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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • mitochondrion 1
  • plasma membrane 3
  • extracellular 2
  • endoplasmic reticulum 2
  • golgi 2
  • vacuole 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, plastid, secretory
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:plasma membrane
Predotar:plastid
PProwler:secretory
TargetP:secretory
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY56214 Canola nucleus 36.91 86.38
Bra004258.1-P Field mustard nucleus 41.0 82.81
CDY26218 Canola nucleus 21.61 57.45
CDY04931 Canola cytosol, extracellular, nucleus 2.32 56.58
CDY66122 Canola nucleus 21.66 56.3
AT1G17770.1 Thale cress nucleus 19.29 51.66
AT2G24740.1 Thale cress nucleus 19.56 48.08
CDY11129 Canola nucleus 16.76 46.49
CDX96449 Canola nucleus 16.43 46.42
CDX68245 Canola nucleus 16.65 46.4
CDY61331 Canola nucleus 16.7 46.34
CDY26221 Canola nucleus 22.31 46.26
CDY59935 Canola nucleus 16.22 45.68
CDY11319 Canola nucleus 14.82 42.64
CDX80930 Canola nucleus 14.71 42.39
CDX98805 Canola nucleus 14.55 41.22
CDY14135 Canola nucleus 15.09 38.78
CDX98804 Canola nucleus 12.66 38.34
TraesCS4B01G280000.1 Wheat nucleus 14.55 37.24
Zm00001d010646_P001 Maize plastid 12.93 36.81
Os12t0128450-00 Rice nucleus 12.18 36.81
GSMUA_Achr5P27620_001 Banana nucleus 12.18 36.57
Os05t0490700-01 Rice extracellular 13.2 36.46
Os11t0131600-00 Rice nucleus 12.72 35.54
EES10399 Sorghum nucleus 15.68 35.53
TraesCS1B01G378900.1 Wheat nucleus 12.88 35.46
TraesCS3A01G385200.1 Wheat plastid 13.85 35.4
TraesCS1D01G366800.1 Wheat nucleus 12.88 35.35
TraesCS1A01G362000.1 Wheat nucleus 12.82 35.21
TraesCS1D01G307700.1 Wheat nucleus 12.77 35.16
TraesCS1A01G308300.1 Wheat nucleus 12.77 35.16
EES19725 Sorghum nucleus 12.72 35.01
Zm00001d038541_P002 Maize nucleus 13.04 34.97
TraesCS1B01G319000.1 Wheat nucleus 12.66 34.87
TraesCS4D01G278500.1 Wheat nucleus 15.25 34.55
EER96081 Sorghum nucleus 15.41 34.46
EES01635 Sorghum nucleus 13.74 34.37
TraesCS5A01G140500.1 Wheat nucleus 12.55 34.16
TraesCS5D01G152000.1 Wheat nucleus 12.55 33.87
TraesCS4A01G023500.1 Wheat nucleus 15.19 33.81
TraesCS3B01G417400.1 Wheat nucleus 15.14 33.73
Zm00001d019195_P001 Maize nucleus 15.46 33.53
TraesCS3A01G336100.1 Wheat nucleus 13.42 33.42
Os11t0602200-01 Rice nucleus 14.6 33.33
TraesCS3D01G329100.1 Wheat nucleus 13.31 33.24
TraesCS3B01G366900.1 Wheat nucleus 13.25 33.11
TraesCS3B01G367200.1 Wheat nucleus 13.25 33.11
TraesCS5B01G138800.1 Wheat nucleus 12.66 33.1
Zm00001d041005_P001 Maize nucleus 12.45 33.05
Os01t0811300-01 Rice nucleus, plasma membrane 13.09 33.02
Zm00001d043135_P003 Maize nucleus 13.85 32.99
OQU78645 Sorghum nucleus 13.15 32.71
TraesCS3D01G378200.1 Wheat plastid 11.85 32.12
CDX78210 Canola nucleus 10.29 30.27
CDX73506 Canola nucleus 10.18 29.86
CDY28970 Canola cytosol 3.99 29.6
