Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra006226.1-P | Field mustard | nucleus | 99.01 | 100.0 |
| CDX70530 | Canola | nucleus | 96.36 | 96.52 |
| AT5G13960.1 | Thale cress | nucleus | 77.98 | 75.48 |
| VIT_14s0068g01090.t01 | Wine grape | nucleus | 56.62 | 65.14 |
| GSMUA_Achr8P00500_001 | Banana | extracellular | 28.31 | 62.64 |
| KRG94709 | Soybean | nucleus | 29.64 | 59.47 |
| KRH20251 | Soybean | nucleus, plastid | 55.79 | 50.91 |
| KRH06819 | Soybean | nucleus | 60.6 | 50.83 |
| Solyc02g094520.2.1 | Tomato | nucleus | 56.13 | 50.07 |
| Os01t0927000-01 | Rice | nucleus | 53.48 | 48.72 |
| Zm00001d042272_P003 | Maize | nucleus | 53.15 | 47.77 |
| OQU88147 | Sorghum | nucleus | 53.15 | 46.25 |
| TraesCS3D01G433900.1 | Wheat | nucleus | 52.15 | 45.65 |
| TraesCS3A01G441200.1 | Wheat | nucleus | 51.99 | 45.51 |
| TraesCS3B01G475200.1 | Wheat | nucleus | 49.01 | 45.05 |
| GSMUA_Achr8P00490_001 | Banana | nucleus | 25.17 | 41.99 |
| OQU77925 | Sorghum | nucleus | 51.49 | 41.25 |
| HORVU3Hr1G096250.8 | Barley | golgi, mitochondrion, nucleus, plastid | 51.82 | 40.86 |
| Zm00001d011956_P002 | Maize | mitochondrion, nucleus, plastid | 46.69 | 38.74 |
| TraesCS1D01G241500.1 | Wheat | nucleus | 50.0 | 36.87 |
| CDY04931 | Canola | cytosol, extracellular, nucleus | 4.64 | 36.84 |
| TraesCS1A01G241600.2 | Wheat | nucleus | 49.5 | 36.51 |
| CDY28970 | Canola | cytosol | 14.07 | 34.0 |
| CDY40566 | Canola | cytosol, plastid | 14.07 | 30.04 |
| CDY31670 | Canola | nucleus | 34.11 | 28.73 |
| CDX84255 | Canola | nucleus | 33.61 | 28.16 |
| CDY19475 | Canola | nucleus | 25.17 | 27.54 |
| CDX68245 | Canola | nucleus | 29.8 | 27.03 |
| CDY11129 | Canola | nucleus | 29.8 | 26.91 |
| CDX80930 | Canola | nucleus | 28.64 | 26.86 |
| CDY17156 | Canola | nucleus | 25.17 | 26.86 |
| CDY11319 | Canola | nucleus | 28.64 | 26.82 |
| CDY59935 | Canola | nucleus | 29.14 | 26.71 |
| CDX96449 | Canola | nucleus | 28.97 | 26.64 |
| CDY61331 | Canola | nucleus | 29.47 | 26.61 |
| CDX78210 | Canola | nucleus | 27.65 | 26.47 |
| CDX73506 | Canola | nucleus | 27.65 | 26.38 |
| CDY23755 | Canola | nucleus | 27.48 | 26.06 |
| CDX98805 | Canola | nucleus | 28.15 | 25.95 |
| CDY40567 | Canola | mitochondrion | 13.74 | 25.86 |
| CDY37735 | Canola | nucleus, plastid | 27.15 | 25.75 |
| CDY25627 | Canola | nucleus | 31.79 | 25.74 |
| CDY50660 | Canola | nucleus | 14.24 | 25.6 |
| CDX89510 | Canola | nucleus | 32.12 | 25.59 |
| CDY51752 | Canola | nucleus | 14.07 | 25.3 |
| CDX98804 | Canola | nucleus | 25.0 | 24.63 |
| CDY28971 | Canola | mitochondrion | 13.58 | 23.98 |
| CDY14135 | Canola | nucleus | 28.15 | 23.55 |
| CDY26218 | Canola | nucleus | 26.99 | 23.35 |
| CDX77744 | Canola | cytosol | 12.75 | 23.19 |
