Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY22413 | Canola | cytosol | 87.25 | 97.72 |
| AT4G38760.1 | Thale cress | cytosol | 83.39 | 83.56 |
| VIT_03s0038g01880.t01 | Wine grape | cytosol | 13.92 | 58.92 |
| Solyc11g039880.1.1 | Tomato | nucleus | 20.57 | 54.58 |
| VIT_03s0038g01920.t01 | Wine grape | plasma membrane | 35.5 | 52.48 |
| KRH29119 | Soybean | mitochondrion | 11.48 | 51.48 |
| KRH24149 | Soybean | nucleus | 48.96 | 49.03 |
| PGSC0003DMT400056702 | Potato | endoplasmic reticulum, extracellular, plastid | 1.63 | 47.76 |
| GSMUA_Achr11P... | Banana | cytosol | 12.9 | 44.56 |
| VIT_03s0038g01870.t01 | Wine grape | cytosol | 2.44 | 44.04 |
| Solyc11g039870.1.1 | Tomato | nucleus | 21.99 | 39.29 |
| TraesCS7A01G151100.1 | Wheat | plastid | 36.72 | 36.81 |
| TraesCS7B01G055100.1 | Wheat | cytosol, plasma membrane, plastid | 36.67 | 36.76 |
| TraesCS7D01G153000.1 | Wheat | cytosol, plasma membrane, plastid | 36.52 | 36.65 |
| HORVU7Hr1G031100.1 | Barley | cytosol | 36.41 | 36.53 |
| Zm00001d030340_P037 | Maize | plasma membrane | 33.06 | 36.23 |
| OQU82713 | Sorghum | plastid | 35.96 | 36.1 |
| Os10t0154566-00 | Rice | plastid | 2.89 | 35.85 |
| Zm00001d030342_P001 | Maize | plastid | 2.49 | 34.27 |
| GSMUA_Achr11P... | Banana | plasma membrane | 23.01 | 34.11 |
| Os10t0154600-01 | Rice | peroxisome, plasma membrane, plastid | 10.77 | 32.82 |
Protein Annotations
| EnsemblPlants:CDX72740 | EnsemblPlantsGene:GSBRNA2T00100339001 | GO:GO:0003674 | GO:GO:0005198 | GO:GO:0017056 | InterPro:Nucleoporin_Nup188 |
| ncoils:Coil | PANTHER:PTHR31431 | PFAM:PF10487 | ProteinID:CDX72740 | ProteinID:CDX72740.1 | SEG:seg |
| UniParc:UPI0004EDB443 | MapMan:23.5.1.1.2.2 | : | : | : | : |
Description
BnaC07g47620D
Coordinates
chrLK031796:+:2889928..2900054
Molecular Weight (calculated)
219534.0 Da
IEP (calculated)
5.548
GRAVY (calculated)
0.144
Length
1969 amino acids
Sequence
(BLAST)
(BLAST)
0001: MANPKSVDPS LWWDSFGSLL SSLENASLSD ELPQPIAEKL EENHAWFVNT LSMFKPPSGK SKDALDSDVV KIKEHRLVIK PHLKQKALRI SSHLNLDEIQ
0101: SYILVERCTE QEYGTTDSVS QDLVDMILLQ YYIERQCLLK CTKRILTHAL YTSREESTIR DAAVKLISDG LEKQQSSVLD NLFSSSFPQH MDVNLFTLWS
