Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plasma membrane 1
- extracellular 1
- endoplasmic reticulum 1
- golgi 1
- vacuole 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G73100.1 | CDY21586 | AT5G09540.1 | 21798944 |
| AT1G73100.1 | CDY69792 | AT5G09540.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra016018.1-P | Field mustard | nucleus | 99.24 | 96.31 |
| CDY59935 | Canola | nucleus | 94.52 | 94.23 |
| CDX68245 | Canola | nucleus | 84.78 | 83.63 |
| CDY61331 | Canola | nucleus | 85.08 | 83.56 |
| CDY11129 | Canola | nucleus | 84.78 | 83.26 |
| AT1G73100.1 | Thale cress | nucleus | 81.74 | 80.27 |
| CDY04931 | Canola | cytosol, extracellular, nucleus | 7.46 | 64.47 |
| CDX80930 | Canola | nucleus | 58.3 | 59.47 |
| CDY11319 | Canola | nucleus | 57.84 | 58.91 |
| CDX98805 | Canola | nucleus | 57.23 | 57.4 |
| CDX98804 | Canola | nucleus | 52.51 | 56.28 |
| CDY14135 | Canola | nucleus | 57.23 | 52.08 |
| GSMUA_Achr5P27620_001 | Banana | nucleus | 39.88 | 42.39 |
| Os12t0128450-00 | Rice | nucleus | 38.97 | 41.69 |
| Os11t0131600-00 | Rice | nucleus | 41.55 | 41.11 |
| TraesCS4B01G280000.1 | Wheat | nucleus | 45.05 | 40.83 |
| EES19725 | Sorghum | nucleus | 41.86 | 40.8 |
| Zm00001d010646_P001 | Maize | plastid | 40.49 | 40.8 |
| CDY26218 | Canola | nucleus | 43.07 | 40.54 |
| TraesCS1A01G362000.1 | Wheat | nucleus | 41.25 | 40.09 |
| TraesCS1B01G378900.1 | Wheat | nucleus | 41.1 | 40.06 |
| Os05t0490700-01 | Rice | extracellular | 40.94 | 40.03 |
| TraesCS1D01G366800.1 | Wheat | nucleus | 41.1 | 39.94 |
| CDY66122 | Canola | nucleus | 43.38 | 39.92 |
| Zm00001d038541_P002 | Maize | nucleus | 41.86 | 39.74 |
| TraesCS1D01G307700.1 | Wheat | nucleus | 40.64 | 39.61 |
| TraesCS1B01G319000.1 | Wheat | nucleus | 40.33 | 39.32 |
| TraesCS1A01G308300.1 | Wheat | nucleus | 40.03 | 39.02 |
| TraesCS5A01G140500.1 | Wheat | nucleus | 40.18 | 38.71 |
| TraesCS5D01G152000.1 | Wheat | nucleus | 40.49 | 38.66 |
| CDX70182 | Canola | nucleus | 59.06 | 38.34 |
| TraesCS5B01G138800.1 | Wheat | nucleus | 41.1 | 38.03 |
| TraesCS4D01G278500.1 | Wheat | nucleus | 47.03 | 37.73 |
| CDY56214 | Canola | nucleus | 45.51 | 37.7 |
| TraesCS3A01G385200.1 | Wheat | plastid | 41.4 | 37.47 |
| Os11t0602200-01 | Rice | nucleus | 45.81 | 37.02 |
| TraesCS4A01G023500.1 | Wheat | nucleus | 46.88 | 36.93 |
| Os01t0811300-01 | Rice | nucleus, plasma membrane | 41.25 | 36.82 |
