterPro:IPR025794 | InterPro:IPR036987 | PFAM:PF00856 |
| PFAM:PF02182 | PFAM:PF05033 | PFscan:PS50280 | PFscan:PS50867 | PFscan:PS50868 | PFscan:PS51015 |
| PFscan:PS51575 | PANTHER:PTHR22884 | PANTHER:PTHR22884:SF467 | InterPro:PUA-like_sf | InterPro:Post-SET_dom | InterPro:Pre-SET_dom |
| InterPro:SET_dom | SMART:SM00317 | SMART:SM00466 | SMART:SM00468 | SMART:SM00508 | InterPro:SRA-YDG_sf |
| InterPro:SRA_YDG | SUPFAM:SSF82199 | SUPFAM:SSF88697 | UniParc:UPI0004EDB7A5 | SEG:seg | : |
Description
BnaC03g06140D
Coordinates
chrLK031791:+:887903..892822
Molecular Weight (calculated)
68292.8 Da
IEP (calculated)
7.624
GRAVY (calculated)
-0.615
Length
603 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGRRKRAKS PEPKERRSSS RVQELRQKER DEKEQLARER VKFLSDQGSE LCDDAKEDDV SPNEGTLTTM RNGEDKNLDF YANEEDPHLK VRRNLRFFNT
101: QYLLMVQAKL SRPDLKGITE ASIVMKANAV LYPRKMIGDL PGIDVGHRFF SRAEMVAVGF HSHWLNGIDY MGAVEYQRDY ANYQFPLAVS IVMSGQYEDD
201: LDNADVVTYT GQGGHNLTGD KRQFKDQELV RGNLGLKNCF EHEVPVRVIR GHDCKSSYSK RVYTYDGLYT VVKYWAEKGV SGFTVYKYQL KRKEGQPELT
301: TNQVNFMYGR IPKSTSEIQG LVCEDISNGL ESKRIPATNR FTYINSLKIE PNVKIPKSST GCNCRGNCTD PKKCACARLN GGNFPYVDLN DGRLIEPRDV
401: VFECGPNCGC GPECVNRTSQ KRLRFHLEVF RSPKKGWAVR SWDFIPAGSP VCEYIGVLRR TDDVDTLTDN DYIFEIDCQQ TMQGLDGRQR RLGDVAVPTD
501: NKASESNGDE NVPEFCIDAG STGNFARFIN HSCEPNLFVQ CVLSSHQDIK LACVVLFAAD NIPPLQELTY DYGYTLDSVH GPDGKVKKLT CYCGAVNCRK
601: RLY
101: QYLLMVQAKL SRPDLKGITE ASIVMKANAV LYPRKMIGDL PGIDVGHRFF SRAEMVAVGF HSHWLNGIDY MGAVEYQRDY ANYQFPLAVS IVMSGQYEDD
201: LDNADVVTYT GQGGHNLTGD KRQFKDQELV RGNLGLKNCF EHEVPVRVIR GHDCKSSYSK RVYTYDGLYT VVKYWAEKGV SGFTVYKYQL KRKEGQPELT
301: TNQVNFMYGR IPKSTSEIQG LVCEDISNGL ESKRIPATNR FTYINSLKIE PNVKIPKSST GCNCRGNCTD PKKCACARLN GGNFPYVDLN DGRLIEPRDV
401: VFECGPNCGC GPECVNRTSQ KRLRFHLEVF RSPKKGWAVR SWDFIPAGSP VCEYIGVLRR TDDVDTLTDN DYIFEIDCQQ TMQGLDGRQR RLGDVAVPTD
501: NKASESNGDE NVPEFCIDAG STGNFARFIN HSCEPNLFVQ CVLSSHQDIK LACVVLFAAD NIPPLQELTY DYGYTLDSVH GPDGKVKKLT CYCGAVNCRK
601: RLY
001: MAGKRKRANA PDQTERRSSV RVQKVRQKAL DEKARLVQER VKLLSDRKSE ICVDDTELHE KEEENVDGSP KRRSPPKLTA MQKGKQKLSV SLNGKDVNLE
101: PHLKVTKCLR LFNKQYLLCV QAKLSRPDLK GVTEMIKAKA ILYPRKIIGD LPGIDVGHRF FSRAEMCAVG FHNHWLNGID YMSMEYEKEY SNYKLPLAVS
201: IVMSGQYEDD LDNADTVTYT GQGGHNLTGN KRQIKDQLLE RGNLALKHCC EYNVPVRVTR GHNCKSSYTK RVYTYDGLYK VEKFWAQKGV SGFTVYKYRL
301: KRLEGQPELT TDQVNFVAGR IPTSTSEIEG LVCEDISGGL EFKGIPATNR VDDSPVSPTS GFTYIKSLII EPNVIIPKSS TGCNCRGSCT DSKKCACAKL
401: NGGNFPYVDL NDGRLIESRD VVFECGPHCG CGPKCVNRTS QKRLRFNLEV FRSAKKGWAV RSWEYIPAGS PVCEYIGVVR RTADVDTISD NEYIFEIDCQ
501: QTMQGLGGRQ RRLRDVAVPM NNGVSQSSED ENAPEFCIDA GSTGNFARFI NHSCEPNLFV QCVLSSHQDI RLARVVLFAA DNISPMQELT YDYGYALDSV
601: HGPDGKVKQL ACYCGALNCR KRLY
101: PHLKVTKCLR LFNKQYLLCV QAKLSRPDLK GVTEMIKAKA ILYPRKIIGD LPGIDVGHRF FSRAEMCAVG FHNHWLNGID YMSMEYEKEY SNYKLPLAVS
201: IVMSGQYEDD LDNADTVTYT GQGGHNLTGN KRQIKDQLLE RGNLALKHCC EYNVPVRVTR GHNCKSSYTK RVYTYDGLYK VEKFWAQKGV SGFTVYKYRL
301: KRLEGQPELT TDQVNFVAGR IPTSTSEIEG LVCEDISGGL EFKGIPATNR VDDSPVSPTS GFTYIKSLII EPNVIIPKSS TGCNCRGSCT DSKKCACAKL
401: NGGNFPYVDL NDGRLIESRD VVFECGPHCG CGPKCVNRTS QKRLRFNLEV FRSAKKGWAV RSWEYIPAGS PVCEYIGVVR RTADVDTISD NEYIFEIDCQ
501: QTMQGLGGRQ RRLRDVAVPM NNGVSQSSED ENAPEFCIDA GSTGNFARFI NHSCEPNLFV QCVLSSHQDI RLARVVLFAA DNISPMQELT YDYGYALDSV
601: HGPDGKVKQL ACYCGALNCR KRLY
Arabidopsis Description
SUVH4Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZB6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.