0201: EETLIEDNLV LDILFLLYHE SFHTCNGERW RTLCSLYKGI LLGSYSFWKL AVSAEAQHSA CRVKIQLLMI LIDTLDMENL LQMVHDGLPF RSGPCVFSII
0301: DVQEMDATIS SLNTLEVKEA GPLVLAWAVF LCLISSLPGK EEIPFLMEID HVSYVHQAFE AASLSYFLGV LQSNVLNDFD GPISGFRSVL RTFISSFIAS
0401: YEINIQLEDA NLELILEILC KVYQGEESLC SQFWDRKSSV DGPIRCLLFD LESEFPFRSV EFIRLLSSLS EGSWPAECVY NFLDKSVGIS TLFDITSDSV
0501: VDGASQFVET SQPLQIPGLE GLVIPSNTRG RILRVINENT GLVRWEYSLS GATLLIIHLA NVLYTGNNSE AFVILELVRR MVTFNKAVCF SLLNISHFFH
0601: VNESYMNEKL ESDVRVVDII CNSVRSLTFD SSGAAMMAMA IDILAKLLRC SPSNVAPMVL KANIFDMTSG PGVPDSGYNI SLSGSWSLSG KLAKMILIDC
0701: EKNDTSCPLV ISGKFVVEYC WMFLEFTMQL VEGGVENDVV LALIVFSLQY VLVSHESWKY NHGHIRWNVT LKVIEVMKTC LRFSKFSAKL KDVLLDILLN
0801: DASVHNALFR IICTTAHTLE NLRVHRFIEP AEIEGWQLSI VSVLDVLDIT LSQSSQSTDS GLPVFHQTML SSTSKPIPVV AAITSFISYF RNPTIQICAA
0901: KVLSKLYAMA ESSQLYIISK AGFGLDDKQI TDLRTSVSQI ILDPSEPNED LVIATMKLLT VAARYQPALL VALFDSSEDS DAGKLKQSDK ETSSGPELAC
1001: KSRLLHIILQ HVERATDFVN RYPDILLSLL GFLKTLWQEA GQYANLLEPF KASKRLWQEF SNIISQVSKL KDSSVGRLGK EEISKLYVKY QCQSSVLEIL
1101: ACNMFLNKKL LFAESLKKSW LEQKEKTNKA VSPSKLSLTA ASDPKDIFSK WCDVSVLDGL IQSVSSLDGE IEINVQSKVA AVLLIVHLIV KLETSGAGAL
1201: SMSLVGKIKV ISEMLCAQPA FSELLAQYSK LGYSGGKELM PMILSDLYCH LQGKLEGRDI PTGPFKELFQ FLVESGFWEK YKQSTDIDKN MALGDNILFD
1301: IQHIRTELGT AIWDFSEWKT SKATTEEMLS YMQRANSMVL ISTSQVSALH ALISVLILYE DNSLEDSVAV ERKVPARVTL SSIDEVCEKF SSRVDSLASL
1401: WDAPKIVFDI LTAQADLLSR LLKSGKKNLP SSVCALVLRN VGPGLKILGS LRHSNAILKK TVNLLLEVLL LVVGSGSDSS NSSEMGHMAA RDLAEISDAT
1501: IGLLPLLCNF MGNPEYLTLC LTTVDLILRD FLTPETWFPI IQSHLRLQHV ILQLQDKKSS ASVSAIMKFF LTIAQVHDGA QMLLNSGFFS TLRALFIDLP
1601: DGISTLVSDD EKGGLLDKKE KPQHMWGLGL AVVTAIVNSL GSVSVGADIV ESVISYFFSE KGYMISYYLS APDFPSDDRE KVRARTQRTW TSLAYLRETE
1701: HTLLLMCALA SHWRSWVKIM KEMDSPLREM AIHLLAFISK GAQRLRESHI ITSHLLCPPV VKEEFDSCKR QSVINSKHGW FALVPLVCVG KPKLGAVSIS
1801: TALVVRGQTT EQPGSVPQSH FTDSVAVQIY RVASLLLNFL CLQAEGVVKR ADEVGYVDLA HFPELPEPEI LHGLQDQATA IVAELCDNYK EVPNEVKKLC
1901: LLLLQITEKS LYLELCVVQV CRIHQVFGRV DNFSKDFKKL VKAAEAHAYL EPSMDSLKKI AVFLYPGLL
0101: SYILVERCTE QEYGTTDSVS QDLVDMILLQ YYIERQCLLK CTKRILTHAL YTSREESTIR DAAVKLISDG LEKQQSSVLD NLFSSSFPQH MDVNLFTLWS
0201: EETLIEDNLV LDILFLLYHE SFHTCNGERW RTLCSLYKGI LLGSYSFWKL AVSAEAQHSA CRVKIQLLMI LIDTLDMENL LQMVHDGLPF RSGPCVFSII