| EES01635 | Sorghum | nucleus | 41.55 | 36.79 |
| EER96081 | Sorghum | nucleus | 46.27 | 36.63 |
| TraesCS3B01G367200.1 | Wheat | nucleus | 41.4 | 36.61 |
| TraesCS3B01G366900.1 | Wheat | nucleus | 41.4 | 36.61 |
| TraesCS3A01G336100.1 | Wheat | nucleus | 41.4 | 36.51 |
| TraesCS3D01G329100.1 | Wheat | nucleus | 40.94 | 36.2 |
| Zm00001d041005_P001 | Maize | nucleus | 38.51 | 36.19 |
| OQU78645 | Sorghum | nucleus | 40.94 | 36.06 |
| EES10399 | Sorghum | nucleus | 44.9 | 36.02 |
| Zm00001d019195_P001 | Maize | nucleus | 45.97 | 35.28 |
| TraesCS3B01G417400.1 | Wheat | nucleus | 44.6 | 35.17 |
| Zm00001d043135_P003 | Maize | nucleus | 40.49 | 34.15 |
| CDY28970 | Canola | cytosol | 12.94 | 34.0 |
| TraesCS3D01G378200.1 | Wheat | plastid | 35.31 | 33.87 |
| CDY19475 | Canola | nucleus | 27.09 | 32.25 |
| CDY17156 | Canola | nucleus | 27.55 | 31.98 |
| CDY40566 | Canola | cytosol, plastid | 13.7 | 31.8 |
| CDY26221 | Canola | nucleus | 42.92 | 31.51 |
| CDX78210 | Canola | nucleus | 28.77 | 29.95 |
| CDY23755 | Canola | nucleus | 28.92 | 29.83 |
| CDX73506 | Canola | nucleus | 28.61 | 29.7 |
| CDY37735 | Canola | nucleus, plastid | 28.46 | 29.36 |
| CDX78549 | Canola | nucleus | 26.64 | 28.97 |
| CDX70530 | Canola | nucleus | 26.48 | 28.86 |
| CDY31670 | Canola | nucleus | 30.44 | 27.89 |
| CDX84255 | Canola | nucleus | 30.59 | 27.88 |
| CDY50660 | Canola | nucleus | 13.7 | 26.79 |
| CDX89510 | Canola | nucleus | 30.75 | 26.65 |
| CDY25627 | Canola | nucleus | 30.14 | 26.54 |
| CDY40567 | Canola | mitochondrion | 12.94 | 26.48 |
| CDY33517 | Canola | cytosol, mitochondrion, nucleus | 13.09 | 25.9 |
| CDX77744 | Canola | cytosol | 13.09 | 25.9 |
| CDY51752 | Canola | nucleus | 13.24 | 25.89 |
| CDY28971 | Canola | mitochondrion | 12.94 | 24.85 |
| CDY33518 | Canola | nucleus | 13.55 | 24.45 |
| CDX77745 | Canola | nucleus | 13.39 | 22.86 |
| CDX74192 | Canola | nucleus | 14.46 | 20.34 |
| CDX92067 | Canola | nucleus | 14.31 | 19.92 |
| CDY49341 | Canola | nucleus | 14.61 | 17.24 |
| CDY01852 | Canola | plasma membrane | 46.42 | 16.43 |
| CDY14903 | Canola | nucleus | 14.61 | 15.0 |
| CDX94744 | Canola | nucleus | 14.46 | 13.87 |
| CDY22319 | Canola | nucleus | 14.61 | 13.62 |
| CDY42922 | Canola | plasma membrane, vacuole | 16.29 | 12.92 |
| CDX96935 | Canola | nucleus | 15.07 | 12.63 |
| CDY46064 | Canola | nucleus | 8.98 | 11.99 |
| CDY62521 | Canola | nucleus | 18.26 | 8.78 |