| CDY33517 | Canola | cytosol, mitochondrion, nucleus | 12.58 | 22.89 |
| CDY66122 | Canola | nucleus | 26.99 | 22.83 |
| CDY33518 | Canola | nucleus | 12.58 | 20.88 |
| CDY56214 | Canola | nucleus | 25.5 | 19.42 |
| CDX77745 | Canola | nucleus | 12.25 | 19.22 |
| CDX92067 | Canola | nucleus | 14.24 | 18.22 |
| CDX74192 | Canola | nucleus | 14.07 | 18.2 |
| CDY26221 | Canola | nucleus | 25.83 | 17.43 |
| CDX70182 | Canola | nucleus | 28.15 | 16.8 |
| CDY49341 | Canola | nucleus | 14.4 | 15.62 |
| CDY14903 | Canola | nucleus | 14.74 | 13.91 |
| CDX94744 | Canola | nucleus | 15.23 | 13.43 |
| CDY46064 | Canola | nucleus | 10.76 | 13.21 |
| CDY22319 | Canola | nucleus | 15.4 | 13.19 |
| CDX96935 | Canola | nucleus | 15.56 | 11.99 |
| CDY42922 | Canola | plasma membrane, vacuole | 14.4 | 10.51 |
| CDY01852 | Canola | plasma membrane | 25.66 | 8.35 |
| CDY62521 | Canola | nucleus | 17.88 | 7.91 |
| CDY39668 | Canola | nucleus | 17.72 | 7.83 |
| CDY21127 | Canola | cytosol | 0.0 | 0.0 |
| CDY53193 | Canola | mitochondrion | 0.0 | 0.0 |
| CDY49340 | Canola | cytosol | 0.0 | 0.0 |
| CDX74191 | Canola | mitochondrion | 0.0 | 0.0 |
| CDY18235 | Canola | mitochondrion | 0.0 | 0.0 |
| CDY42923 | Canola | mitochondrion | 0.0 | 0.0 |
| CDX92068 | Canola | mitochondrion | 0.0 | 0.0 |
| CDX89821 | Canola | cytosol | 0.0 | 0.0 |
| CDX86631 | Canola | cytosol | 0.0 | 0.0 |
| CDY15508 | Canola | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| KEGG:00310+2.1.1.43 | MapMan:12.3.3.7 | Gene3D:2.30.280.10 | GO:A0A078CR79 | EnsemblPlants:CDX78549 | ProteinID:CDX78549 |
| ProteinID:CDX78549.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006464 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016571 | GO:GO:0016740 |
| GO:GO:0018024 | GO:GO:0019538 | GO:GO:0034968 | EnsemblPlantsGene:GSBRNA2T00129954001 | InterPro:Hist-Lys_N-MeTrfase_plant | InterPro:IPR001214 |
| InterPro:IPR003105 | InterPro:IPR003616 | InterPro:IPR007728 | InterPro:IPR025794 | InterPro:IPR036987 | PFAM:PF00856 |
| PFAM:PF02182 | PFAM:PF05033 | PFscan:PS50280 | PFscan:PS50867 | PFscan:PS50868 | PFscan:PS51015 |
| PFscan:PS51575 | PANTHER:PTHR22884 | PANTHER:PTHR22884:SF467 | InterPro:PUA-like_sf | InterPro:Post-SET_dom | InterPro:Pre-SET_dom |
| InterPro:SET_dom | SMART:SM00317 | SMART:SM00466 | SMART:SM00468 | SMART:SM00508 | InterPro:SRA-YDG_sf |
| InterPro:SRA_YDG | SUPFAM:SSF82199 | SUPFAM:SSF88697 | UniParc:UPI0004EEB843 | SEG:seg | : |
Description
BnaA03g04610D
Coordinates
chrLK031815:+:1256007..1260015
Molecular Weight (calculated)
68188.7 Da
IEP (calculated)
7.883
GRAVY (calculated)
-0.594
Length
604 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGRRKRAKS PEEPKERRLS SRVQELRQKE RDEKEQLARE RVKFLSDQSS ELCDDAKEDD VSTNEGTLIT MRNGNDNNLD FYGSEEDPHL KVRRNLRFFN