0301: DVQEMDATIS SLNTLEVKEA GPLVLAWAVF LCLISSLPGK EEIPFLMEID HVSYVHQAFE AASLSYFLGV LQSNVLNDFD GPISGFRSVL RTFISSFIAS
0401: YEINIQLEDA NLELILEILC KVYQGEESLC SQFWDRKSSV DGPIRCLLFD LESEFPFRSV EFIRLLSSLS EGSWPAECVY NFLDKSVGIS TLFDITSDSV
0501: VDGASQFVET SQPLQIPGLE GLVIPSNTRG RILRVINENT GLVRWEYSLS GATLLIIHLA NVLYTGNNSE AFVILELVRR MVTFNKAVCF SLLNISHFFH
0601: VNESYMNEKL ESDVRVVDII CNSVRSLTFD SSGAAMMAMA IDILAKLLRC SPSNVAPMVL KANIFDMTSG PGVPDSGYNI SLSGSWSLSG KLAKMILIDC
0701: EKNDTSCPLV ISGKFVVEYC WMFLEFTMQL VEGGVENDVV LALIVFSLQY VLVSHESWKY NHGHIRWNVT LKVIEVMKTC LRFSKFSAKL KDVLLDILLN
0801: DASVHNALFR IICTTAHTLE NLRVHRFIEP AEIEGWQLSI VSVLDVLDIT LSQSSQSTDS GLPVFHQTML SSTSKPIPVV AAITSFISYF RNPTIQICAA
0901: KVLSKLYAMA ESSQLYIISK AGFGLDDKQI TDLRTSVSQI ILDPSEPNED LVIATMKLLT VAARYQPALL VALFDSSEDS DAGKLKQSDK ETSSGPELAC
1001: KSRLLHIILQ HVERATDFVN RYPDILLSLL GFLKTLWQEA GQYANLLEPF KASKRLWQEF SNIISQVSKL KDSSVGRLGK EEISKLYVKY QCQSSVLEIL
1101: ACNMFLNKKL LFAESLKKSW LEQKEKTNKA VSPSKLSLTA ASDPKDIFSK WCDVSVLDGL IQSVSSLDGE IEINVQSKVA AVLLIVHLIV KLETSGAGAL
1201: SMSLVGKIKV ISEMLCAQPA FSELLAQYSK LGYSGGKELM PMILSDLYCH LQGKLEGRDI PTGPFKELFQ FLVESGFWEK YKQSTDIDKN MALGDNILFD
1301: IQHIRTELGT AIWDFSEWKT SKATTEEMLS YMQRANSMVL ISTSQVSALH ALISVLILYE DNSLEDSVAV ERKVPARVTL SSIDEVCEKF SSRVDSLASL
1401: WDAPKIVFDI LTAQADLLSR LLKSGKKNLP SSVCALVLRN VGPGLKILGS LRHSNAILKK TVNLLLEVLL LVVGSGSDSS NSSEMGHMAA RDLAEISDAT
1501: IGLLPLLCNF MGNPEYLTLC LTTVDLILRD FLTPETWFPI IQSHLRLQHV ILQLQDKKSS ASVSAIMKFF LTIAQVHDGA QMLLNSGFFS TLRALFIDLP
1601: DGISTLVSDD EKGGLLDKKE KPQHMWGLGL AVVTAIVNSL GSVSVGADIV ESVISYFFSE KGYMISYYLS APDFPSDDRE KVRARTQRTW TSLAYLRETE
1701: HTLLLMCALA SHWRSWVKIM KEMDSPLREM AIHLLAFISK GAQRLRESHI ITSHLLCPPV VKEEFDSCKR QSVINSKHGW FALVPLVCVG KPKLGAVSIS
1801: TALVVRGQTT EQPGSVPQSH FTDSVAVQIY RVASLLLNFL CLQAEGVVKR ADEVGYVDLA HFPELPEPEI LHGLQDQATA IVAELCDNYK EVPNEVKKLC
1901: LLLLQITEKS LYLELCVVQV CRIHQVFGRV DNFSKDFKKL VKAAEAHAYL EPSMDSLKKI AVFLYPGLL
0001: MANPNSVDSS LWWDPFDSLL TDLENASLSD DLPQPIAKKL EENHAWFVGT LSMFKPPSEK SKEALNSDLV KIKEHQLVIK PQLKDKALRI SSHLNLDEIQ
0101: SYILVERSME QEYGTTDSVA QELTQEFIDM ILLQYYIQRQ CLLKCTKRIL IHALYAPREE SSIKEEAVKL ISDGLERRQS SVLEDLLSSC FPKNMDVNLF
