CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra009409.1-P	Field mustard	nucleus	92.17	84.96
CDY11319	Canola	nucleus	80.26	76.28
CDX80930	Canola	nucleus	79.12	75.31
AT5G04940.2	Thale cress	nucleus	80.42	73.58
CDX98805	Canola	nucleus	73.25	68.55
CDY04931	Canola	cytosol, extracellular, nucleus	8.48	68.42
CDY14135	Canola	nucleus	75.2	63.85
CDX70182	Canola	nucleus	92.33	55.93
CDX96449	Canola	nucleus	56.28	52.51
CDY11129	Canola	nucleus	56.77	52.02
CDX68245	Canola	nucleus	56.44	51.95
CDY61331	Canola	nucleus	56.61	51.87
CDY59935	Canola	nucleus	54.65	50.83
GSMUA_Achr5P27620_001	Banana	nucleus	37.36	37.05
Zm00001d010646_P001	Maize	plastid	38.83	36.5
EES19725	Sorghum	nucleus	40.13	36.5
Os12t0128450-00	Rice	nucleus	36.38	36.32
TraesCS1B01G378900.1	Wheat	nucleus	39.8	36.2
Os05t0490700-01	Rice	extracellular	39.64	36.16
Os11t0131600-00	Rice	nucleus	39.15	36.14
TraesCS1D01G366800.1	Wheat	nucleus	39.8	36.09
Zm00001d038541_P002	Maize	nucleus	40.62	35.98
TraesCS1A01G362000.1	Wheat	nucleus	39.64	35.95
TraesCS1D01G307700.1	Wheat	nucleus	38.99	35.46
TraesCS1B01G319000.1	Wheat	nucleus	38.83	35.31
TraesCS1A01G308300.1	Wheat	nucleus	38.83	35.31
TraesCS5A01G140500.1	Wheat	nucleus	38.5	34.6
TraesCS5D01G152000.1	Wheat	nucleus	38.83	34.59
TraesCS4B01G280000.1	Wheat	nucleus	40.29	34.07
TraesCS5B01G138800.1	Wheat	nucleus	38.83	33.52
Zm00001d041005_P001	Maize	nucleus	37.85	33.19
Os01t0811300-01	Rice	nucleus, plasma membrane	39.64	33.02
TraesCS3A01G336100.1	Wheat	nucleus	39.97	32.89
TraesCS3B01G366900.1	Wheat	nucleus	39.64	32.71
TraesCS3B01G367200.1	Wheat	nucleus	39.64	32.71
TraesCS3A01G385200.1	Wheat	plastid	38.66	32.64
EES01635	Sorghum	nucleus	39.48	32.61
TraesCS3D01G329100.1	Wheat	nucleus	39.48	32.57
Os11t0602200-01	Rice	nucleus	42.9	32.35
TraesCS4D01G278500.1	Wheat	nucleus	43.07	32.23
EER96081	Sorghum	nucleus	43.56	32.17
OQU78645	Sorghum	nucleus	38.99	32.04
EES10399	Sorghum	nucleus	42.74	31.99
TraesCS4A01G023500.1	Wheat	nucleus	43.39	31.89
Zm00001d019195_P001	Maize	nucleus	43.56	31.19
TraesCS3B01G417400.1	Wheat	nucleus	42.25	31.09
CDY26218	Canola	nucleus	35.24	30.95
Zm00001d043135_P003	Maize	nucleus	38.5	30.3
CDY66122	Canola	nucleus	35.07	30.11
TraesCS3D01G378200.1	Wheat	plastid	33.28	29.78
CDY56214	Canola	nucleus	37.03	28.63
CDX73506	Canola	nucleus	29.36	28.44
CDX78210	Canola	nucleus	29.04	28.21
CDY17156	Canola	nucleus	25.77	27.92
CDY19475	Canola	nucleus	24.8	27.54
CDY23755	Canola	nucleus	27.08	26.06
CDY28970	Canola	cytosol	10.6	26.0
CDY37735	Canola	nucleus, plastid	26.75	25.75
CDX70530	Canola	nucleus	24.8	25.21
CDX78549	Canola	nucleus	24.63	25.0
CDY26221	Canola	nucleus	36.05	24.69
CDX84255	Canola	nucleus	28.87	24.55
CDY31670	Canola	nucleus	28.71	24.55
CDY50660	Canola	nucleus	13.38	24.4
CDY40566	Canola	cytosol, plastid	11.09	24.03
CDY51752	Canola	nucleus	13.05	23.81
CDY25627	Canola	nucleus	28.71	23.59
CDX89510	Canola	nucleus	28.87	23.35
CDY40567	Canola	mitochondrion	10.6	20.25
CDY33517	Canola	cytosol, mitochondrion, nucleus	10.44	19.28
CDX77744	Canola	cytosol	10.44	19.28
CDY28971	Canola	mitochondrion	10.6	19.01
CDY33518	Canola	nucleus	10.44	17.58
CDX74192	Canola	nucleus	13.21	17.34
CDX92067	Canola	nucleus	12.89	16.74
CDX77745	Canola	nucleus	10.28	16.36
CDY49341	Canola	nucleus	13.7	15.08
CDY14903	Canola	nucleus	14.03	13.44
CDX94744	Canola	nucleus	14.85	13.28
CDY22319	Canola	nucleus	15.17	13.19
CDY01852	Canola	plasma membrane	38.34	12.66
CDX96935	Canola	nucleus	14.85	11.61
CDY42922	Canola	plasma membrane, vacuole	15.5	11.47
CDY46064	Canola	nucleus	8.97	11.18
CDY62521	Canola	nucleus	17.13	7.69
CDY39668	Canola	nucleus	16.97	7.61
CDY15508	Canola	mitochondrion	0.0	0.0
CDX89821	Canola	cytosol	0.0	0.0
CDY18235	Canola	mitochondrion	0.0	0.0
CDY21127	Canola	cytosol	0.0	0.0
CDX86631	Canola	cytosol	0.0	0.0
CDX92068	Canola	mitochondrion	0.0	0.0
HORVU6Hr1G090170.1	Barley	cytosol	0.0	0.0
CDY53193	Canola	mitochondrion	0.0	0.0
CDY49340	Canola	cytosol	0.0	0.0
CDX74191	Canola	mitochondrion	0.0	0.0
CDY42923	Canola	mitochondrion	0.0	0.0