| CDY39668 | Canola | nucleus | 18.26 | 8.78 |
| CDY21127 | Canola | cytosol | 0.15 | 1.23 |
| CDX86631 | Canola | cytosol | 0.15 | 1.23 |
| CDX89821 | Canola | cytosol | 0.15 | 1.23 |
| CDY49340 | Canola | cytosol | 0.15 | 1.23 |
| HORVU6Hr1G090170.1 | Barley | cytosol | 0.15 | 0.8 |
| CDX92068 | Canola | mitochondrion | 0.15 | 0.71 |
| CDY15508 | Canola | mitochondrion | 0.15 | 0.71 |
| CDY18235 | Canola | mitochondrion | 0.15 | 0.71 |
| CDY42923 | Canola | mitochondrion | 0.15 | 0.71 |
| CDX74191 | Canola | mitochondrion | 0.15 | 0.71 |
| CDY53193 | Canola | mitochondrion | 0.15 | 0.71 |
Protein Annotations
| KEGG:00310+2.1.1.43 | MapMan:12.3.3.7 | MapMan:12.5.1.16.1 | Gene3D:2.170.270.10 | Gene3D:2.30.280.10 | GO:A0A078E6W6 |
| EnsemblPlants:CDX96449 | ProteinID:CDX96449 | ProteinID:CDX96449.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006464 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016571 |
| GO:GO:0016740 | GO:GO:0018024 | GO:GO:0019538 | GO:GO:0034968 | EnsemblPlantsGene:GSBRNA2T00102619001 | InterPro:Hist-Lys_N-MeTrfase_plant |
| InterPro:IPR001214 | InterPro:IPR003105 | InterPro:IPR003616 | InterPro:IPR007728 | InterPro:IPR025794 | InterPro:IPR036987 |
| PFAM:PF00856 | PFAM:PF02182 | PFAM:PF05033 | PFscan:PS50280 | PFscan:PS50867 | PFscan:PS50868 |
| PFscan:PS51015 | PFscan:PS51575 | PANTHER:PTHR22884 | PANTHER:PTHR22884:SF415 | InterPro:PUA-like_sf | InterPro:Post-SET_dom |
| InterPro:Pre-SET_dom | InterPro:SET_dom | SMART:SM00317 | SMART:SM00466 | SMART:SM00468 | InterPro:SRA-YDG_sf |
| InterPro:SRA_YDG | SUPFAM:SSF82199 | SUPFAM:SSF88697 | UniParc:UPI0004EF4984 | SEG:seg | : |
Description
BnaA07g30600D
Coordinates
chrLK031894:+:890930..893721
Molecular Weight (calculated)
71422.7 Da
IEP (calculated)
8.088
GRAVY (calculated)
-0.415
Length
657 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGVPGINTV PNPNYYDKSI VLDVKPLRSL KPVFPNGNQG PPFVGCPPFG PPSSSSGPSP FYPFGSQQPP DLNQTQDTPP PTFVTPLQSY RSPTEVSNGP
101: SSSSGTKKGV GRPKRNAVSI APSSSSKKTS LDVVQVVKRD FDSGISAPER EDGNTDLVSS VLMRFDAVRR RLSQVEHGKA GTSKAAGVLM SNGVRTNMKK
201: RVGTVPGIEV GDIFFSRIEM CLVGLHMQTM AGIDYITSKV GAEEEPLATS IVSSGRYDGE AQDPESLIYS GQGGNADKNG QASDQKLERG NLALEKSLRK
301: GNGVRVIRGE EDPASKTGKI YIYDGVYTIS ESWVEKGKNG CNTFKYKLVR VPNQPPAFGV WKAVHKWKEG LTPRANLILP DITSGVESKP VSLVNDVDGE
401: KGPSYFTYIS TLKPSKQTQP PTIGCSCHGS CAAGNLDCSC VRKNGGDLPY LNGVMLVSRR PMVYECGTTC PCHASCKNKV IQTGLKFRME VFKTDHRGWG