101: TQYLLMVQGK MSRPDLKGVT EASIVMKANA VLYPRKMIGD LPGIDVGHRF FSRAEMVAVG FHSHWLNGID YMGAAEYQRD YAAYQFPLAV SIVMSGQYED
201: DLDNADVVTY TGQGGHNLTG DKRQFKDQEL VRGNLGLKNC FEHGVSVRVI RGHNCKSSYS KRVYTYDGLY TVVKYWAEKG VSGFTVYKYQ LKRKEGQPEL
301: TTNQVNFMYG RIPKSTSEIQ GLVCEDISNG LESKRIPATN RFTYINSLKI EPNVKIPKSS AGCNCRGGCT DSKKCACARL NGGNFPYVDL NDGRLIEPRD
401: VVFECGPNCG CGPECVNRTS QKRLRFHLEV FRSPKKGWAV RSWDFIPAGS PVCEYIGVLR RTDDVDTLTD NDYIFEIDCQ QTMQGLDGRQ RRLGDVAVPT
501: DNKASESNGD ESVPEFCIDA GSTGNFARFI NHSCEPNLFV QCVLSSHQDI KLARVVLFAA DNIPPLQELT YDYGYTLDSV HGPDGKVKKL TCYCGAVNCR
601: KRLY
101: TQYLLMVQGK MSRPDLKGVT EASIVMKANA VLYPRKMIGD LPGIDVGHRF FSRAEMVAVG FHSHWLNGID YMGAAEYQRD YAAYQFPLAV SIVMSGQYED
201: DLDNADVVTY TGQGGHNLTG DKRQFKDQEL VRGNLGLKNC FEHGVSVRVI RGHNCKSSYS KRVYTYDGLY TVVKYWAEKG VSGFTVYKYQ LKRKEGQPEL
301: TTNQVNFMYG RIPKSTSEIQ GLVCEDISNG LESKRIPATN RFTYINSLKI EPNVKIPKSS AGCNCRGGCT DSKKCACARL NGGNFPYVDL NDGRLIEPRD
401: VVFECGPNCG CGPECVNRTS QKRLRFHLEV FRSPKKGWAV RSWDFIPAGS PVCEYIGVLR RTDDVDTLTD NDYIFEIDCQ QTMQGLDGRQ RRLGDVAVPT
501: DNKASESNGD ESVPEFCIDA GSTGNFARFI NHSCEPNLFV QCVLSSHQDI KLARVVLFAA DNIPPLQELT YDYGYTLDSV HGPDGKVKKL TCYCGAVNCR
601: KRLY
001: MAGKRKRANA PDQTERRSSV RVQKVRQKAL DEKARLVQER VKLLSDRKSE ICVDDTELHE KEEENVDGSP KRRSPPKLTA MQKGKQKLSV SLNGKDVNLE
101: PHLKVTKCLR LFNKQYLLCV QAKLSRPDLK GVTEMIKAKA ILYPRKIIGD LPGIDVGHRF FSRAEMCAVG FHNHWLNGID YMSMEYEKEY SNYKLPLAVS
201: IVMSGQYEDD LDNADTVTYT GQGGHNLTGN KRQIKDQLLE RGNLALKHCC EYNVPVRVTR GHNCKSSYTK RVYTYDGLYK VEKFWAQKGV SGFTVYKYRL
301: KRLEGQPELT TDQVNFVAGR IPTSTSEIEG LVCEDISGGL EFKGIPATNR VDDSPVSPTS GFTYIKSLII EPNVIIPKSS TGCNCRGSCT DSKKCACAKL
401: NGGNFPYVDL NDGRLIESRD VVFECGPHCG CGPKCVNRTS QKRLRFNLEV FRSAKKGWAV RSWEYIPAGS PVCEYIGVVR RTADVDTISD NEYIFEIDCQ
501: QTMQGLGGRQ RRLRDVAVPM NNGVSQSSED ENAPEFCIDA GSTGNFARFI NHSCEPNLFV QCVLSSHQDI RLARVVLFAA DNISPMQELT YDYGYALDSV
601: HGPDGKVKQL ACYCGALNCR KRLY
101: PHLKVTKCLR LFNKQYLLCV QAKLSRPDLK GVTEMIKAKA ILYPRKIIGD LPGIDVGHRF FSRAEMCAVG FHNHWLNGID YMSMEYEKEY SNYKLPLAVS
201: IVMSGQYEDD LDNADTVTYT GQGGHNLTGN KRQIKDQLLE RGNLALKHCC EYNVPVRVTR GHNCKSSYTK RVYTYDGLYK VEKFWAQKGV SGFTVYKYRL
301: KRLEGQPELT TDQVNFVAGR IPTSTSEIEG LVCEDISGGL EFKGIPATNR VDDSPVSPTS GFTYIKSLII EPNVIIPKSS TGCNCRGSCT DSKKCACAKL
401: NGGNFPYVDL NDGRLIESRD VVFECGPHCG CGPKCVNRTS QKRLRFNLEV FRSAKKGWAV RSWEYIPAGS PVCEYIGVVR RTADVDTISD NEYIFEIDCQ
501: QTMQGLGGRQ RRLRDVAVPM NNGVSQSSED ENAPEFCIDA GSTGNFARFI NHSCEPNLFV QCVLSSHQDI RLARVVLFAA DNISPMQELT YDYGYALDSV
601: HGPDGKVKQL ACYCGALNCR KRLY
Arabidopsis Description
SUVH4Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZB6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.