CDY19475 Canola nucleus 8.78 29.53
CDY17156 Canola nucleus 8.89 29.15
CDY23755 Canola nucleus 9.81 28.57
CDY37735 Canola nucleus, plastid 9.75 28.41
CDY31670 Canola nucleus 10.88 28.17
CDX84255 Canola nucleus 10.94 28.16
CDY40566 Canola cytosol, plastid 4.15 27.21
CDX70182 Canola nucleus 14.6 26.78
CDY25627 Canola nucleus 10.51 26.14
CDX89510 Canola nucleus 10.67 26.12
CDX78549 Canola nucleus 8.35 25.66
CDX70530 Canola nucleus 8.24 25.37
CDY50660 Canola nucleus 4.53 25.0
CDY51752 Canola nucleus 4.47 24.7
CDY33517 Canola cytosol, mitochondrion, nucleus 4.36 24.4
CDX77744 Canola cytosol 4.31 24.1
CDY40567 Canola mitochondrion 4.15 23.99
CDY28971 Canola mitochondrion 4.15 22.51
CDY33518 Canola nucleus 4.04 20.6
CDX77745 Canola nucleus 3.99 19.22
CDX74192 Canola nucleus 4.15 16.49
CDX92067 Canola nucleus 4.09 16.1
CDY14903 Canola nucleus 5.12 14.84
CDY49341 Canola nucleus 4.31 14.36
CDX94744 Canola nucleus 5.06 13.72
CDY22319 Canola nucleus 5.12 13.48
CDX96935 Canola nucleus 5.44 12.88
CDY46064 Canola nucleus 2.96 11.18
CDY42922 Canola plasma membrane, vacuole 4.85 10.87
CDY39668 Canola nucleus 5.98 8.13
CDY62521 Canola nucleus 5.87 7.98
CDX89821 Canola cytosol 0.05 1.23
CDX86631 Canola cytosol 0.05 1.23
CDY21127 Canola cytosol 0.05 1.23
CDY49340 Canola cytosol 0.05 1.23
CDX92068 Canola mitochondrion 0.05 0.71
CDY15508 Canola mitochondrion 0.05 0.71
CDY53193 Canola mitochondrion 0.05 0.71
CDY18235 Canola mitochondrion 0.05 0.71
CDY42923 Canola mitochondrion 0.05 0.71
CDX74191 Canola mitochondrion 0.05 0.71
Protein Annotations
KEGG:00310+2.1.1.43MapMan:12.3.3.7Gene3D:2.170.270.10Gene3D:2.30.280.10GO:A0A078EL21EnsemblPlants:CDY01852
ProteinID:CDY01852ProteinID:CDY01852.1ncoils:CoilGO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006464
GO:GO:0008150GO:GO:0008152GO:GO:0008270GO:GO:0009987GO:GO:0016043GO:GO:0016571
GO:GO:0016740GO:GO:0018024GO:GO:0019538GO:GO:0034968EnsemblPlantsGene:GSBRNA2T00113031001InterPro:Hist-Lys_N-MeTrfase_plant
InterPro:IPR001214InterPro:IPR003105InterPro:IPR003616InterPro:IPR007728InterPro:IPR025794InterPro:IPR036987
PFAM:PF00856PFAM:PF02182PFAM:PF05033PFscan:PS50280PFscan:PS50867PFscan:PS50868
PFscan:PS51015PFscan:PS51575PANTHER:PTHR22884PANTHER:PTHR22884:SF415InterPro:PUA-like_sfInterPro:Post-SET_dom
InterPro:Pre-SET_domInterPro:SET_domSMART:SM00317SMART:SM00466SMART:SM00468InterPro:SRA-YDG_sf
InterPro:SRA_YDGSUPFAM:SSF82199SUPFAM:SSF88697UniParc:UPI0004EDF58ASEG:seg:
Description
BnaC06g28920D
Coordinates
chrLK031929:+:863959..870408
Molecular Weight (calculated)
160569.0 Da
IEP (calculated)
4.323
GRAVY (calculated)
-0.371
Length
1856 amino acids
Sequence
(BLAST)
0001: MINLIDLTSS RLLTSIICCT VSSSCLFCFC QTVLPYQQKE NKLLASFWQC YXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
0101: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
