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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, endoplasmic reticulum, plastid

Predictor Summary:
  • nucleus 1
  • plastid 2
  • endoplasmic reticulum 2
  • extracellular 1
  • golgi 1
  • plasma membrane 2
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, plasma membrane, plastid
Any Predictor:endoplasmic reticulum, nucleus, plasma membrane
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:endoplasmic reticulum
PProwler:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY41535 Canola cytosol, endoplasmic reticulum, plastid 100.0 26.05
CDY39849 Canola cytosol, endoplasmic reticulum, plastid 94.62 24.68
CDX78317 Canola cytosol, plasma membrane, plastid 41.4 12.48
CDY14023 Canola cytosol, plasma membrane, plastid 39.25 11.87
CDY40769 Canola cytosol, plasma membrane, plastid 39.25 11.83
CDX81079 Canola cytosol, plasma membrane, plastid 39.25 10.14
CDY29883 Canola cytosol 1.61 0.65
CDY68130 Canola plastid 1.08 0.44
CDY51490 Canola cytosol 1.08 0.42
CDY30304 Canola cytosol 1.08 0.42
CDY13009 Canola cytosol 1.08 0.41
CDY49312 Canola cytosol 1.08 0.41
CDX88634 Canola plastid 1.08 0.41
CDY03298 Canola cytosol 1.08 0.41
CDY39782 Canola cytosol 1.08 0.41
CDX68647 Canola cytosol 1.08 0.41
CDX81989 Canola cytosol 1.08 0.41
CDY28179 Canola cytosol 1.08 0.41
CDY13851 Canola cytosol 1.08 0.4
CDY58713 Canola cytosol 1.08 0.4
CDX84441 Canola cytosol 0.54 0.22
CDY31352 Canola cytosol 0.0 0.0
CDY39848 Canola cytosol 0.0 0.0
CDX97422 Canola plastid 0.0 0.0
CDY14256 Canola plastid 0.0 0.0
Protein Annotations
KEGG:00561+2.7.1.107KEGG:00564+2.7.1.107KEGG:04070+2.7.1.107MapMan:35.1GO:A0A078D5M8EnsemblPlants:CDX84440
ProteinID:CDX84440ProteinID:CDX84440.1InterPro:DGKGO:GO:0003674GO:GO:0003824GO:GO:0004143
GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0009987GO:GO:0016301GO:GO:0016740
GO:GO:0035556EnsemblPlantsGene:GSBRNA2T00141646001InterPro:IPR002219InterPro:PE/DAG-bdPFscan:PS50081PANTHER:PTHR11255
PANTHER:PTHR11255:SF54TMHMM:TMhelixUniParc:UPI0004EEC40F:::
Description
BnaC03g50600D
Coordinates
chrLK031837:+:1190181..1190741
Molecular Weight (calculated)
20840.0 Da
IEP (calculated)
7.849
GRAVY (calculated)
0.007
Length
186 amino acids
Sequence
(BLAST)
001: MMEVGFSFIH WLINSGADSP FIFGWLVTGS LGVLALVYAF LKWQNKTSLN WVKAAAREKK KVWKRLRVPL SHHQWTDDYG YGPQPSTCCV CLYSLVPGQN
101: VSNKAALSIP VHRCSVCGVA AHFYCSGSAA KDCKCVAQAG SDHVRHHWSE RWVNMDDNAD MSAFCFYCDE PCGVPFIEAS PMWHCL
Best Arabidopsis Sequence Match ( AT5G63770.1 )
(BLAST)
001: MMEVGFSLIQ WLISSGADSP FIFGWLVTGS VGLLAVIYTF LKWQKKTSLN WVKAAAREKK KVWKRLRVPL SHHQWTDDYG YGQQPSTCCV CLYSLVPGQN
101: VSNKASLSIP VHRCAVCGVA AHFYCSSSAA KDCKCVAQAG SDHVRHHWSE RWVNMDDNAD MTAFCFYCDE PCGIPFIEAS PMWHCLWCQR LIHVKCHMIM
201: SKESGDACDL GSLRRVILSP VHVKLNEANG VDGVLTTIKN ELASIRGHVR RKRHRGKNGN GQSLNGKLLE DSVSDPVKTV VNGLVVKKLR RDRSIDCLKQ
301: VSDMPNAKGL QNGIGGHKRN KSAALNFMKK FSLVDLPPDA RPLLVFINAK SGGQLGPFLH RRLNMLLNPV QVFELGSCQG PDAGLDLCSK VKYFRVLVCG
401: GDGTVAWVLD AIEKRNFESP PPVAILPLGT GNDLSRVLQW GRGISVVDGQ GSLRTFLQDI DHAAVTMLDR WSVKIVEEST EKFPAREGHK FMMNYLGIGC
501: DAKVAYEFHM MRQEKPEKFC SQFVNKLRYA KEGARDIMDR ACADLPWQVW LEVDGKDIEI PKDSEGLIVL NIGSYMGGVD LWQNDYEHDD NFSIQCMHDK
601: TLEVVCVRGA WHLGKLQVGL SQARRLAQGK VIRIHVSSPF PVQIDGEPFI QQPGCLEITH HGQVFMLRRA SDEPRGHAAA IMNEVLLDAE CKGVINASQK
701: KVLLQQMALH LS
Arabidopsis Description
DGK2Diacylglycerol kinase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFN7]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.