0201: TLWAEETLIE DNLILDILFL IYNESYCSCN GERWRKLCSF YKGILSGSYN FSKLAVSVEA QHSACRVQIQ LLMILIETLD MENLLQMVHD GVPFRSGTCV
0301: FSIVDVQEMD ATISSLNTSE VNEAGPLVLA WAVFLCLISS LPGKEESPFL MDIDHVSYVH QAFEAASLSY FLEILQSNLL NDFDGPISGH RSVVRTFISA
0401: FIASYEINLQ LEDGTLELIL DILSKVYQGE ESLCCQFWDR KSFVDGPIRC LLFDLESEFP FRSAEFIRLL SSLSEGSWPA ECVYNFLDKS VGVSTLFDIT
0501: SDSPADDASQ LVETSRPLHI PGLEGLVIPS NTRGRILRVI SENTVLVRWE YSLSGIIVLI IRLANKLYIG NNREAFVTLE LLRRMVTFNK AVCFSLLNIS
0601: HFFYVQESYV NGKMESDVRV VDIICNSVRS LTFDSGGAAV MAMAIDILAK LLRCSPSSVA PMVLKSNIFD MTSCSDVPDS GYNISLSGSW SLSGKLAKMI
0701: LIDCEKNDTS CPLVISVLEF TMQLVEGGLE NDVVFALVVF SLQYILASHE YWKYNHGNMR WKVTLKVIEL MKTCLRFSKF STKLRDVLLD ILLNDASVHS
0801: ALFRIICTTT QNLENLCSSR FIEPAEIEGW QLAIVSVLDV LNVILSQFSE STHSGLPVFH QAMLSSTTKP ISVVAAITSL ISYFRNPTIQ VCAAQVLSKL
0901: FALAESSQLY IISNAGFGLD NKQITDLRNS VTQIVLDLSG QNEHLVVATL KLLTVAARFQ PALLVAIFDS DEDSDSSNVK QSRKDASSIP DWACKSRLLH
1001: TILQYVERAT DFVDRHTDIL LGLLDFLKTL WQEAGQYANM LEPFKASKKL WQEFSDIISQ ASKIKDSTVG SLGKEEISKL LVKYQCQASV LEIMACNMFL
1101: YKKLLFAESL KKPCVETKKT ASNGVSPPKL TWTADSDPKD IFSKWCDISV LDGIIQSVSS LDGESEINFQ AKVAAVLLIV HLIVKLETSG AGALSMVLVE
1201: KIKLISETLC AQPAFSELLA QYSKLGYSGG KELMPMIFSD LYCHLQGKLE GRDIPTGPFK ELFQFLVETS FWEKYKQKTN KDVNMALGDC LFDTQQIQTE
1301: LGIDIWDFSE WKTSKTTAEE MLNYMQRANS MVLLSTSQLS VLHALISVLI LYEDNSLEES AAAERKIPSR VTLLSIDKVC RKFCTTVDSL ASLWDAPKIV
1401: FDILTAQADL LSRLLKSAKK NLSLSVCALV LRNVGPGLKI LGSLRHSNAI LKKTINLLLE VLLLVVGFGS DNSNSSGMGH MVLAKDFAEI SDATIGLLPL
1501: LCNFMGNPEY LTLCLTTVDL ILRNFLTPET WFPIIQSQLR LQHVILQLQD KKSTTSVSAI LKFFLTIAQV HGGAQMLLNS GFFSTLRALL MEFPDGMSTL
1601: VSDNEKGSLL EKTEKTQHIW GIGLAVVTAM VHSLGSVSAG ADIVESVISY FFLEKGYMIS YYLAAPDFPS DDRDKVRLRS QRTWTSLAYL RVTEHTLLLL
1701: CALASHWRSW VKIMKDMDSP LREMTIHLLA FISKGAQRLR ESQSHISHLL CPPVAKEEFD SCKRPSFINT KHGWFSLAPL VCVGKPKITA VSISTALVVR
1801: GDTTEHPGSV PQSQFSDSVA IQIYRVASLL LKFLCLQAEG VVTRAEEVGY VDIAHFPELP EPEILHGLQD QATAIVAELC DNYKSKEIPD EVKKLCLMLI
1901: QTTEMSLYLE LCVVQVCRIH PVFGRVDNFS KDLKKLVKAA EVHTYLEPSI DSLKKIAAFL YPGSL
0101: SYILVERSME QEYGTTDSVA QELTQEFIDM ILLQYYIQRQ CLLKCTKRIL IHALYAPREE SSIKEEAVKL ISDGLERRQS SVLEDLLSSC FPKNMDVNLF
