Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- plasma membrane 6
- extracellular 5
- endoplasmic reticulum 6
- golgi 5
- vacuole 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037196.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 92.97 | 93.7 |
| CDY18576 | Canola | endoplasmic reticulum, plasma membrane | 92.58 | 84.64 |
| AT2G10940.2 | Thale cress | endoplasmic reticulum, plasma membrane | 75.39 | 66.32 |
| Solyc07g007860.1.1 | Tomato | extracellular | 32.81 | 60.87 |
| PGSC0003DMT400079355 | Potato | extracellular | 32.03 | 59.85 |
| KRH03647 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 39.84 | 53.68 |
| KRH20158 | Soybean | endoplasmic reticulum | 44.53 | 50.22 |
| VIT_11s0016g05840.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 46.88 | 45.11 |
| Zm00001d002094_P001 | Maize | extracellular, plastid | 32.81 | 41.38 |
| CDY12951 | Canola | extracellular | 42.58 | 39.49 |
| CDY22735 | Canola | extracellular | 36.33 | 39.41 |
| CDY59805 | Canola | extracellular | 35.55 | 38.56 |
| Zm00001d026436_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 30.47 | 38.24 |
| Os04t0644400-01 | Rice | nucleus | 26.95 | 37.91 |
| CDY70376 | Canola | extracellular | 42.19 | 37.76 |
| EES12957 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 31.64 | 37.33 |
| CDY09061 | Canola | extracellular | 36.33 | 36.33 |
| CDY06505 | Canola | extracellular | 29.3 | 36.06 |
| CDY22936 | Canola | plasma membrane | 37.5 | 32.99 |
| CDY47794 | Canola | extracellular | 28.52 | 32.88 |
| TraesCS2B01G546700.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 33.98 | 31.07 |
| TraesCS2A01G518100.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 34.38 | 30.14 |
| TraesCS2D01G519700.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 33.98 | 30.1 |
| CDY19310 | Canola | extracellular | 31.25 | 29.63 |
| CDY39502 | Canola | extracellular | 30.47 | 28.89 |
| HORVU2Hr1G114680.2 | Barley | endoplasmic reticulum | 33.98 | 20.76 |
Protein Annotations
| EnsemblPlants:CDX81428 | EnsemblPlantsGene:GSBRNA2T00135010001 | Gene3D:1.10.110.10 | InterPro:Bifun_inhib/LTP/seed_sf | InterPro:Bifunc_inhib/LTP/seed_store | InterPro:Hydrophob_seed |
| PANTHER:PTHR31731 | PANTHER:PTHR31731:SF54 | PFAM:PF14547 | ProteinID:CDX81428 | ProteinID:CDX81428.1 | SEG:seg |
| SignalP:SignalP-noTM | SMART:SM00499 | SUPFAM:SSF47699 | UniParc:UPI0004EEB94C | MapMan:35.2 | : |
Description
BnaC09g08390D
Coordinates
chrLK031824:-:1698339..1699133
Molecular Weight (calculated)
26078.3 Da
IEP (calculated)
9.311
GRAVY (calculated)
0.393
Length
256 amino acids
Sequence
(BLAST)
(BLAST)
001: MESSKLSSLP LCFILICIIF FPQQSFSCGS CNHRKGGKPS IKPPVTVPKL PLPVPPVTVP KLPVPPVTVP KLPVPPVTVP KLPVPPVTVP KLPVPPVTVP
101: ELPLPPVGGL PIPPVGGLPI PPVGGLPTLP LPPLPIVGPI LPPGTNPPTP GGKDCPPPPG SHKPPSGTGK ATCPIDTLKL GACVDLLGGL VKIGLGDPAA
201: NKCCPLLKGL VEVEAAACLC TTLKLKALNL KLYVPVALQL LLTCGKNPPP GYTCSI
101: ELPLPPVGGL PIPPVGGLPI PPVGGLPTLP LPPLPIVGPI LPPGTNPPTP GGKDCPPPPG SHKPPSGTGK ATCPIDTLKL GACVDLLGGL VKIGLGDPAA
201: NKCCPLLKGL VEVEAAACLC TTLKLKALNL KLYVPVALQL LLTCGKNPPP GYTCSI
001: MDSSKLSSLS LCLFLICIIY LPQHSLACGS CNPRKGGKHS PKAPKLPVPP VTVPKLPVPP VTVPKLPVPP VTVPKLPVPP VTIPKLPVPP VTVPKLPVPP
101: VTVPKLPVPP VTVPKLPVPP VTVPKLPVPP VTVPKLPVPP VTVPKLPLPP ISGLPIPPVV GPNLPLPPLP IVGPILPPGT TPPATGGKDC PPPPGSVKPP
201: SGGGKATCPI DTLKLGACVD LLGGLVKIGL GDPAVNKCCP LLKGLVEVEA AACLCTTLKL KALDLNLYVP VALQLLLTCG KNPPPGYTCS I
101: VTVPKLPVPP VTVPKLPVPP VTVPKLPVPP VTVPKLPVPP VTVPKLPLPP ISGLPIPPVV GPNLPLPPLP IVGPILPPGT TPPATGGKDC PPPPGSVKPP
201: SGGGKATCPI DTLKLGACVD LLGGLVKIGL GDPAVNKCCP LLKGLVEVEA AACLCTTLKL KALDLNLYVP VALQLLLTCG KNPPPGYTCS I
Arabidopsis Description
At2g10940/F15K19.1 [Source:UniProtKB/TrEMBL;Acc:Q9SKI0]
SUBAcon: [endoplasmic reticulum,plasma membrane]
SUBAcon: [endoplasmic reticulum,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.