Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX74192 | Canola | nucleus | 92.58 | 93.58 |
| AT3G04380.1 | Thale cress | nucleus | 78.6 | 75.41 |
| CDY49341 | Canola | nucleus | 82.84 | 70.2 |
| Bra001104.1-P | Field mustard | nucleus | 94.49 | 58.99 |
| CDY42922 | Canola | plasma membrane, vacuole | 84.32 | 48.07 |
| Zm00001d051126_P004 | Maize | nucleus | 44.49 | 41.42 |
| TraesCSU01G137800.1 | Wheat | nucleus | 36.02 | 40.77 |
| PGSC0003DMT400051920 | Potato | nucleus | 41.1 | 38.11 |
| KRH34133 | Soybean | nucleus | 54.45 | 37.46 |
| KRH68776 | Soybean | nucleus | 52.12 | 36.34 |
| KRG92731 | Soybean | nucleus | 54.87 | 36.33 |
| KRG97025 | Soybean | nucleus | 21.19 | 35.21 |
| TraesCS2D01G478100.1 | Wheat | nucleus | 44.28 | 34.95 |
| TraesCS2B01G503200.1 | Wheat | nucleus | 44.49 | 34.94 |
| TraesCS2A01G478800.1 | Wheat | nucleus | 44.28 | 34.83 |
| GSMUA_Achr1P20340_001 | Banana | nucleus | 50.21 | 33.38 |
| CDY04931 | Canola | cytosol, extracellular, nucleus | 5.3 | 32.89 |
| OQU85329 | Sorghum | nucleus | 47.25 | 32.89 |
| HORVU7Hr1G064110.6 | Barley | nucleus, plastid | 42.16 | 32.73 |
| TraesCS6B01G255000.1 | Wheat | nucleus | 46.19 | 32.01 |
| TraesCS6D01G208400.1 | Wheat | nucleus | 45.97 | 31.86 |
| TraesCS6A01G226600.1 | Wheat | nucleus | 45.97 | 31.86 |
| TraesCS2D01G378500.3 | Wheat | nucleus | 43.86 | 30.53 |
| TraesCS2A01G382000.5 | Wheat | nucleus | 43.64 | 30.43 |
| Os02t0621100-01 | Rice | nucleus | 47.67 | 30.36 |
| TraesCS2B01G399300.4 | Wheat | nucleus | 43.01 | 29.99 |
| TraesCS2D01G477200.1 | Wheat | mitochondrion, nucleus | 45.97 | 29.4 |
| TraesCS2B01G501300.2 | Wheat | mitochondrion, nucleus | 45.76 | 29.19 |
| HORVU2Hr1G127700.1 | Barley | nucleus | 43.64 | 29.14 |
| EES15150 | Sorghum | nucleus | 45.55 | 29.09 |
| TraesCS2A01G478000.1 | Wheat | mitochondrion, nucleus | 45.76 | 28.99 |
| CDY14903 | Canola | nucleus | 39.19 | 28.91 |
| HORVU2Hr1G107560.8 | Barley | mitochondrion, nucleus | 44.07 | 28.61 |
| Zm00001d049884_P006 | Maize | nucleus | 44.92 | 28.53 |
| TraesCS2B01G616200.1 | Wheat | nucleus | 43.86 | 28.09 |
| TraesCS2D01G566400.1 | Wheat | nucleus | 43.43 | 27.82 |
| Zm00001d031851_P002 | Maize | nucleus | 43.86 | 27.79 |
| HORVU2Hr1G127770.1 | Barley | nucleus | 40.25 | 26.87 |
| EES13161 | Sorghum | nucleus | 44.49 | 26.65 |
| VIT_07s0005g04190.t01 | Wine grape | mitochondrion, nucleus | 47.67 | 26.53 |
| CDX94744 | Canola | nucleus | 38.35 | 26.42 |
| HORVU6Hr1G057990.5 | Barley | nucleus | 44.49 | 26.02 |
| CDY22319 | Canola | nucleus | 38.35 | 25.67 |
| Solyc06g083760.2.1 | Tomato | nucleus | 46.19 | 25.32 |
| Solyc09g072890.1.1 | Tomato | nucleus | 43.01 | 24.61 |
| CDX96935 | Canola | nucleus | 40.04 | 24.11 |
| CDY50660 | Canola | nucleus | 16.53 | 23.21 |
| Zm00001d002938_P001 | Maize | nucleus | 34.32 | 22.78 |
