Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plasma membrane 1
- extracellular 1
- endoplasmic reticulum 1
- golgi 1
- vacuole 1
- mitochondrion 3
- cytosol 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX86631 | Canola | cytosol | 98.77 | 98.77 |
| CDY21127 | Canola | cytosol | 98.77 | 98.77 |
| CDY49340 | Canola | cytosol | 98.77 | 98.77 |
| HORVU6Hr1G090170.1 | Barley | cytosol | 100.0 | 64.8 |
| CDY15508 | Canola | mitochondrion | 100.0 | 57.86 |
| CDY53193 | Canola | mitochondrion | 100.0 | 57.86 |
| CDX74191 | Canola | mitochondrion | 98.77 | 57.14 |
| CDX92068 | Canola | mitochondrion | 98.77 | 57.14 |
| CDY18235 | Canola | mitochondrion | 98.77 | 57.14 |
| CDY42923 | Canola | mitochondrion | 98.77 | 57.14 |
| CDY49341 | Canola | nucleus | 12.35 | 1.8 |
| CDY04931 | Canola | cytosol, extracellular, nucleus | 1.23 | 1.32 |
| CDX74192 | Canola | nucleus | 3.7 | 0.64 |
| CDX92067 | Canola | nucleus | 3.7 | 0.64 |
| CDY42922 | Canola | plasma membrane, vacuole | 2.47 | 0.24 |
| GSMUA_Achr5P27620_001 | Banana | nucleus | 1.23 | 0.16 |
| CDX80930 | Canola | nucleus | 1.23 | 0.16 |
| CDY11319 | Canola | nucleus | 1.23 | 0.16 |
| CDX98805 | Canola | nucleus | 1.23 | 0.15 |
| CDX96449 | Canola | nucleus | 1.23 | 0.15 |
| CDY59935 | Canola | nucleus | 1.23 | 0.15 |
| CDX68245 | Canola | nucleus | 1.23 | 0.15 |
| CDY11129 | Canola | nucleus | 1.23 | 0.15 |
| CDY61331 | Canola | nucleus | 1.23 | 0.15 |
| CDY14135 | Canola | nucleus | 1.23 | 0.14 |
| TraesCS4B01G280000.1 | Wheat | nucleus | 1.23 | 0.14 |
| TraesCS3A01G385200.1 | Wheat | plastid | 1.23 | 0.14 |
| CDY56214 | Canola | nucleus | 1.23 | 0.13 |
| Os11t0602200-01 | Rice | nucleus | 1.23 | 0.12 |
| EES10399 | Sorghum | nucleus | 1.23 | 0.12 |
| TraesCS4D01G278500.1 | Wheat | nucleus | 1.23 | 0.12 |
| EER96081 | Sorghum | nucleus | 1.23 | 0.12 |
| TraesCS3B01G417400.1 | Wheat | nucleus | 1.23 | 0.12 |
| TraesCS4A01G023500.1 | Wheat | nucleus | 1.23 | 0.12 |
| Zm00001d019195_P001 | Maize | nucleus | 1.23 | 0.12 |
| CDX70182 | Canola | nucleus | 1.23 | 0.1 |
| CDY01852 | Canola | plasma membrane | 1.23 | 0.05 |
| CDX70530 | Canola | nucleus | 0.0 | 0.0 |
| CDX73506 | Canola | nucleus | 0.0 | 0.0 |
| CDX77744 | Canola | cytosol | 0.0 | 0.0 |
| CDX77745 | Canola | nucleus | 0.0 | 0.0 |
| CDX78210 | Canola | nucleus | 0.0 | 0.0 |
| CDX78549 | Canola | nucleus | 0.0 | 0.0 |
| CDX84255 | Canola | nucleus | 0.0 | 0.0 |
| CDX89510 | Canola | nucleus | 0.0 | 0.0 |
| CDX94744 | Canola | nucleus | 0.0 | 0.0 |
| CDX96935 | Canola | nucleus | 0.0 | 0.0 |
| CDX98804 | Canola | nucleus | 0.0 | 0.0 |
| CDY14903 | Canola | nucleus | 0.0 | 0.0 |
| CDY17156 | Canola | nucleus | 0.0 | 0.0 |
| CDY19475 | Canola | nucleus | 0.0 | 0.0 |
| CDY22319 | Canola | nucleus | 0.0 | 0.0 |
| CDY23755 | Canola | nucleus | 0.0 | 0.0 |
| CDY25627 | Canola | nucleus | 0.0 | 0.0 |
| CDY26218 | Canola | nucleus | 0.0 | 0.0 |
| CDY26221 | Canola | nucleus | 0.0 | 0.0 |
| CDY28970 | Canola | cytosol | 0.0 | 0.0 |
| CDY28971 | Canola | mitochondrion | 0.0 | 0.0 |
| CDY31670 | Canola | nucleus | 0.0 | 0.0 |
| CDY33517 | Canola | cytosol, mitochondrion, nucleus | 0.0 | 0.0 |
| CDY33518 | Canola | nucleus | 0.0 | 0.0 |
| CDY37735 | Canola | nucleus, plastid | 0.0 | 0.0 |
