CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX92067	Canola	nucleus	93.58	92.58
CDY49341	Canola	nucleus	82.23	68.94
CDY42922	Canola	plasma membrane, vacuole	83.3	46.98
CDY04931	Canola	cytosol, extracellular, nucleus	5.35	32.89
CDY14903	Canola	nucleus	39.19	28.59
CDX94744	Canola	nucleus	38.76	26.42
CDY22319	Canola	nucleus	38.76	25.67
CDX96935	Canola	nucleus	39.4	23.47
CDY50660	Canola	nucleus	16.49	22.92
CDY51752	Canola	nucleus	16.06	22.32
CDX68245	Canola	nucleus	21.63	15.17
CDY11129	Canola	nucleus	21.63	15.1
CDY61331	Canola	nucleus	21.41	14.95
CDX96449	Canola	nucleus	20.34	14.46
CDY59935	Canola	nucleus	20.34	14.42
CDX70530	Canola	nucleus	18.42	14.26
CDX80930	Canola	nucleus	19.49	14.13
CDY11319	Canola	nucleus	19.49	14.11
CDX78549	Canola	nucleus	18.2	14.07
CDX98805	Canola	nucleus	19.27	13.74
CDX98804	Canola	nucleus	17.34	13.21
CDY31670	Canola	nucleus	19.7	12.83
CDX84255	Canola	nucleus	19.49	12.62
CDY46064	Canola	nucleus	13.28	12.6
CDX78210	Canola	nucleus	16.92	12.52
CDX73506	Canola	nucleus	16.92	12.48
CDY14135	Canola	nucleus	18.84	12.19
CDX89510	Canola	nucleus	19.7	12.14
CDY25627	Canola	nucleus	19.27	12.06
CDY19475	Canola	nucleus	14.13	11.96
CDY26218	Canola	nucleus	17.56	11.75
CDY66122	Canola	nucleus	17.56	11.48
CDY17156	Canola	nucleus	13.7	11.31
CDY37735	Canola	nucleus, plastid	15.2	11.15
CDY23755	Canola	nucleus	14.99	10.99
CDY56214	Canola	nucleus	17.13	10.09
CDY26221	Canola	nucleus	16.27	8.49
CDX70182	Canola	nucleus	17.99	8.3
CDY62521	Canola	nucleus	22.27	7.61
CDY39668	Canola	nucleus	21.84	7.47
CDY01852	Canola	plasma membrane	16.49	4.15
CDX86631	Canola	cytosol	0.64	3.7
CDY21127	Canola	cytosol	0.64	3.7
CDX89821	Canola	cytosol	0.64	3.7
CDY49340	Canola	cytosol	0.64	3.7
CDX74191	Canola	mitochondrion	1.07	3.57
CDY53193	Canola	mitochondrion	1.07	3.57
CDY18235	Canola	mitochondrion	1.07	3.57
CDY42923	Canola	mitochondrion	1.07	3.57
CDY15508	Canola	mitochondrion	1.07	3.57
CDX92068	Canola	mitochondrion	1.07	3.57
TraesCS5D01G192900.1	Wheat	cytosol	1.07	3.07
CDX77745	Canola	nucleus	1.5	1.82
CDY33518	Canola	nucleus	1.28	1.65
CDX77744	Canola	cytosol	0.86	1.2
CDY33517	Canola	cytosol, mitochondrion, nucleus	0.86	1.2
CDY28970	Canola	cytosol	0.64	1.2
CDY40566	Canola	cytosol, plastid	0.64	1.06
CDY40567	Canola	mitochondrion	0.64	0.93
CDY28971	Canola	mitochondrion	0.64	0.88

Protein Annotations

KEGG:00310+2.1.1.43	Gene3D:1.10.8.850	MapMan:12.3.3.7	GO:A0A078CBG3	EnsemblPlants:CDX74192	ProteinID:CDX74192
ProteinID:CDX74192.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0008270	GO:GO:0009987	GO:GO:0016043	GO:GO:0016740	GO:GO:0018024	GO:GO:0019538
GO:GO:0034968	EnsemblPlantsGene:GSBRNA2T00111957001	InterPro:IPR001214	InterPro:IPR007728	InterPro:IPR025776	PFAM:PF00856
PFAM:PF05033	PFAM:PF10440	PFscan:PS50280	PFscan:PS50867	PFscan:PS51580	PANTHER:PTHR22884
PANTHER:PTHR22884:SF460	InterPro:Pre-SET_dom	InterPro:SET_dom	SMART:SM00317	SMART:SM00468	SUPFAM:SSF82199
InterPro:SUVR4/1/2	UniParc:UPI0004EE4391	InterPro:WIYLD_domain	:	:	:

Description

BnaA03g28550D

Coordinates

chrLK031800:-:1719131..1722406

Molecular Weight (calculated)

53394.6 Da

IEP (calculated)

7.761

GRAVY (calculated)

-0.622

Length

467 amino acids

Sequence
(BLAST)

001: MQPMLLNDER VRRACEKTRE LKIPDEKTLL VLRKLLRENG ENWGIIRLDN YTALIDAIYS LDEENETPSN NNRGKSAAKN VNPPATLKTI YETRFATSSS
101: SVEEAHKQQQ TSNGVRKRKY KTIIHDITKG SESVEISLVD DVGTEKLPTF TYIPHNIVYQ SAYVHVSLAR ISDDDCCASC KGDCLSADFP CACARETSGE
201: YAYTREGLLK EEFLDTCLKM KKAPDTFNKF YCQDCPLERD HGKCQGHLIR KFVKECWRKC GCDMLCGNRV VQRGIRCQLQ VYFTSEGKGW GVRALKDLPK
301: GTFVYEYIGE ILTNTELYER NLRLSSERHT YPVTLDADWG SEKDLKDEEA LCLDATICGN VARFVNHRCG DANLIDIPVQ IETPDRHYYH IAFFTIRDVK
401: AMEELTWDYM IDFSDESHPV KAFRCNCGSE LCRDKKPIGS RGKSGERRKV VHAKKQPDTK GVPLKRK

Best Arabidopsis Sequence Match ( AT3G04380.1 )
(BLAST)

001: MISLSGLTSS VESDLDMQQA MLTNKDEKVL KALERTRQLD IPDEKTMPVL MKLLEEAGGN WSYIKLDNYT ALVDAIYSVE DENKQSEGSS NGNRGKNLKV
101: IDSPATLKKT YETRSASSGS SIQVVQKQPQ LSNGDRKRKY KSRIADITKG SESVKIPLVD DVGSEAVPKF TYIPHNIVYQ SAYLHVSLAR ISDEDCCANC
201: KGNCLSADFP CTCARETSGE YAYTKEGLLK EKFLDTCLKM KKEPDSFPKV YCKDCPLERD HDKGTYGKCD GHLIRKFIKE CWRKCGCDMQ CGNRVVQRGI
301: RCQLQVYFTQ EGKGWGLRTL QDLPKGTFIC EYIGEILTNT ELYDRNVRSS SERHTYPVTL DADWGSEKDL KDEEALCLDA TICGNVARFI NHRCEDANMI
401: DIPIEIETPD RHYYHIAFFT LRDVKAMDEL TWDYMIDFND KSHPVKAFRC CCGSESCRDR KIKGSQGKSI ERRKIVSAKK QQGSKEVSKK RK

Arabidopsis Description

SUVR4Histone-lysine N-methyltransferase SUVR4 [Source:UniProtKB/Swiss-Prot;Acc:Q8W595]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.