501: LRSWDPIRAG SFICEYAGEV VRMEQEDDEF VFDTSRVYNS FKWNYEPALV DEDPSDEVPE EFNLPSPVLI SAKSFGNVAR FMNHSCSPNV MWQPVFVEGS
601: GESVVHIAFF AIRHIPPMAE LTYDYGVSLA SEARDGSLLH GKRKCLCGSV KCRGSFG
101: SSSSGTKKGV GRPKRNAVSI APSSSSKKTS LDVVQVVKRD FDSGISAPER EDGNTDLVSS VLMRFDAVRR RLSQVEHGKA GTSKAAGVLM SNGVRTNMKK
201: RVGTVPGIEV GDIFFSRIEM CLVGLHMQTM AGIDYITSKV GAEEEPLATS IVSSGRYDGE AQDPESLIYS GQGGNADKNG QASDQKLERG NLALEKSLRK
301: GNGVRVIRGE EDPASKTGKI YIYDGVYTIS ESWVEKGKNG CNTFKYKLVR VPNQPPAFGV WKAVHKWKEG LTPRANLILP DITSGVESKP VSLVNDVDGE
401: KGPSYFTYIS TLKPSKQTQP PTIGCSCHGS CAAGNLDCSC VRKNGGDLPY LNGVMLVSRR PMVYECGTTC PCHASCKNKV IQTGLKFRME VFKTDHRGWG
501: LRSWDPIRAG SFICEYAGEV VRMEQEDDEF VFDTSRVYNS FKWNYEPALV DEDPSDEVPE EFNLPSPVLI SAKSFGNVAR FMNHSCSPNV MWQPVFVEGS
601: GESVVHIAFF AIRHIPPMAE LTYDYGVSLA SEARDGSLLH GKRKCLCGSV KCRGSFG
001: MQGVPGFNTV PNPNHYDKSI VLDIKPLRSL KPVFPNGNQG PPFVGCPPFG PSSSEYSSFF PFGAQQPTHD TPDLNQTQNT PIPSFVPPLR SYRTPTKTNG
101: PSSSSGTKRG VGRPKGTTSV KKKEKKTVAN EPNLDVQVVK KFSSDFDSGI SAAEREDGNA YLVSSVLMRF DAVRRRLSQV EFTKSATSKA AGTLMSNGVR
201: TNMKKRVGTV PGIEVGDIFF SRIEMCLVGL HMQTMAGIDY IISKAGSDEE SLATSIVSSG RYEGEAQDPE SLIYSGQGGN ADKNRQASDQ KLERGNLALE
301: NSLRKGNGVR VVRGEEDAAS KTGKIYIYDG LYSISESWVE KGKSGCNTFK YKLVRQPGQP PAFGFWKSVQ KWKEGLTTRP GLILPDLTSG AESKPVSLVN
401: DVDEDKGPAY FTYTSSLKYS ETFKLTQPVI GCSCSGSCSP GNHNCSCIRK NDGDLPYLNG VILVSRRPVI YECGPTCPCH ASCKNRVIQT GLKSRLEVFK
501: TRNRGWGLRS WDSLRAGSFI CEYAGEVKDN GNLRGNQEED AYVFDTSRVF NSFKWNYEPE LVDEDPSTEV PEEFNLPSPL LISAKKFGNV ARFMNHSCSP
601: NVFWQPVIRE GNGESVIHIA FFAMRHIPPM AELTYDYGIS PTSEARDESL LHGQRTCLCG SEQCRGSFG
101: PSSSSGTKRG VGRPKGTTSV KKKEKKTVAN EPNLDVQVVK KFSSDFDSGI SAAEREDGNA YLVSSVLMRF DAVRRRLSQV EFTKSATSKA AGTLMSNGVR
201: TNMKKRVGTV PGIEVGDIFF SRIEMCLVGL HMQTMAGIDY IISKAGSDEE SLATSIVSSG RYEGEAQDPE SLIYSGQGGN ADKNRQASDQ KLERGNLALE
301: NSLRKGNGVR VVRGEEDAAS KTGKIYIYDG LYSISESWVE KGKSGCNTFK YKLVRQPGQP PAFGFWKSVQ KWKEGLTTRP GLILPDLTSG AESKPVSLVN
401: DVDEDKGPAY FTYTSSLKYS ETFKLTQPVI GCSCSGSCSP GNHNCSCIRK NDGDLPYLNG VILVSRRPVI YECGPTCPCH ASCKNRVIQT GLKSRLEVFK
501: TRNRGWGLRS WDSLRAGSFI CEYAGEVKDN GNLRGNQEED AYVFDTSRVF NSFKWNYEPE LVDEDPSTEV PEEFNLPSPL LISAKKFGNV ARFMNHSCSP
601: NVFWQPVIRE GNGESVIHIA FFAMRHIPPM AELTYDYGIS PTSEARDESL LHGQRTCLCG SEQCRGSFG
Arabidopsis Description
SUVH3Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5P4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.