Protein Annotations

KEGG:00310+2.1.1.43	MapMan:12.3.3.7	MapMan:12.5.1.16.1	Gene3D:2.170.270.10	Gene3D:2.30.280.10	GO:A0A078EDC6
EnsemblPlants:CDX98804	ProteinID:CDX98804	ProteinID:CDX98804.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009987	GO:GO:0016043	GO:GO:0016571
GO:GO:0016740	GO:GO:0018024	GO:GO:0019538	GO:GO:0034968	EnsemblPlantsGene:GSBRNA2T00106898001	InterPro:Hist-Lys_N-MeTrfase_plant
InterPro:IPR001214	InterPro:IPR003105	InterPro:IPR007728	InterPro:IPR025794	InterPro:IPR036987	PFAM:PF00856
PFAM:PF02182	PFAM:PF05033	PFscan:PS50280	PFscan:PS50867	PFscan:PS51015	PFscan:PS51575
PANTHER:PTHR22884	PANTHER:PTHR22884:SF415	InterPro:PUA-like_sf	InterPro:Pre-SET_dom	InterPro:SET_dom	SMART:SM00317
SMART:SM00466	SMART:SM00468	InterPro:SRA-YDG_sf	InterPro:SRA_YDG	SUPFAM:SSF82199	SUPFAM:SSF88697
UniParc:UPI0004EE07A8	SEG:seg	:	:	:	:

Description

BnaC09g50310D

Coordinates

chrLK031907:-:72303..74950

Molecular Weight (calculated)

67760.5 Da

IEP (calculated)

6.724

GRAVY (calculated)

-0.566

Length

613 amino acids

Sequence
(BLAST)

001: MEGNFGSYTD KTRVLDIKPL RTLRPVFPSG NQAPPFVCAP PFGPFPPGFS PFYPFSSSQH TPDLNQAQNP PQHHNNNSEP SLVTPLRTFR SPNGDVEPST
101: VKRKITKKRT PLVCPENFSS GISVVDRENG NRKLVTSVVM RFDALRRRFS QLEDAKEAAS GSIKRGDLKA GSTWGETGEE PIATSIVSSG YYDNDEGNPD
201: VLVYTGQGGG NADKEKQTSD QKLERGNLAL EKSLLRNSPV RVIRGLKEAS QSAKIYVYDG LYEIKESWVE KGKLGHNTFK YKLVRAPGQP PAFASWIAIQ
301: KWKAGVPSRE GLILPDLTSG VESIGVSLVN EVDAENGPPY FTYSTTVSYS ESFKLTQQPS VGCHCSNACK PGNLDCHCIR KNGGDFPYCG NGVLVSRKGM
401: VHECSPSCPC SACKNKVTQM GVKVKLEVFK TVNRGWGLRS WDPIRAGSFI CIYAGEAKDK SKVQQTMGDD DYTFDTTRVY TPFKWNYELG LADEDGSEEM
501: SEEPELPLPL VISAKNAGNV ARFMNHSCSP NVFWQPVSYE HNGQLFLHVA FFAMSHIPPM TELTYDYGVT RPSGTQNGNT LKATSSEQLE PDDYEWNRDL
601: LNDDSFDLSL QQA

Best Arabidopsis Sequence Match ( AT1G17770.1 )
(BLAST)

001: MDKSIPIKAI PVACVRPDLV DDVTKNTSTI PTMVSPVLTN MPSATSPLLM VPPLRTIWPS NKEWYDGDAG PSSTGPIKRE ASDNTNDTAH NTFAPPPEMV
101: IPLITIRPSD DSSNYSCDAG AGPSTGPVKR GRGRPKGSKN STPTEPKKPK VYDPNSLKVT SRGNFDSEIT EAETETGNQE IVDSVMMRFD AVRRRLCQIN
201: HPEDILTTAS GNCTKMGVKT NTRRRIGAVP GIHVGDIFYY WGEMCLVGLH KSNYGGIDFF TAAESAVEGH AAMCVVTAGQ YDGETEGLDT LIYSGQGGTD
301: VYGNARDQEM KGGNLALEAS VSKGNDVRVV RGVIHPHENN QKIYIYDGMY LVSKFWTVTG KSGFKEFRFK LVRKPNQPPA YAIWKTVENL RNHDLIDSRQ
401: GFILEDLSFG AELLRVPLVN EVDEDDKTIP EDFDYIPSQC HSGMMTHEFH FDRQSLGCQN CRHQPCMHQN CTCVQRNGDL LPYHNNILVC RKPLIYECGG
501: SCPCPDHCPT RLVQTGLKLH LEVFKTRNCG WGLRSWDPIR AGTFICEFAG LRKTKEEVEE DDDYLFDTSK IYQRFRWNYE PELLLEDSWE QVSEFINLPT
601: QVLISAKEKG NVGRFMNHSC SPNVFWQPIE YENRGDVYLL IGLFAMKHIP PMTELTYDYG VSCVERSEED EVLLYKGKKT CLCGSVKCRG SFT

Arabidopsis Description

SUVH7Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH7 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5P1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.