| CDY51752 | Canola | nucleus | 16.1 | 22.62 |
| CDX68245 | Canola | nucleus | 21.4 | 15.17 |
| CDY11129 | Canola | nucleus | 21.4 | 15.1 |
| CDY61331 | Canola | nucleus | 21.19 | 14.95 |
| CDX70530 | Canola | nucleus | 18.43 | 14.43 |
| CDX96449 | Canola | nucleus | 19.92 | 14.31 |
| CDY59935 | Canola | nucleus | 19.92 | 14.26 |
| CDX78549 | Canola | nucleus | 18.22 | 14.24 |
| CDX80930 | Canola | nucleus | 19.07 | 13.98 |
| CDY11319 | Canola | nucleus | 19.07 | 13.95 |
| CDX98805 | Canola | nucleus | 18.64 | 13.44 |
| CDY31670 | Canola | nucleus | 19.92 | 13.11 |
| CDX84255 | Canola | nucleus | 19.7 | 12.9 |
| CDX98804 | Canola | nucleus | 16.74 | 12.89 |
| CDY46064 | Canola | nucleus | 13.14 | 12.6 |
| CDX89510 | Canola | nucleus | 19.7 | 12.27 |
| CDX78210 | Canola | nucleus | 16.31 | 12.2 |
| CDY25627 | Canola | nucleus | 19.28 | 12.2 |
| CDX73506 | Canola | nucleus | 16.31 | 12.16 |
| CDY14135 | Canola | nucleus | 18.43 | 12.05 |
| CDY19475 | Canola | nucleus | 13.98 | 11.96 |
| CDY26218 | Canola | nucleus | 17.58 | 11.89 |
| CDY66122 | Canola | nucleus | 17.8 | 11.76 |
| CDY17156 | Canola | nucleus | 13.77 | 11.48 |
| CDY37735 | Canola | nucleus, plastid | 15.25 | 11.3 |
| CDY23755 | Canola | nucleus | 15.04 | 11.15 |
| CDY56214 | Canola | nucleus | 16.74 | 9.96 |
| CDY26221 | Canola | nucleus | 16.31 | 8.6 |
| CDX70182 | Canola | nucleus | 17.58 | 8.2 |
| CDY62521 | Canola | nucleus | 22.46 | 7.76 |
| CDY39668 | Canola | nucleus | 21.82 | 7.54 |
| CDY01852 | Canola | plasma membrane | 16.1 | 4.09 |
| CDX86631 | Canola | cytosol | 0.64 | 3.7 |
| CDX89821 | Canola | cytosol | 0.64 | 3.7 |
| CDY21127 | Canola | cytosol | 0.64 | 3.7 |
| CDY49340 | Canola | cytosol | 0.64 | 3.7 |
| CDX74191 | Canola | mitochondrion | 0.85 | 2.86 |
| CDX92068 | Canola | mitochondrion | 0.85 | 2.86 |
| CDY53193 | Canola | mitochondrion | 0.85 | 2.86 |
| CDY15508 | Canola | mitochondrion | 0.85 | 2.86 |
| CDY18235 | Canola | mitochondrion | 0.85 | 2.86 |
| CDY42923 | Canola | mitochondrion | 0.85 | 2.86 |
| CDX77745 | Canola | nucleus | 1.91 | 2.34 |
| CDY28970 | Canola | cytosol | 1.06 | 2.0 |
| CDY33518 | Canola | nucleus | 1.48 | 1.92 |
| CDY40567 | Canola | mitochondrion | 1.27 | 1.87 |
| CDY33517 | Canola | cytosol, mitochondrion, nucleus | 1.27 | 1.81 |
| CDX77744 | Canola | cytosol | 1.27 | 1.81 |
| CDY40566 | Canola | cytosol, plastid | 1.06 | 1.77 |
| CDY28971 | Canola | mitochondrion | 1.27 | 1.75 |
Protein Annotations
| KEGG:00310+2.1.1.43 | Gene3D:1.10.8.850 | MapMan:12.3.3.7 | GO:A0A078DT68 | EnsemblPlants:CDX92067 | ProteinID:CDX92067 |
| ProteinID:CDX92067.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008270 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016740 | GO:GO:0018024 | GO:GO:0019538 |
