CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 5
cytosol 1
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX68996	Canola	plastid	97.59	97.59
Bra011460.1-P	Field mustard	plastid	95.18	96.34
AT4G33666.1	Thale cress	plastid	65.06	68.35
CDY07421	Canola	plastid	42.17	46.05
CDY28885	Canola	plastid	40.96	44.74

Protein Annotations

EnsemblPlants:CDX75372	EnsemblPlantsGene:GSBRNA2T00121254001	ProteinID:AID60090.1	ProteinID:CDX75372	ProteinID:CDX75372.1	SEG:seg
UniParc:UPI0004A888FE	UniProt:A0A068F4X7	MapMan:35.2	:	:	:

Description

BnaA01g03300DAt4g33666-like protein [Source:UniProtKB/TrEMBL;Acc:A0A068F4X7]

Coordinates

chrLK031804:+:838712..839107

Molecular Weight (calculated)

9246.1 Da

IEP (calculated)

8.242

GRAVY (calculated)

-0.273

Length

83 amino acids

Sequence
(BLAST)

1: MAPLAAMFML SPPLIPQLPT TTTTHNNLQP QPEPSLPVVR CHLPARSSSE SSESSRSKFM LWLFGDPATY DKRFQRAIEL SCS

Best Arabidopsis Sequence Match ( AT4G33666.1 )
(BLAST)

1: MASSAAMFML PLPLTQQITT NNTLQTTATP EPSASIVKCL FPARNSSESS ARSKFSLWLF GNPATYDKRF QEAIELSCL

Arabidopsis Description

Uncharacterized protein At4g33666 [Source:UniProtKB/TrEMBL;Acc:Q94AJ7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.