0201: TLWAEETLIE DNLILDILFL IYNESYCSCN GERWRKLCSF YKGILSGSYN FSKLAVSVEA QHSACRVQIQ LLMILIETLD MENLLQMVHD GVPFRSGTCV
0301: FSIVDVQEMD ATISSLNTSE VNEAGPLVLA WAVFLCLISS LPGKEESPFL MDIDHVSYVH QAFEAASLSY FLEILQSNLL NDFDGPISGH RSVVRTFISA
0401: FIASYEINLQ LEDGTLELIL DILSKVYQGE ESLCCQFWDR KSFVDGPIRC LLFDLESEFP FRSAEFIRLL SSLSEGSWPA ECVYNFLDKS VGVSTLFDIT
0501: SDSPADDASQ LVETSRPLHI PGLEGLVIPS NTRGRILRVI SENTVLVRWE YSLSGIIVLI IRLANKLYIG NNREAFVTLE LLRRMVTFNK AVCFSLLNIS
0601: HFFYVQESYV NGKMESDVRV VDIICNSVRS LTFDSGGAAV MAMAIDILAK LLRCSPSSVA PMVLKSNIFD MTSCSDVPDS GYNISLSGSW SLSGKLAKMI
0701: LIDCEKNDTS CPLVISVLEF TMQLVEGGLE NDVVFALVVF SLQYILASHE YWKYNHGNMR WKVTLKVIEL MKTCLRFSKF STKLRDVLLD ILLNDASVHS
0801: ALFRIICTTT QNLENLCSSR FIEPAEIEGW QLAIVSVLDV LNVILSQFSE STHSGLPVFH QAMLSSTTKP ISVVAAITSL ISYFRNPTIQ VCAAQVLSKL
0901: FALAESSQLY IISNAGFGLD NKQITDLRNS VTQIVLDLSG QNEHLVVATL KLLTVAARFQ PALLVAIFDS DEDSDSSNVK QSRKDASSIP DWACKSRLLH
1001: TILQYVERAT DFVDRHTDIL LGLLDFLKTL WQEAGQYANM LEPFKASKKL WQEFSDIISQ ASKIKDSTVG SLGKEEISKL LVKYQCQASV LEIMACNMFL
1101: YKKLLFAESL KKPCVETKKT ASNGVSPPKL TWTADSDPKD IFSKWCDISV LDGIIQSVSS LDGESEINFQ AKVAAVLLIV HLIVKLETSG AGALSMVLVE
1201: KIKLISETLC AQPAFSELLA QYSKLGYSGG KELMPMIFSD LYCHLQGKLE GRDIPTGPFK ELFQFLVETS FWEKYKQKTN KDVNMALGDC LFDTQQIQTE
1301: LGIDIWDFSE WKTSKTTAEE MLNYMQRANS MVLLSTSQLS VLHALISVLI LYEDNSLEES AAAERKIPSR VTLLSIDKVC RKFCTTVDSL ASLWDAPKIV
1401: FDILTAQADL LSRLLKSAKK NLSLSVCALV LRNVGPGLKI LGSLRHSNAI LKKTINLLLE VLLLVVGFGS DNSNSSGMGH MVLAKDFAEI SDATIGLLPL
1501: LCNFMGNPEY LTLCLTTVDL ILRNFLTPET WFPIIQSQLR LQHVILQLQD KKSTTSVSAI LKFFLTIAQV HGGAQMLLNS GFFSTLRALL MEFPDGMSTL
1601: VSDNEKGSLL EKTEKTQHIW GIGLAVVTAM VHSLGSVSAG ADIVESVISY FFLEKGYMIS YYLAAPDFPS DDRDKVRLRS QRTWTSLAYL RVTEHTLLLL
1701: CALASHWRSW VKIMKDMDSP LREMTIHLLA FISKGAQRLR ESQSHISHLL CPPVAKEEFD SCKRPSFINT KHGWFSLAPL VCVGKPKITA VSISTALVVR
1801: GDTTEHPGSV PQSQFSDSVA IQIYRVASLL LKFLCLQAEG VVTRAEEVGY VDIAHFPELP EPEILHGLQD QATAIVAELC DNYKSKEIPD EVKKLCLMLI
1901: QTTEMSLYLE LCVVQVCRIH PVFGRVDNFS KDLKKLVKAA EVHTYLEPSI DSLKKIAAFL YPGSL
Arabidopsis Description
Protein of unknown function (DUF3414) [Source:TAIR;Acc:AT4G38760]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.