| GO:GO:0034968 | EnsemblPlantsGene:GSBRNA2T00153738001 | InterPro:IPR001214 | InterPro:IPR007728 | InterPro:IPR025776 | PFAM:PF00856 |
| PFAM:PF05033 | PFAM:PF10440 | PFscan:PS50280 | PFscan:PS50867 | PFscan:PS51580 | PANTHER:PTHR22884 |
| PANTHER:PTHR22884:SF460 | InterPro:Pre-SET_dom | InterPro:SET_dom | SMART:SM00317 | SMART:SM00468 | SUPFAM:SSF82199 |
| InterPro:SUVR4/1/2 | UniParc:UPI0004EDF8F4 | InterPro:WIYLD_domain | : | : | : |
Description
BnaC03g33690D
Coordinates
chrLK031870:+:1513326..1515954
Molecular Weight (calculated)
53819.8 Da
IEP (calculated)
7.324
GRAVY (calculated)
-0.632
Length
472 amino acids
Sequence
(BLAST)
(BLAST)
001: MQPLVLNDER VRRACEKTRE LKIPDDKTLL VLRKLLRENG ENWGIIKLDN YSALIDAIYS LDEENETPKQ SEGSSNGNRG KNDKNVDSPA TLKTIYETRF
101: ATSSSSVEGV QQQPQTSNGV RKRKYKTIIH DITKGSESVE ISLVDDFGTE KVPTFTYIPH NIVYQSAYVH VSLARISDDD CCASCKGDCL SADFPCACAR
201: ETSGEYAYTK EGLLKEEFLD TCLKMKKAPD TFNKFYCQDC PLERDHGKCQ GHLIRKFVKE CWRKCGCDML CGNRVVQRGI RCQLQVYFTS EGKGWGVRPL
301: QDLPKGTFVY EYIGEILTNT ELYERNLRLS SERHTYPVTL DADWGSEKDL KDEEALCLDA TICGNVARFV NHRCGDANLI DIPVQIETPD RHYYHIAFFT
401: IRDVKAMEEL TWDYMIDFSD ESHPVKAFRC SCGSELCRDK KPIGSRGKSG ERRKVVHAKR QPDTKAVPLK RK
101: ATSSSSVEGV QQQPQTSNGV RKRKYKTIIH DITKGSESVE ISLVDDFGTE KVPTFTYIPH NIVYQSAYVH VSLARISDDD CCASCKGDCL SADFPCACAR
201: ETSGEYAYTK EGLLKEEFLD TCLKMKKAPD TFNKFYCQDC PLERDHGKCQ GHLIRKFVKE CWRKCGCDML CGNRVVQRGI RCQLQVYFTS EGKGWGVRPL
301: QDLPKGTFVY EYIGEILTNT ELYERNLRLS SERHTYPVTL DADWGSEKDL KDEEALCLDA TICGNVARFV NHRCGDANLI DIPVQIETPD RHYYHIAFFT
401: IRDVKAMEEL TWDYMIDFSD ESHPVKAFRC SCGSELCRDK KPIGSRGKSG ERRKVVHAKR QPDTKAVPLK RK
001: MISLSGLTSS VESDLDMQQA MLTNKDEKVL KALERTRQLD IPDEKTMPVL MKLLEEAGGN WSYIKLDNYT ALVDAIYSVE DENKQSEGSS NGNRGKNLKV
101: IDSPATLKKT YETRSASSGS SIQVVQKQPQ LSNGDRKRKY KSRIADITKG SESVKIPLVD DVGSEAVPKF TYIPHNIVYQ SAYLHVSLAR ISDEDCCANC
201: KGNCLSADFP CTCARETSGE YAYTKEGLLK EKFLDTCLKM KKEPDSFPKV YCKDCPLERD HDKGTYGKCD GHLIRKFIKE CWRKCGCDMQ CGNRVVQRGI
301: RCQLQVYFTQ EGKGWGLRTL QDLPKGTFIC EYIGEILTNT ELYDRNVRSS SERHTYPVTL DADWGSEKDL KDEEALCLDA TICGNVARFI NHRCEDANMI
401: DIPIEIETPD RHYYHIAFFT LRDVKAMDEL TWDYMIDFND KSHPVKAFRC CCGSESCRDR KIKGSQGKSI ERRKIVSAKK QQGSKEVSKK RK
101: IDSPATLKKT YETRSASSGS SIQVVQKQPQ LSNGDRKRKY KSRIADITKG SESVKIPLVD DVGSEAVPKF TYIPHNIVYQ SAYLHVSLAR ISDEDCCANC
201: KGNCLSADFP CTCARETSGE YAYTKEGLLK EKFLDTCLKM KKEPDSFPKV YCKDCPLERD HDKGTYGKCD GHLIRKFIKE CWRKCGCDMQ CGNRVVQRGI
301: RCQLQVYFTQ EGKGWGLRTL QDLPKGTFIC EYIGEILTNT ELYDRNVRSS SERHTYPVTL DADWGSEKDL KDEEALCLDA TICGNVARFI NHRCEDANMI
401: DIPIEIETPD RHYYHIAFFT LRDVKAMDEL TWDYMIDFND KSHPVKAFRC CCGSESCRDR KIKGSQGKSI ERRKIVSAKK QQGSKEVSKK RK
Arabidopsis Description
SUVR4Histone-lysine N-methyltransferase SUVR4 [Source:UniProtKB/Swiss-Prot;Acc:Q8W595]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.