0201: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
0301: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
0401: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XHKAEPPLPT LEITLPQTVD NNINNTPPPT LEVPPLPTID GEPHKAEPPL PTLEITLPQT
0501: VDNNINNTPP PTLEVPPLPT IDGEAHKTEP PLPTLEITLP QTVDNNINNT PPPTLEVPPL PTIDGEAHKT EPPLPTLEIT LPQTVDNNIN NTPPPTLEVP
0601: PLPTIDGEAH KTEPPLPTLE ITLPQTVDNN INNTPPPTLE VPPLPTIDGE AHKTEPPLPT LEITLPQTVD NNINNTPPPT LEVPPLPTID AEAYKTEPAL
0701: PTLEITLPQT VDNNINNTPP PTLEVPPLPT IDAEAYKTEP ALPTLEITLP QTVDNNINNT PPPTLEVPPL PTIDAEAHKA EPPLPTLEIT LPQTVDNNIN
0801: NTPPPTLEVP PLPTIDGEPH KAEPPLPTLE ITLPQTVDNN INNTPPPTLE VPPLPTIDGE AHKTEPPLPT LEITLPQTVD NNINNTPPPT LEVPPLPTID
0901: GEAHKTEPPL PTLEITLPQT VDNNINNTPP PTLEVPPLPT IDGEAHKTEP PLPTLEITLP QTVDNNINNT PPPTLEVPPL PTIDGEAHKT EPPLPTLEIT
1001: LPQTVDNNIN NTPPPTLEVP PLPTIDAEAY KTEPALPTLE ITLPQTVDNN INNTPPPTLE VPPLPTIDAE AYKTEPALPT LEITLPQTVD NNINNTPPPT
1101: LEVPPLPTID AEAHKAEPPL PTLEITLPQT VDNNINNTPP PTLEVPPLPT IDGEPHKAEP PLPTLEITLP QTVDNNINNT PPPTLEVPPL PTIDGEPHII
1201: EPPLPTLEIT LPQTVDNNIN NTPPPTLEVS PLPTIDGETH QAEPLLPTLE ITLLQTVDNS INNTPATPLM VSSLQAIVPY ETNKDSIAAA DGPSSGAIKR
1301: KRGRPRGSKN SKMAIKKPKP YDSNSKVVTS CPSFDTGISE AERETGNKEV ADSVLMRFDA VRRRLCQLKC FKGPLLQTAL ANCKNLGVRT NRKKRIGSIP
1401: GVNVGDIFYF WGEMSLVGLH MLMVAGIDYL TIKDGATEGP LATSVVTSGH YDDETEDTQT LIYTGHGGKI GDQELRGGNS ALKESKLKGN EVRVIRGEED
1501: PNNKGKNIYI YDGLYIVSDS WEAKGKSGFK EFKFKLLRKP DQPAGYANWK SSKNWSKCTD NSRKGLILQD LSYGAETLPV PLVNEIDEND KEMPQDFSYV
1601: NSSTCPSMTI VQNYQSTACI DCHQVQLCEG PTCICVQRNG GDLPYHNRIL VCRKPMVYEC GDMCPCPLDC HNRVTQTGLK IRVEVFKTEK CGWGLRSLEP
1701: IRAGTFICQL VGMAKRIHDV NEDDEYVFDS SRVYNQFKWN YEPELVGEDC WDQVPEAYKL RWRMVVSSKA YGNVSRFMNH SCSPNVMWQP VEYEDSRQPC
1801: VRIAFFAMKH IPPLTELRYD YGMSCRTEEV GEDGKTIFKG KKICHCGSVK CQGSFG
Best Arabidopsis Sequence Match ( AT1G17770.1 )
(BLAST)
001: MDKSIPIKAI PVACVRPDLV DDVTKNTSTI PTMVSPVLTN MPSATSPLLM VPPLRTIWPS NKEWYDGDAG PSSTGPIKRE ASDNTNDTAH NTFAPPPEMV
101: IPLITIRPSD DSSNYSCDAG AGPSTGPVKR GRGRPKGSKN STPTEPKKPK VYDPNSLKVT SRGNFDSEIT EAETETGNQE IVDSVMMRFD AVRRRLCQIN
201: HPEDILTTAS GNCTKMGVKT NTRRRIGAVP GIHVGDIFYY WGEMCLVGLH KSNYGGIDFF TAAESAVEGH AAMCVVTAGQ YDGETEGLDT LIYSGQGGTD
301: VYGNARDQEM KGGNLALEAS VSKGNDVRVV RGVIHPHENN QKIYIYDGMY LVSKFWTVTG KSGFKEFRFK LVRKPNQPPA YAIWKTVENL RNHDLIDSRQ
401: GFILEDLSFG AELLRVPLVN EVDEDDKTIP EDFDYIPSQC HSGMMTHEFH FDRQSLGCQN CRHQPCMHQN CTCVQRNGDL LPYHNNILVC RKPLIYECGG
501: SCPCPDHCPT RLVQTGLKLH LEVFKTRNCG WGLRSWDPIR AGTFICEFAG LRKTKEEVEE DDDYLFDTSK IYQRFRWNYE PELLLEDSWE QVSEFINLPT
601: QVLISAKEKG NVGRFMNHSC SPNVFWQPIE YENRGDVYLL IGLFAMKHIP PMTELTYDYG VSCVERSEED EVLLYKGKKT CLCGSVKCRG SFT
Arabidopsis Description
SUVH7Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH7 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5P1]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.