CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 4
plasma membrane 4
extracellular 2
golgi 2
endoplasmic reticulum 2
vacuole 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra006781.1-P	Field mustard	plasma membrane	97.54	97.54
CDY58573	Canola	plasma membrane	86.42	95.98
AT5G58150.1	Thale cress	plasma membrane	74.26	73.12
CDY67752	Canola	plasma membrane	47.35	44.2
CDY39700	Canola	plasma membrane	43.47	42.97
CDY39452	Canola	plasma membrane	24.58	28.57
CDX77617	Canola	plasma membrane	24.32	28.36

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.7	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:A0A078DHJ4	EnsemblPlants:CDX88660
ProteinID:CDX88660	ProteinID:CDX88660.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00148703001
InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF07714	PFAM:PF13855	PRINTS:PR00019	PFscan:PS50011	PFscan:PS51450
PANTHER:PTHR44913	InterPro:Prot_kinase_dom	SMART:SM00369	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0004EDB331	SEG:seg	:	:

Description

BnaA03g09890D

Coordinates

chrLK031856:-:375457..377778

Molecular Weight (calculated)

83975.3 Da

IEP (calculated)

7.466

GRAVY (calculated)

0.020

Length

773 amino acids

Sequence
(BLAST)

001: MGRLCIWRTL ILLSLFVKQA KSQDPNTDAS HLSNFFNQMS SSSPKAHTFS SLCSSPGVVC DRQKQNILYF SASGSDLSGP IPDNTIGKMR KLQSLDLSRN
101: KITSLPSDLW SLDSLKHLNL SSNLISDPLP SNIGNFVSLQ TLDLSFNTFS GEIPASISSL VGLTALDLSN NAFQSVLPPG LLNCRSLVSI DLSSNRLTGS
201: LPAEFGSAFP ELKSLNLSRN LFQGSVNGVL RGNVETVDLS KNRFDGHVLH LIAGRKHNLS GLIYLDLSEN GFVGHILNGL SSAHKLGHLN LASNRFRVQE
301: FPQILKLSGL YYLNLSRTNL AGSIPSGITQ LSQLKVLDLS YNNLNGNVPL LPLKNIEVLD LSLNKLDGDI PRTVLEKLPV MERFNFSFNN LTFCDPNLSQ
401: GMIQTSFIGS TNNCPFAAKP NVLKGESVSK KKTGLKIGLT LAISMAFLLV GLLVILVAMR GRRKSRTWAT KQAAEPNLLD QGDSSTYVPV VMIDKPLMKM
501: TLADLKAATL NFDSGALLWE SKSGPTYEAV LPGGFRAALK VVSSGSTLSD HEASVTFERL ARINHPNLVP LSGYCIATEQ RIVIYEHLEY VNLHTLLHTA
601: DDDSLSWILR HKIALGTARA LAFLHHGCIP PVVHGEVKAG TIFLDSSQEP QLAEFGLAKL LNEGLLGDLD GYTPTELEEH GSPTLESDVY SFGVVLLELV
701: SGKKAEWDLV NWVRGLVRQG EGSSAIDPTL QGTGPVEQIA EAVKIGYLCT ADLSWKRPTM QQVVGLLKDI SPS

Best Arabidopsis Sequence Match ( AT5G58150.1 )
(BLAST)

001: MRLSLWGSLL FFSFFVKHLT SLDPNTDAYH LSSFFSAMRL PNSPQAHTFS SLCSWPGVVV CDSSENVLHI SASGLDLSGS IPDNTIGKMS KLQTLDLSGN
101: KITSLPSDLW SLSLLESLNL SSNRISEPLP SNIGNFMSLH TLDLSFNSIS GKIPAAISNL VNLTTLKLHN NDFQFGVPPE LVHCRSLLSI DLSSNRLNES
201: LPVGFGSAFP LLKSLNLSRN LFQGSLIGVL HENVETVDLS ENRFDGHILQ LIPGHKHNWS SLIHLDLSDN SFVGHIFNGL SSAHKLGHLN LACNRFRAQE
301: FPEIGKLSAL HYLNLSRTNL TNIIPREISR LSHLKVLDLS SNNLTGHVPM LSVKNIEVLD LSLNKLDGDI PRPLLEKLAM MQRFNFSFNN LTFCNPNFSQ
401: ETIQRSFINI RNNCPFAAKP IITKGKKVNK KNTGLKIGLG LAISMAFLLI GLLLILVALR VRRKSRTWAT KLAINNTEPN SPDQHDSTTD IKQATQIPVV
501: MIDKPLMKMT LADLKAATFN FDRGTMLWEG KSGPTYGAVL PGGFRAALKV IPSGTTLTDT EVSIAFERLA RINHPNLFPL CGYCIATEQR IAIYEDLDMV
601: NLQSLLHNNG DDSAPWRLRH KIALGTARAL AFLHHGCIPP MVHGEVKAAT ILLDSSQEPR LADFGLVKLL DEQFPGSESL DGYTPPEQER NASPTLESDV
701: YSFGVVLLEL VSGKKPEGDL VNWVRGLVRQ GQGLRAIDPT MQETVPEDEI AEAVKIGYLC TADLPWKRPT MQQVVGLLKD ISPNY

Arabidopsis Description

Probably inactive leucine-rich repeat receptor-like protein kinase At5g58150 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVN2]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.