| CDY39668 | Canola | nucleus | 0.0 | 0.0 |
| CDY40566 | Canola | cytosol, plastid | 0.0 | 0.0 |
| CDY40567 | Canola | mitochondrion | 0.0 | 0.0 |
| CDY46064 | Canola | nucleus | 0.0 | 0.0 |
| CDY50660 | Canola | nucleus | 0.0 | 0.0 |
| CDY51752 | Canola | nucleus | 0.0 | 0.0 |
| CDY62521 | Canola | nucleus | 0.0 | 0.0 |
| CDY66122 | Canola | nucleus | 0.0 | 0.0 |
| EES01635 | Sorghum | nucleus | 0.0 | 0.0 |
| EES19725 | Sorghum | nucleus | 0.0 | 0.0 |
| KRG95012 | Soybean | plastid | 0.0 | 0.0 |
| KRH66648 | Soybean | nucleus | 0.0 | 0.0 |
| OQU78645 | Sorghum | nucleus | 0.0 | 0.0 |
| Os01t0811300-01 | Rice | nucleus, plasma membrane | 0.0 | 0.0 |
| Os05t0490700-01 | Rice | extracellular | 0.0 | 0.0 |
| Os11t0131600-00 | Rice | nucleus | 0.0 | 0.0 |
| Os12t0128450-00 | Rice | nucleus | 0.0 | 0.0 |
| PGSC0003DMT400018512 | Potato | nucleus | 0.0 | 0.0 |
| PGSC0003DMT400077329 | Potato | nucleus | 0.0 | 0.0 |
| Solyc09g082050.2.1 | Tomato | nucleus | 0.0 | 0.0 |
| Solyc10g077070.1.1 | Tomato | nucleus | 0.0 | 0.0 |
| TraesCS1A01G308300.1 | Wheat | nucleus | 0.0 | 0.0 |
| TraesCS1A01G362000.1 | Wheat | nucleus | 0.0 | 0.0 |
| TraesCS1B01G319000.1 | Wheat | nucleus | 0.0 | 0.0 |
| TraesCS1B01G378900.1 | Wheat | nucleus | 0.0 | 0.0 |
| TraesCS1D01G307700.1 | Wheat | nucleus | 0.0 | 0.0 |
| TraesCS1D01G366800.1 | Wheat | nucleus | 0.0 | 0.0 |
| TraesCS3A01G336100.1 | Wheat | nucleus | 0.0 | 0.0 |
| TraesCS3B01G366900.1 | Wheat | nucleus | 0.0 | 0.0 |
| TraesCS3B01G367200.1 | Wheat | nucleus | 0.0 | 0.0 |
| TraesCS3D01G329100.1 | Wheat | nucleus | 0.0 | 0.0 |
| TraesCS3D01G378200.1 | Wheat | plastid | 0.0 | 0.0 |
| TraesCS5A01G140500.1 | Wheat | nucleus | 0.0 | 0.0 |
| TraesCS5B01G138800.1 | Wheat | nucleus | 0.0 | 0.0 |
| TraesCS5D01G152000.1 | Wheat | nucleus | 0.0 | 0.0 |
| VIT_08s0040g00360.t01 | Wine grape | nucleus | 0.0 | 0.0 |
| Zm00001d010646_P001 | Maize | plastid | 0.0 | 0.0 |
| Zm00001d038541_P002 | Maize | nucleus | 0.0 | 0.0 |
| Zm00001d041005_P001 | Maize | nucleus | 0.0 | 0.0 |
| Zm00001d043135_P003 | Maize | nucleus | 0.0 | 0.0 |
Protein Annotations
| MapMan:17.1.2.1.23 | Gene3D:2.40.150.20 | GO:A0A078DKQ5 | EnsemblPlants:CDX89821 | ProteinID:CDX89821 | ProteinID:CDX89821.1 |
| GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00150276001 | InterPro:IPR036853 | PFAM:PF00238 | ScanProsite:PS00049 |
| PANTHER:PTHR11761 | PANTHER:PTHR11761:SF14 | InterPro:Ribosomal_L14P | InterPro:Ribosomal_L14P_CS | InterPro:Ribosomal_L14_sf | SMART:SM01374 |
| SUPFAM:SSF50193 | UniParc:UPI0004EDBAF1 | : | : | : | : |
Description
BnaA10g02610D
Coordinates
chrLK031861:-:214253..215543
Molecular Weight (calculated)
8940.2 Da
IEP (calculated)
10.968
GRAVY (calculated)
-0.207
Length
81 amino acids
Sequence
(BLAST)
(BLAST)
1: MVMATVKKGK PDLRKKVMPA VIVRQRKPWR RKDGVFMYFE DNAGVIVNPK GEMKGSAITG PIGKECADLW PRIASAANAI V
001: MSKRGRGGTS GNKFRMSLGL PVAATVNCAD NTGAKNLYII SVKGIKGRLN RLPSACVGDM VMATVKKGKP DLRKKVLPAV IVRQRKPWRR KDGVFMYFED
101: NAGVIVNPKG EMKGSAITGP IGKECADLWP RIASAANAIV
101: NAGVIVNPKG EMKGSAITGP IGKECADLWP RIASAANAIV
Arabidopsis Description
RPL23AAt2g33370 [Source:UniProtKB/TrEMBL;Acc:Q1H559]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.